RNA–Protein interactions for RNA: ENST00000463914.1

TMEM54-203, Transcript of transmembrane protein 54, humanhuman

TSL 5

Gene TMEM54, Length 606 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-203ENST00000463914 SNW1Q13573 536 aaKnown RBP11.32□□□□□ -0.6
TMEM54-203ENST00000463914 NAB2Q15742 525 aa11.32□□□□□ -0.6
TMEM54-203ENST00000463914 TMEM132AQ24JP5 1023 aa11.32□□□□□ -0.6
TMEM54-203ENST00000463914 EEF1DP3Q658K8 133 aa11.32□□□□□ -0.6
TMEM54-203ENST00000463914 NOSTRINQ8IVI9 506 aa11.32□□□□□ -0.6
TMEM54-203ENST00000463914 C1orf210Q8IVY1 113 aa11.32□□□□□ -0.6
TMEM54-203ENST00000463914 ZBTB8OSQ8IWT0 167 aa11.32□□□□□ -0.6
TMEM54-203ENST00000463914 DIS3L2Q8IYB7 885 aaKnown RBP11.32□□□□□ -0.6
TMEM54-203ENST00000463914 MAML2Q8IZL2 1156 aaPredicted RBP11.32□□□□□ -0.6
TMEM54-203ENST00000463914 DCLK2Q8N568 766 aa11.32□□□□□ -0.6
TMEM54-203ENST00000463914 ITFG1Q8TB96 612 aa11.32□□□□□ -0.6
TMEM54-203ENST00000463914 LNX1Q8TBB1 728 aaPredicted RBP11.32□□□□□ -0.6
TMEM54-203ENST00000463914 SLC7A14Q8TBB6 771 aa11.32□□□□□ -0.6
TMEM54-203ENST00000463914 ING5Q8WYH8 240 aa11.32□□□□□ -0.6
TMEM54-203ENST00000463914 MTMR9Q96QG7 549 aa11.32□□□□□ -0.6
TMEM54-203ENST00000463914 KXD1Q9BQD3 176 aa11.32□□□□□ -0.6
TMEM54-203ENST00000463914 KIFC3Q9BVG8 833 aa11.32□□□□□ -0.6
TMEM54-203ENST00000463914 SEMA4AQ9H3S1 761 aa11.32□□□□□ -0.6
TMEM54-203ENST00000463914 FZD8Q9H461 694 aa11.32□□□□□ -0.6
TMEM54-203ENST00000463914 BRMS1Q9HCU9 246 aa11.32□□□□□ -0.6
TMEM54-203ENST00000463914 PRMT7Q9NVM4 692 aaPredicted RBP11.32□□□□□ -0.6
TMEM54-203ENST00000463914 HCFC1R1Q9NWW0 138 aa11.32□□□□□ -0.6
TMEM54-203ENST00000463914 BTBD18B2RXH4 712 aa11.31□□□□□ -0.6
TMEM54-203ENST00000463914 N4BP3O15049 544 aa11.31□□□□□ -0.6
TMEM54-203ENST00000463914 JAK2O60674 1132 aa11.31□□□□□ -0.6
TMEM54-203ENST00000463914 MED24O75448 989 aa11.31□□□□□ -0.6
TMEM54-203ENST00000463914 PRKCBP05771 671 aa11.31□□□□□ -0.6
TMEM54-203ENST00000463914 HNRNPA1P09651 372 aaKnown RBP eCLIP11.31□□□□□ -0.6
TMEM54-203ENST00000463914 HOXA9P31269 272 aa11.31□□□□□ -0.6
TMEM54-203ENST00000463914 STARD6P59095 220 aa11.31□□□□□ -0.6
TMEM54-203ENST00000463914 MLF2Q15773 248 aaPredicted RBP11.31□□□□□ -0.6
TMEM54-203ENST00000463914 FAM187BQ17R55 369 aa11.31□□□□□ -0.6
TMEM54-203ENST00000463914 GLRA4Q5JXX5 417 aa11.31□□□□□ -0.6
TMEM54-203ENST00000463914 ZC3H14Q6PJT7 736 aaKnown RBP11.31□□□□□ -0.6
TMEM54-203ENST00000463914 NPAS3Q8IXF0 933 aa11.31□□□□□ -0.6
TMEM54-203ENST00000463914 NSUN7Q8NE18 718 aaKnown RBP11.31□□□□□ -0.6
TMEM54-203ENST00000463914 MCPH1Q8NEM0 835 aa11.31□□□□□ -0.6
TMEM54-203ENST00000463914 WASF1Q92558 559 aa11.31□□□□□ -0.6
TMEM54-203ENST00000463914 PRIMPOLQ96LW4 560 aa11.31□□□□□ -0.6
TMEM54-203ENST00000463914 CCDC113Q9H0I3 377 aa11.31□□□□□ -0.6
TMEM54-203ENST00000463914 GDAQ9Y2T3 454 aa11.31□□□□□ -0.6
TMEM54-203ENST00000463914 MTF2Q9Y483 593 aaPredicted RBP11.31□□□□□ -0.6
TMEM54-203ENST00000463914 ZFP37Q9Y6Q3 630 aaPredicted RBP11.31□□□□□ -0.6
TMEM54-203ENST00000463914 KANSL1LA0AUZ9 987 aa11.3□□□□□ -0.6
TMEM54-203ENST00000463914 I3L4J1 428 aa11.3□□□□□ -0.6
TMEM54-203ENST00000463914 XYLBO75191 536 aa11.3□□□□□ -0.6
TMEM54-203ENST00000463914 THP07101 528 aa11.3□□□□□ -0.6
TMEM54-203ENST00000463914 ATP2B1P20020 1258 aa11.3□□□□□ -0.6
TMEM54-203ENST00000463914 CD72P21854 359 aa11.3□□□□□ -0.6
TMEM54-203ENST00000463914 OR1D2P34982 312 aa11.3□□□□□ -0.6
TMEM54-203ENST00000463914 ELAVL2Q12926 359 aaKnown RBP11.3□□□□□ -0.6
TMEM54-203ENST00000463914 PRPF4BQ13523 1007 aaKnown RBP11.3□□□□□ -0.6
TMEM54-203ENST00000463914 UBXN2BQ14CS0 331 aa11.3□□□□□ -0.6
TMEM54-203ENST00000463914 MAPK6Q16659 721 aa11.3□□□□□ -0.6
TMEM54-203ENST00000463914 ME3Q16798 604 aa11.3□□□□□ -0.6
TMEM54-203ENST00000463914 AXDND1Q5T1B0 1012 aaPredicted RBP11.3□□□□□ -0.6
TMEM54-203ENST00000463914 RSPO2Q6UXX9 243 aaPredicted RBP11.3□□□□□ -0.6
TMEM54-203ENST00000463914 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.3□□□□□ -0.6
TMEM54-203ENST00000463914 MTSS1LQ765P7 747 aa11.3□□□□□ -0.6
TMEM54-203ENST00000463914 CATSPER3Q86XQ3 398 aa11.3□□□□□ -0.6
TMEM54-203ENST00000463914 SUMF1Q8NBK3 374 aa11.3□□□□□ -0.6
TMEM54-203ENST00000463914 GTF3C6Q969F1 213 aa11.3□□□□□ -0.6
TMEM54-203ENST00000463914 DDX27Q96GQ7 796 aaKnown RBP11.3□□□□□ -0.6
TMEM54-203ENST00000463914 DDX23Q9BUQ8 820 aaKnown RBP11.3□□□□□ -0.6
TMEM54-203ENST00000463914 GOLGA2P5Q9HBQ8 144 aa11.3□□□□□ -0.6
TMEM54-203ENST00000463914 SPATA6Q9NWH7 488 aaPredicted RBP11.3□□□□□ -0.6
TMEM54-203ENST00000463914 MTRRQ9UBK8 725 aa11.3□□□□□ -0.6
TMEM54-203ENST00000463914 CITO14578 2027 aa11.3□□□□□ -0.6
TMEM54-203ENST00000463914 COL4A2P08572 1712 aa11.29□□□□□ -0.6
TMEM54-203ENST00000463914 XRCC6P12956 609 aaKnown RBP eCLIP11.29□□□□□ -0.6
TMEM54-203ENST00000463914 FGFR3P22607 806 aa11.29□□□□□ -0.6
TMEM54-203ENST00000463914 TKTP29401 623 aaKnown RBP11.29□□□□□ -0.6
TMEM54-203ENST00000463914 MCM7P33993 719 aa11.29□□□□□ -0.6
TMEM54-203ENST00000463914 ST3GAL1Q11201 340 aa11.29□□□□□ -0.6
TMEM54-203ENST00000463914 RAB33AQ14088 237 aa11.29□□□□□ -0.6
TMEM54-203ENST00000463914 SLC5A9Q2M3M2 681 aa11.29□□□□□ -0.6
TMEM54-203ENST00000463914 PABPC1LQ4VXU2 614 aaKnown RBP11.29□□□□□ -0.6
TMEM54-203ENST00000463914 PADI6Q6TGC4 694 aa11.29□□□□□ -0.6
TMEM54-203ENST00000463914 CD300LGQ6UXG3 332 aa11.29□□□□□ -0.6
TMEM54-203ENST00000463914 DGLUCYQ7Z3D6 616 aa11.29□□□□□ -0.6
TMEM54-203ENST00000463914 C3orf58Q8NDZ4 430 aa11.29□□□□□ -0.6
TMEM54-203ENST00000463914 DEPTORQ8TB45 409 aa11.29□□□□□ -0.6
TMEM54-203ENST00000463914 RUBCNQ92622 972 aa11.29□□□□□ -0.6
TMEM54-203ENST00000463914 SHDQ96IW2 340 aa11.29□□□□□ -0.6
TMEM54-203ENST00000463914 ADPGKQ9BRR6 497 aa11.29□□□□□ -0.6
TMEM54-203ENST00000463914 C2orf40Q9H1Z8 148 aa11.29□□□□□ -0.6
TMEM54-203ENST00000463914 POLD4Q9HCU8 107 aa11.29□□□□□ -0.6
TMEM54-203ENST00000463914 TUFT1Q9NNX1 390 aa11.29□□□□□ -0.6
TMEM54-203ENST00000463914 LTB4R2Q9NPC1 389 aa11.29□□□□□ -0.6
TMEM54-203ENST00000463914 DNMT3BQ9UBC3 853 aaKnown RBP11.29□□□□□ -0.6
TMEM54-203ENST00000463914 CDY1Q9Y6F8 540 aa11.29□□□□□ -0.6
TMEM54-203ENST00000463914 F5P12259 2224 aa11.28□□□□□ -0.6
TMEM54-203ENST00000463914 PDCD11Q14690 1871 aaKnown RBP11.28□□□□□ -0.6
TMEM54-203ENST00000463914 ARHGEF35A5YM69 484 aa11.28□□□□□ -0.6
TMEM54-203ENST00000463914 FAM170BA6NMN3 283 aa11.28□□□□□ -0.6
TMEM54-203ENST00000463914 TMEM189-UBE2V1I3L0A0 370 aa11.28□□□□□ -0.6
TMEM54-203ENST00000463914 ACKR2O00590 384 aa11.28□□□□□ -0.6
TMEM54-203ENST00000463914 LAMTOR5O43504 91 aa11.28□□□□□ -0.6
TMEM54-203ENST00000463914 KINO60870 393 aaKnown RBP11.28□□□□□ -0.6
TMEM54-203ENST00000463914 B3GAT3O94766 335 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms