RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 TBX3O15119 743 aa13.44□□□□□ -0.26
CLCNKA-204ENST00000464764 HIP1RO75146 1068 aa13.44□□□□□ -0.26
CLCNKA-204ENST00000464764 PEX11AO75192 247 aa13.44□□□□□ -0.26
CLCNKA-204ENST00000464764 GDF11O95390 407 aa13.44□□□□□ -0.26
CLCNKA-204ENST00000464764 RRM1P23921 792 aa13.44□□□□□ -0.26
CLCNKA-204ENST00000464764 ANO7Q6IWH7 933 aa13.44□□□□□ -0.26
CLCNKA-204ENST00000464764 SLF2Q8IX21 1173 aa13.44□□□□□ -0.26
CLCNKA-204ENST00000464764 FAM13CQ8NE31 585 aa13.44□□□□□ -0.26
CLCNKA-204ENST00000464764 WHRNQ9P202 907 aa13.44□□□□□ -0.26
CLCNKA-204ENST00000464764 CORO1CQ9ULV4 474 aaPredicted RBP13.44□□□□□ -0.26
CLCNKA-204ENST00000464764 GGPS1O95749 300 aa13.43□□□□□ -0.26
CLCNKA-204ENST00000464764 GNAZP19086 355 aa13.43□□□□□ -0.26
CLCNKA-204ENST00000464764 VAMP7P51809 220 aa13.43□□□□□ -0.26
CLCNKA-204ENST00000464764 IRX1P78414 480 aaPredicted RBP13.43□□□□□ -0.26
CLCNKA-204ENST00000464764 CLUL1Q15846 466 aa13.43□□□□□ -0.26
CLCNKA-204ENST00000464764 RNF43Q68DV7 783 aa13.43□□□□□ -0.26
CLCNKA-204ENST00000464764 CDC42EP5Q6NZY7 148 aa13.43□□□□□ -0.26
CLCNKA-204ENST00000464764 MOXD1Q6UVY6 613 aa13.43□□□□□ -0.26
CLCNKA-204ENST00000464764 DAW1Q8N136 415 aa13.43□□□□□ -0.26
CLCNKA-204ENST00000464764 C7orf43Q8WVR3 580 aa13.43□□□□□ -0.26
CLCNKA-204ENST00000464764 SEMA4DQ92854 862 aa13.43□□□□□ -0.26
CLCNKA-204ENST00000464764 SNF8Q96H20 258 aa13.43□□□□□ -0.26
CLCNKA-204ENST00000464764 SBF2Q86WG5 1849 aa13.43□□□□□ -0.26
CLCNKA-204ENST00000464764 IGLV3-22A0A075B6J6 115 aa13.43□□□□□ -0.26
CLCNKA-204ENST00000464764 SPDYE5A6NIY4 337 aa13.43□□□□□ -0.26
CLCNKA-204ENST00000464764 F5H6K3 240 aa13.43□□□□□ -0.26
CLCNKA-204ENST00000464764 T-ENOLP0DO92 83 aa13.43□□□□□ -0.26
CLCNKA-204ENST00000464764 ITIH2P19823 946 aa13.43□□□□□ -0.26
CLCNKA-204ENST00000464764 FAM98CQ17RN3 349 aaKnown RBP13.43□□□□□ -0.26
CLCNKA-204ENST00000464764 SYDE2Q5VT97 1194 aa13.43□□□□□ -0.26
CLCNKA-204ENST00000464764 INTS8Q75QN2 995 aaKnown RBP13.43□□□□□ -0.26
CLCNKA-204ENST00000464764 LONP2Q86WA8 852 aa13.43□□□□□ -0.26
CLCNKA-204ENST00000464764 C4orf33Q8N1A6 199 aa13.43□□□□□ -0.26
CLCNKA-204ENST00000464764 NUMBLQ9Y6R0 609 aa13.43□□□□□ -0.26
CLCNKA-204ENST00000464764 KIF13BQ9NQT8 1826 aa13.43□□□□□ -0.26
CLCNKA-204ENST00000464764 CNTNAP4Q9C0A0 1308 aa13.43□□□□□ -0.26
CLCNKA-204ENST00000464764 GSTTP1A0A1W2PQM5 241 aa13.43□□□□□ -0.26
CLCNKA-204ENST00000464764 A6NHS1 94 aa13.43□□□□□ -0.26
CLCNKA-204ENST00000464764 FSCN2O14926 492 aa13.43□□□□□ -0.26
CLCNKA-204ENST00000464764 CFBP00751 764 aa13.43□□□□□ -0.26
CLCNKA-204ENST00000464764 CYP3A4P08684 503 aa13.43□□□□□ -0.26
CLCNKA-204ENST00000464764 DOK7Q18PE1 504 aa13.43□□□□□ -0.26
CLCNKA-204ENST00000464764 ARHGEF18Q6ZSZ5 1173 aa13.43□□□□□ -0.26
CLCNKA-204ENST00000464764 CCDC127Q96BQ5 260 aa13.43□□□□□ -0.26
CLCNKA-204ENST00000464764 NUDCD1Q96RS6 583 aa13.43□□□□□ -0.26
CLCNKA-204ENST00000464764 TBC1D10AQ9BXI6 508 aa13.43□□□□□ -0.26
CLCNKA-204ENST00000464764 ZFATQ9P243 1243 aa13.43□□□□□ -0.26
CLCNKA-204ENST00000464764 PHTF1Q9UMS5 762 aa13.43□□□□□ -0.26
CLCNKA-204ENST00000464764 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.43□□□□□ -0.26
CLCNKA-204ENST00000464764 TNRC6CQ9HCJ0 1690 aaKnown RBP13.42□□□□□ -0.26
CLCNKA-204ENST00000464764 A0A1W2PRG0 241 aa13.42□□□□□ -0.26
CLCNKA-204ENST00000464764 POC1B-GALNT4F8VUJ3 575 aa13.42□□□□□ -0.26
CLCNKA-204ENST00000464764 K7ENM7 598 aa13.42□□□□□ -0.26
CLCNKA-204ENST00000464764 TPBGLP0DKB5 382 aa13.42□□□□□ -0.26
CLCNKA-204ENST00000464764 BMP3P12645 472 aa13.42□□□□□ -0.26
CLCNKA-204ENST00000464764 ATF2P15336 505 aa13.42□□□□□ -0.26
CLCNKA-204ENST00000464764 PCK1P35558 622 aa13.42□□□□□ -0.26
CLCNKA-204ENST00000464764 GJC1P36383 396 aa13.42□□□□□ -0.26
CLCNKA-204ENST00000464764 SESN3P58005 492 aa13.42□□□□□ -0.26
CLCNKA-204ENST00000464764 BIRC2Q13490 618 aa13.42□□□□□ -0.26
CLCNKA-204ENST00000464764 RASA3Q14644 834 aa13.42□□□□□ -0.26
CLCNKA-204ENST00000464764 SLC15A2Q16348 729 aa13.42□□□□□ -0.26
CLCNKA-204ENST00000464764 GNPTABQ3T906 1256 aa13.42□□□□□ -0.26
CLCNKA-204ENST00000464764 FBF1Q8TES7 1133 aa13.42□□□□□ -0.26
CLCNKA-204ENST00000464764 CDCA7Q9BWT1 371 aaPredicted RBP13.42□□□□□ -0.26
CLCNKA-204ENST00000464764 TMEM117Q9H0C3 514 aa13.42□□□□□ -0.26
CLCNKA-204ENST00000464764 GLT8D2Q9H1C3 349 aa13.42□□□□□ -0.26
CLCNKA-204ENST00000464764 RNPEPL1Q9HAU8 725 aa13.42□□□□□ -0.26
CLCNKA-204ENST00000464764 PIDD1Q9HB75 910 aa13.42□□□□□ -0.26
CLCNKA-204ENST00000464764 ANAPC7Q9UJX3 599 aa13.42□□□□□ -0.26
CLCNKA-204ENST00000464764 SLC26A4O43511 780 aa13.42□□□□□ -0.26
CLCNKA-204ENST00000464764 FGFR1P11362 822 aa13.42□□□□□ -0.26
CLCNKA-204ENST00000464764 ADRA2BP18089 450 aa13.42□□□□□ -0.26
CLCNKA-204ENST00000464764 ATP4AP20648 1035 aa13.42□□□□□ -0.26
CLCNKA-204ENST00000464764 CALB2P22676 271 aa13.42□□□□□ -0.26
CLCNKA-204ENST00000464764 ATP2B4P23634 1241 aa13.42□□□□□ -0.26
CLCNKA-204ENST00000464764 SSTR3P32745 418 aaPredicted RBP13.42□□□□□ -0.26
CLCNKA-204ENST00000464764 GRIPAP1Q4V328 841 aa13.42□□□□□ -0.26
CLCNKA-204ENST00000464764 C15orf52Q6ZUT6 534 aaKnown RBP13.42□□□□□ -0.26
CLCNKA-204ENST00000464764 ANKS1BQ7Z6G8 1248 aa13.42□□□□□ -0.26
CLCNKA-204ENST00000464764 C12orf50Q8NA57 414 aaPredicted RBP13.42□□□□□ -0.26
CLCNKA-204ENST00000464764 GLIS1Q8NBF1 620 aa13.42□□□□□ -0.26
CLCNKA-204ENST00000464764 SLC7A6OSQ96CW6 309 aaPredicted RBP13.42□□□□□ -0.26
CLCNKA-204ENST00000464764 LRRC37BQ96QE4 947 aa13.42□□□□□ -0.26
CLCNKA-204ENST00000464764 LRRC4BQ9NT99 713 aa13.42□□□□□ -0.26
CLCNKA-204ENST00000464764 TMEM150BA6NC51 233 aa13.41□□□□□ -0.26
CLCNKA-204ENST00000464764 DDTLA6NHG4 134 aaPredicted RBP13.41□□□□□ -0.26
CLCNKA-204ENST00000464764 CYP1A2P05177 515 aa13.41□□□□□ -0.26
CLCNKA-204ENST00000464764 ATP5DP30049 168 aa13.41□□□□□ -0.26
CLCNKA-204ENST00000464764 CTCFP49711 727 aaPredicted RBP13.41□□□□□ -0.26
CLCNKA-204ENST00000464764 STRN3Q13033 797 aa13.41□□□□□ -0.26
CLCNKA-204ENST00000464764 PRR5LQ6MZQ0 368 aa13.41□□□□□ -0.26
CLCNKA-204ENST00000464764 C12orf65Q9H3J6 166 aaKnown RBP13.41□□□□□ -0.26
CLCNKA-204ENST00000464764 PSMD10O75832 226 aa13.41□□□□□ -0.26
CLCNKA-204ENST00000464764 ARP10275 920 aa13.41□□□□□ -0.26
CLCNKA-204ENST00000464764 CYP11B1P15538 503 aa13.41□□□□□ -0.26
CLCNKA-204ENST00000464764 CIITAP33076 1130 aa13.41□□□□□ -0.26
CLCNKA-204ENST00000464764 POLGP54098 1239 aaPredicted RBP13.41□□□□□ -0.26
CLCNKA-204ENST00000464764 JAG1P78504 1218 aa13.41□□□□□ -0.26
CLCNKA-204ENST00000464764 FASTKD3Q14CZ7 662 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms