RNA–Protein interactions for RNA: ENST00000463308.1

NDUFA4-202, Transcript of NDUFA4, mitochondrial complex associated, humanhuman

TSL 2

Gene NDUFA4, Length 288 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4-202ENST00000463308 HOMER1Q86YM7 354 aa3.51□□□□□ -1.85
NDUFA4-202ENST00000463308 COLGALT2Q8IYK4 626 aa3.51□□□□□ -1.85
NDUFA4-202ENST00000463308 NXPE1Q8N323 547 aa3.51□□□□□ -1.85
NDUFA4-202ENST00000463308 SH2D3CQ8N5H7 860 aa3.51□□□□□ -1.85
NDUFA4-202ENST00000463308 RNPC3Q96LT9 517 aaKnown RBP3.51□□□□□ -1.85
NDUFA4-202ENST00000463308 UHRF1Q96T88 793 aaPredicted RBP3.51□□□□□ -1.85
NDUFA4-202ENST00000463308 PIF1Q9H611 641 aa3.51□□□□□ -1.85
NDUFA4-202ENST00000463308 SEMA4GQ9NTN9 838 aa3.51□□□□□ -1.85
NDUFA4-202ENST00000463308 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.51□□□□□ -1.85
NDUFA4-202ENST00000463308 H2AFY2Q9P0M6 372 aaPredicted RBP3.51□□□□□ -1.85
NDUFA4-202ENST00000463308 KDM1AO60341 852 aa3.5□□□□□ -1.85
NDUFA4-202ENST00000463308 CLRN1P58418 232 aa3.5□□□□□ -1.85
NDUFA4-202ENST00000463308 TP53BP2Q13625 1128 aa3.5□□□□□ -1.85
NDUFA4-202ENST00000463308 FHL1Q13642 323 aa3.5□□□□□ -1.85
NDUFA4-202ENST00000463308 UBE3CQ15386 1083 aa3.5□□□□□ -1.85
NDUFA4-202ENST00000463308 ATP2B3Q16720 1220 aa3.5□□□□□ -1.85
NDUFA4-202ENST00000463308 BMT2Q1RMZ1 405 aa3.5□□□□□ -1.85
NDUFA4-202ENST00000463308 CREB3L3Q68CJ9 461 aa3.5□□□□□ -1.85
NDUFA4-202ENST00000463308 GPRIN1Q7Z2K8 1008 aa3.5□□□□□ -1.85
NDUFA4-202ENST00000463308 FAM43AQ8N2R8 423 aa3.5□□□□□ -1.85
NDUFA4-202ENST00000463308 MSL3Q8N5Y2 521 aaKnown RBP3.5□□□□□ -1.85
NDUFA4-202ENST00000463308 RNF169Q8NCN4 708 aa3.5□□□□□ -1.85
NDUFA4-202ENST00000463308 MDM1Q8TC05 714 aa3.5□□□□□ -1.85
NDUFA4-202ENST00000463308 SNX33Q8WV41 574 aa3.5□□□□□ -1.85
NDUFA4-202ENST00000463308 CHTF18Q8WVB6 975 aa3.5□□□□□ -1.85
NDUFA4-202ENST00000463308 UBXN4Q92575 508 aa3.5□□□□□ -1.85
NDUFA4-202ENST00000463308 RNF31Q96EP0 1072 aa3.5□□□□□ -1.85
NDUFA4-202ENST00000463308 ALOXE3Q9BYJ1 711 aa3.5□□□□□ -1.85
NDUFA4-202ENST00000463308 GALNT9Q9HCQ5 603 aa3.5□□□□□ -1.85
NDUFA4-202ENST00000463308 MOCS1Q9NZB8 636 aa3.5□□□□□ -1.85
NDUFA4-202ENST00000463308 GPRC5DQ9NZD1 345 aa3.5□□□□□ -1.85
NDUFA4-202ENST00000463308 SLC17A6Q9P2U8 582 aa3.5□□□□□ -1.85
NDUFA4-202ENST00000463308 MTO1Q9Y2Z2 717 aaKnown RBP3.5□□□□□ -1.85
NDUFA4-202ENST00000463308 NOC2LQ9Y3T9 749 aaKnown RBP3.5□□□□□ -1.85
NDUFA4-202ENST00000463308 CD2APQ9Y5K6 639 aa3.5□□□□□ -1.85
NDUFA4-202ENST00000463308 FAM83GA6ND36 823 aa3.49□□□□□ -1.85
NDUFA4-202ENST00000463308 TEX33O43247 280 aa3.49□□□□□ -1.85
NDUFA4-202ENST00000463308 ERN1O75460 977 aaKnown RBP3.49□□□□□ -1.85
NDUFA4-202ENST00000463308 SPDEFO95238 335 aa3.49□□□□□ -1.85
NDUFA4-202ENST00000463308 CFIP05156 583 aa3.49□□□□□ -1.85
NDUFA4-202ENST00000463308 PTPN7P35236 360 aa3.49□□□□□ -1.85
NDUFA4-202ENST00000463308 LSSP48449 732 aa3.49□□□□□ -1.85
NDUFA4-202ENST00000463308 PER3P56645 1201 aa3.49□□□□□ -1.85
NDUFA4-202ENST00000463308 PCBP1Q15365 356 aaKnown RBP eCLIP3.49□□□□□ -1.85
NDUFA4-202ENST00000463308 AKNAD1Q5T1N1 836 aa3.49□□□□□ -1.85
NDUFA4-202ENST00000463308 CNNM4Q6P4Q7 775 aa3.49□□□□□ -1.85
NDUFA4-202ENST00000463308 ARHGEF25Q86VW2 580 aa3.49□□□□□ -1.85
NDUFA4-202ENST00000463308 SYT12Q8IV01 421 aa3.49□□□□□ -1.85
NDUFA4-202ENST00000463308 MAPKAPK5Q8IW41 473 aa3.49□□□□□ -1.85
NDUFA4-202ENST00000463308 RHOT2Q8IXI1 618 aa3.49□□□□□ -1.85
NDUFA4-202ENST00000463308 PDPRQ8NCN5 879 aa3.49□□□□□ -1.85
NDUFA4-202ENST00000463308 OR56A1Q8NGH5 318 aa3.49□□□□□ -1.85
NDUFA4-202ENST00000463308 ACTRT2Q8TDY3 377 aa3.49□□□□□ -1.85
NDUFA4-202ENST00000463308 FUBP3Q96I24 572 aaKnown RBP eCLIP3.49□□□□□ -1.85
NDUFA4-202ENST00000463308 GPR101Q96P66 508 aaPredicted RBP3.49□□□□□ -1.85
NDUFA4-202ENST00000463308 FCRL4Q96PJ5 515 aa3.49□□□□□ -1.85
NDUFA4-202ENST00000463308 WACQ9BTA9 647 aa3.49□□□□□ -1.85
NDUFA4-202ENST00000463308 ANO3Q9BYT9 981 aa3.49□□□□□ -1.85
NDUFA4-202ENST00000463308 PRSS50Q9UI38 385 aa3.49□□□□□ -1.85
NDUFA4-202ENST00000463308 MAST3O60307 1309 aa3.48□□□□□ -1.85
NDUFA4-202ENST00000463308 RPTORQ8N122 1335 aa3.48□□□□□ -1.85
NDUFA4-202ENST00000463308 CCDC151A5D8V7 595 aa3.48□□□□□ -1.85
NDUFA4-202ENST00000463308 ZNF891A8MT65 544 aaPredicted RBP3.48□□□□□ -1.85
NDUFA4-202ENST00000463308 H3BNC9 293 aa3.48□□□□□ -1.85
NDUFA4-202ENST00000463308 ELL2O00472 640 aaPredicted RBP3.48□□□□□ -1.85
NDUFA4-202ENST00000463308 TGM5O43548 720 aa3.48□□□□□ -1.85
NDUFA4-202ENST00000463308 CFBP00751 764 aa3.48□□□□□ -1.85
NDUFA4-202ENST00000463308 EGR2P11161 476 aaPredicted RBP3.48□□□□□ -1.85
NDUFA4-202ENST00000463308 ALAS1P13196 640 aa3.48□□□□□ -1.85
NDUFA4-202ENST00000463308 ECHS1P30084 290 aa3.48□□□□□ -1.85
NDUFA4-202ENST00000463308 RAP2BP61225 183 aa3.48□□□□□ -1.85
NDUFA4-202ENST00000463308 DSG1Q02413 1049 aa3.48□□□□□ -1.85
NDUFA4-202ENST00000463308 OCA2Q04671 838 aa3.48□□□□□ -1.85
NDUFA4-202ENST00000463308 TKFCQ3LXA3 575 aa3.48□□□□□ -1.85
NDUFA4-202ENST00000463308 ZBTB41Q5SVQ8 909 aa3.48□□□□□ -1.85
NDUFA4-202ENST00000463308 Q6ZNX1 250 aa3.48□□□□□ -1.85
NDUFA4-202ENST00000463308 C16orf86Q6ZW13 317 aa3.48□□□□□ -1.85
NDUFA4-202ENST00000463308 PTF1AQ7RTS3 328 aa3.48□□□□□ -1.85
NDUFA4-202ENST00000463308 LRRTM3Q86VH5 581 aa3.48□□□□□ -1.85
NDUFA4-202ENST00000463308 DHX37Q8IY37 1157 aaKnown RBP3.48□□□□□ -1.85
NDUFA4-202ENST00000463308 ASB10Q8WXI3 467 aa3.48□□□□□ -1.85
NDUFA4-202ENST00000463308 RAX2Q96IS3 184 aa3.48□□□□□ -1.85
NDUFA4-202ENST00000463308 ZNF496Q96IT1 587 aaPredicted RBP3.48□□□□□ -1.85
NDUFA4-202ENST00000463308 FDXACB1Q9BRP7 624 aaPredicted RBP3.48□□□□□ -1.85
NDUFA4-202ENST00000463308 FANCLQ9NW38 375 aa3.48□□□□□ -1.85
NDUFA4-202ENST00000463308 WWOXQ9NZC7 414 aa3.48□□□□□ -1.85
NDUFA4-202ENST00000463308 MAP3K2Q9Y2U5 619 aa3.48□□□□□ -1.85
NDUFA4-202ENST00000463308 CDY2AQ9Y6F7 541 aa3.48□□□□□ -1.85
NDUFA4-202ENST00000463308 PRSS38A1L453 326 aa3.47□□□□□ -1.85
NDUFA4-202ENST00000463308 RAP2AP10114 183 aa3.47□□□□□ -1.85
NDUFA4-202ENST00000463308 MTHFD2P13995 350 aa3.47□□□□□ -1.85
NDUFA4-202ENST00000463308 IL2RBP14784 551 aa3.47□□□□□ -1.85
NDUFA4-202ENST00000463308 POU3F2P20265 443 aaPredicted RBP3.47□□□□□ -1.85
NDUFA4-202ENST00000463308 CHN2P52757 468 aa3.47□□□□□ -1.85
NDUFA4-202ENST00000463308 CACNA2D1P54289 1103 aa3.47□□□□□ -1.85
NDUFA4-202ENST00000463308 FOXG1P55316 489 aaPredicted RBP3.47□□□□□ -1.85
NDUFA4-202ENST00000463308 FAM47AQ5JRC9 791 aa3.47□□□□□ -1.85
NDUFA4-202ENST00000463308 FAM102AQ5T9C2 384 aaPredicted RBP3.47□□□□□ -1.85
NDUFA4-202ENST00000463308 AGAP9Q5VTM2 703 aa3.47□□□□□ -1.85
NDUFA4-202ENST00000463308 TSHZ3Q63HK5 1081 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms