RNA–Protein interactions for RNA: ENST00000463705.5

CHRNA4-202, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 5,201 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-202ENST00000463705 RASSF3Q86WH2 238 aa14.23□□□□□ -0.13
CHRNA4-202ENST00000463705 ZNF668Q96K58 619 aaPredicted RBP14.23□□□□□ -0.13
CHRNA4-202ENST00000463705 TRAIPQ9BWF2 469 aa14.23□□□□□ -0.13
CHRNA4-202ENST00000463705 PRMT7Q9NVM4 692 aaPredicted RBP14.23□□□□□ -0.13
CHRNA4-202ENST00000463705 GNGT2O14610 69 aa14.23□□□□□ -0.13
CHRNA4-202ENST00000463705 RAD9BQ6WBX8 426 aa14.23□□□□□ -0.13
CHRNA4-202ENST00000463705 FRA10AC1Q70Z53 315 aa14.23□□□□□ -0.13
CHRNA4-202ENST00000463705 ARHGEF28Q8N1W1 1705 aaKnown RBP14.23□□□□□ -0.13
CHRNA4-202ENST00000463705 AFG1LQ8WV93 481 aa14.23□□□□□ -0.13
CHRNA4-202ENST00000463705 TMEM143Q96AN5 459 aa14.23□□□□□ -0.13
CHRNA4-202ENST00000463705 EPAS1Q99814 870 aa14.23□□□□□ -0.13
CHRNA4-202ENST00000463705 SLC38A7Q9NVC3 462 aa14.23□□□□□ -0.13
CHRNA4-202ENST00000463705 TRIM33Q9UPN9 1127 aa14.23□□□□□ -0.13
CHRNA4-202ENST00000463705 APOBEC2Q9Y235 224 aaKnown RBP14.23□□□□□ -0.13
CHRNA4-202ENST00000463705 HBP1O60381 514 aa14.23□□□□□ -0.13
CHRNA4-202ENST00000463705 KRT17Q04695 432 aa14.23□□□□□ -0.13
CHRNA4-202ENST00000463705 SLC15A2Q16348 729 aa14.23□□□□□ -0.13
CHRNA4-202ENST00000463705 GIPC2Q8TF65 315 aa14.23□□□□□ -0.13
CHRNA4-202ENST00000463705 PPCSQ9HAB8 311 aa14.23□□□□□ -0.13
CHRNA4-202ENST00000463705 FIS1Q9Y3D6 152 aa14.23□□□□□ -0.13
CHRNA4-202ENST00000463705 GMCL1P1Q8NEA9 526 aa14.22□□□□□ -0.13
CHRNA4-202ENST00000463705 MED15Q96RN5 788 aa14.22□□□□□ -0.13
CHRNA4-202ENST00000463705 UPF3AQ9H1J1 476 aaKnown RBP14.22□□□□□ -0.13
CHRNA4-202ENST00000463705 INTUQ9ULD6 942 aa14.22□□□□□ -0.13
CHRNA4-202ENST00000463705 AGAP1Q9UPQ3 857 aa14.22□□□□□ -0.13
CHRNA4-202ENST00000463705 SNX2O60749 519 aa14.22□□□□□ -0.13
CHRNA4-202ENST00000463705 GYPCP04921 128 aa14.22□□□□□ -0.13
CHRNA4-202ENST00000463705 DPEP1P16444 411 aa14.22□□□□□ -0.13
CHRNA4-202ENST00000463705 MAGOHP61326 146 aaKnown RBP14.22□□□□□ -0.13
CHRNA4-202ENST00000463705 MDM2Q00987 491 aaPredicted RBP14.22□□□□□ -0.13
CHRNA4-202ENST00000463705 YWHAHQ04917 246 aaPredicted RBP14.22□□□□□ -0.13
CHRNA4-202ENST00000463705 AP1B1Q10567 949 aa14.22□□□□□ -0.13
CHRNA4-202ENST00000463705 VEPH1Q14D04 833 aa14.22□□□□□ -0.13
CHRNA4-202ENST00000463705 WDR72Q3MJ13 1102 aa14.22□□□□□ -0.13
CHRNA4-202ENST00000463705 RBBP8NLQ8NC74 664 aaPredicted RBP14.22□□□□□ -0.13
CHRNA4-202ENST00000463705 SLC35G2Q8TBE7 412 aa14.22□□□□□ -0.13
CHRNA4-202ENST00000463705 PPWD1Q96BP3 646 aaKnown RBP14.22□□□□□ -0.13
CHRNA4-202ENST00000463705 SUN2Q9UH99 717 aa14.22□□□□□ -0.13
CHRNA4-202ENST00000463705 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.22□□□□□ -0.13
CHRNA4-202ENST00000463705 SPDYE2BA6NHP3 402 aa14.22□□□□□ -0.13
CHRNA4-202ENST00000463705 CLGNO14967 610 aa14.22□□□□□ -0.13
CHRNA4-202ENST00000463705 MAP3K7O43318 606 aa14.22□□□□□ -0.13
CHRNA4-202ENST00000463705 TMEM253P0C7T8 217 aa14.22□□□□□ -0.13
CHRNA4-202ENST00000463705 SPDYE6P0CI01 402 aa14.22□□□□□ -0.13
CHRNA4-202ENST00000463705 CASP7P55210 303 aa14.22□□□□□ -0.13
CHRNA4-202ENST00000463705 ELAC2Q9BQ52 826 aaKnown RBP14.22□□□□□ -0.13
CHRNA4-202ENST00000463705 SH2D3AQ9BRG2 576 aa14.22□□□□□ -0.13
CHRNA4-202ENST00000463705 FOXP3Q9BZS1 431 aa14.22□□□□□ -0.13
CHRNA4-202ENST00000463705 PXDNQ92626 1479 aa14.22□□□□□ -0.13
CHRNA4-202ENST00000463705 RRN3P2A6NIE6 340 aa14.22□□□□□ -0.13
CHRNA4-202ENST00000463705 TAF1CQ15572 869 aaPredicted RBP14.22□□□□□ -0.13
CHRNA4-202ENST00000463705 LRIG3Q6UXM1 1119 aa14.22□□□□□ -0.13
CHRNA4-202ENST00000463705 SCFD2Q8WU76 684 aa14.22□□□□□ -0.13
CHRNA4-202ENST00000463705 ERGIC2Q96RQ1 377 aa14.22□□□□□ -0.13
CHRNA4-202ENST00000463705 SMAPO00193 183 aa14.21□□□□□ -0.13
CHRNA4-202ENST00000463705 GALCP54803 685 aa14.21□□□□□ -0.13
CHRNA4-202ENST00000463705 NME3Q13232 169 aa14.21□□□□□ -0.13
CHRNA4-202ENST00000463705 ZBED8Q8IZ13 594 aa14.21□□□□□ -0.13
CHRNA4-202ENST00000463705 COG1Q8WTW3 980 aa14.21□□□□□ -0.13
CHRNA4-202ENST00000463705 GRAMD1AQ96CP6 724 aa14.21□□□□□ -0.13
CHRNA4-202ENST00000463705 PPP1R2P1Q96PQ5 205 aa14.21□□□□□ -0.13
CHRNA4-202ENST00000463705 VIPAS39Q9H9C1 493 aa14.21□□□□□ -0.13
CHRNA4-202ENST00000463705 ZFYVE28Q9HCC9 887 aa14.21□□□□□ -0.13
CHRNA4-202ENST00000463705 KCNH7Q9NS40 1196 aa14.21□□□□□ -0.13
CHRNA4-202ENST00000463705 LMBRD2Q68DH5 695 aaPredicted RBP14.21□□□□□ -0.13
CHRNA4-202ENST00000463705 ANKRD13AQ8IZ07 590 aa14.21□□□□□ -0.13
CHRNA4-202ENST00000463705 PLEKHA5Q9HAU0 1116 aa14.21□□□□□ -0.13
CHRNA4-202ENST00000463705 ERAP1Q9NZ08 941 aa14.21□□□□□ -0.13
CHRNA4-202ENST00000463705 TTC7AQ9ULT0 858 aaPredicted RBP14.21□□□□□ -0.13
CHRNA4-202ENST00000463705 FNDC3AQ9Y2H6 1198 aaKnown RBP14.21□□□□□ -0.13
CHRNA4-202ENST00000463705 CFAP69A5D8W1 941 aa14.21□□□□□ -0.13
CHRNA4-202ENST00000463705 UBE2Q2LH0YL09 131 aa14.21□□□□□ -0.13
CHRNA4-202ENST00000463705 ACADSBP45954 432 aa14.21□□□□□ -0.13
CHRNA4-202ENST00000463705 GPRC5AQ8NFJ5 357 aa14.21□□□□□ -0.13
CHRNA4-202ENST00000463705 SPDL1Q96EA4 605 aa14.21□□□□□ -0.13
CHRNA4-202ENST00000463705 GMCL1Q96IK5 515 aa14.21□□□□□ -0.13
CHRNA4-202ENST00000463705 TMEM39BQ9GZU3 492 aa14.21□□□□□ -0.13
CHRNA4-202ENST00000463705 PCDHB2Q9Y5E7 798 aa14.21□□□□□ -0.13
CHRNA4-202ENST00000463705 GOLGA8MH3BSY2 632 aa14.21□□□□□ -0.14
CHRNA4-202ENST00000463705 NNMTP40261 264 aa14.21□□□□□ -0.14
CHRNA4-202ENST00000463705 SULT1E1P49888 294 aa14.21□□□□□ -0.14
CHRNA4-202ENST00000463705 HSD17B4P51659 736 aa14.21□□□□□ -0.14
CHRNA4-202ENST00000463705 EIF3EP60228 445 aaKnown RBP14.21□□□□□ -0.14
CHRNA4-202ENST00000463705 VSNL1P62760 191 aa14.21□□□□□ -0.14
CHRNA4-202ENST00000463705 OCRLQ01968 901 aa14.21□□□□□ -0.14
CHRNA4-202ENST00000463705 LAMC2Q13753 1193 aa14.21□□□□□ -0.14
CHRNA4-202ENST00000463705 SEC23AQ15436 765 aa14.21□□□□□ -0.14
CHRNA4-202ENST00000463705 ATF7IP2Q5U623 682 aa14.21□□□□□ -0.14
CHRNA4-202ENST00000463705 SPATA2LQ8IUW3 424 aaPredicted RBP14.21□□□□□ -0.14
CHRNA4-202ENST00000463705 CCDC124Q96CT7 223 aaKnown RBP14.21□□□□□ -0.14
CHRNA4-202ENST00000463705 DEFB129Q9H1M3 183 aa14.21□□□□□ -0.14
CHRNA4-202ENST00000463705 MORC2Q9Y6X9 1032 aaPredicted RBP14.21□□□□□ -0.14
CHRNA4-202ENST00000463705 GMNCA6NCL1 334 aa14.2□□□□□ -0.14
CHRNA4-202ENST00000463705 CPB1P15086 417 aa14.2□□□□□ -0.14
CHRNA4-202ENST00000463705 ARSEP51690 589 aa14.2□□□□□ -0.14
CHRNA4-202ENST00000463705 SV2CQ496J9 727 aa14.2□□□□□ -0.14
CHRNA4-202ENST00000463705 PPM1NQ8N819 430 aa14.2□□□□□ -0.14
CHRNA4-202ENST00000463705 AGXT2Q9BYV1 514 aa14.2□□□□□ -0.14
CHRNA4-202ENST00000463705 HPSEQ9Y251 543 aa14.2□□□□□ -0.14
CHRNA4-202ENST00000463705 SKIP12755 728 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms