RNA–Protein interactions for RNA: ENST00000462743.1

HPS1-206, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-206ENST00000462743 CDH23Q9H251 3354 aa13.2□□□□□ -0.3
HPS1-206ENST00000462743 PDCD11Q14690 1871 aaKnown RBP13.19□□□□□ -0.3
HPS1-206ENST00000462743 TTC26A0AVF1 554 aa13.19□□□□□ -0.3
HPS1-206ENST00000462743 FSD2A1L4K1 749 aa13.19□□□□□ -0.3
HPS1-206ENST00000462743 TMEM189-UBE2V1I3L0A0 370 aa13.19□□□□□ -0.3
HPS1-206ENST00000462743 EIF3DO15371 548 aaKnown RBP eCLIP13.19□□□□□ -0.3
HPS1-206ENST00000462743 MEFVO15553 781 aaPredicted RBP13.19□□□□□ -0.3
HPS1-206ENST00000462743 LILRB3O75022 631 aa13.19□□□□□ -0.3
HPS1-206ENST00000462743 ZNF202O95125 648 aa13.19□□□□□ -0.3
HPS1-206ENST00000462743 GCNT3O95395 438 aa13.19□□□□□ -0.3
HPS1-206ENST00000462743 GARTP22102 1010 aa13.19□□□□□ -0.3
HPS1-206ENST00000462743 ADSSP30520 456 aa13.19□□□□□ -0.3
HPS1-206ENST00000462743 AFMP43652 599 aa13.19□□□□□ -0.3
HPS1-206ENST00000462743 ASIC1P78348 528 aa13.19□□□□□ -0.3
HPS1-206ENST00000462743 HYAL1Q12794 435 aa13.19□□□□□ -0.3
HPS1-206ENST00000462743 PSMD2Q13200 908 aa13.19□□□□□ -0.3
HPS1-206ENST00000462743 ADAM15Q13444 863 aa13.19□□□□□ -0.3
HPS1-206ENST00000462743 CUL4BQ13620 913 aa13.19□□□□□ -0.3
HPS1-206ENST00000462743 ZBTB6Q15916 424 aa13.19□□□□□ -0.3
HPS1-206ENST00000462743 STXBP4Q6ZWJ1 553 aa13.19□□□□□ -0.3
HPS1-206ENST00000462743 TMC7Q7Z402 723 aa13.19□□□□□ -0.3
HPS1-206ENST00000462743 CD302Q8IX05 232 aa13.19□□□□□ -0.3
HPS1-206ENST00000462743 MICALL1Q8N3F8 863 aa13.19□□□□□ -0.3
HPS1-206ENST00000462743 FSIP1Q8NA03 581 aa13.19□□□□□ -0.3
HPS1-206ENST00000462743 MICAL1Q8TDZ2 1067 aa13.19□□□□□ -0.3
HPS1-206ENST00000462743 HLA-CQ95604 372 aa13.19□□□□□ -0.3
HPS1-206ENST00000462743 PABPC5Q96DU9 382 aaKnown RBP13.19□□□□□ -0.3
HPS1-206ENST00000462743 DDX27Q96GQ7 796 aaKnown RBP13.19□□□□□ -0.3
HPS1-206ENST00000462743 UROC1Q96N76 676 aa13.19□□□□□ -0.3
HPS1-206ENST00000462743 VN1R3Q9BXE9 311 aa13.19□□□□□ -0.3
HPS1-206ENST00000462743 ZBP1Q9H171 429 aa13.19□□□□□ -0.3
HPS1-206ENST00000462743 SLC38A7Q9NVC3 462 aa13.19□□□□□ -0.3
HPS1-206ENST00000462743 TBC1D7Q9P0N9 293 aa13.19□□□□□ -0.3
HPS1-206ENST00000462743 THEGQ9P2T0 379 aa13.19□□□□□ -0.3
HPS1-206ENST00000462743 CPSF3Q9UKF6 684 aaKnown RBP13.19□□□□□ -0.3
HPS1-206ENST00000462743 KIAA0391O15091 583 aaKnown RBP13.18□□□□□ -0.3
HPS1-206ENST00000462743 SOD2P04179 222 aa13.18□□□□□ -0.3
HPS1-206ENST00000462743 MYBP10242 640 aa13.18□□□□□ -0.3
HPS1-206ENST00000462743 RPL9P32969 192 aaKnown RBP13.18□□□□□ -0.3
HPS1-206ENST00000462743 OR1G1P47890 313 aa13.18□□□□□ -0.3
HPS1-206ENST00000462743 CASP5P51878 434 aa13.18□□□□□ -0.3
HPS1-206ENST00000462743 SNRPFP62306 86 aaKnown RBP13.18□□□□□ -0.3
HPS1-206ENST00000462743 KCNA1Q09470 495 aa13.18□□□□□ -0.3
HPS1-206ENST00000462743 KCNC3Q14003 757 aa13.18□□□□□ -0.3
HPS1-206ENST00000462743 BMT2Q1RMZ1 405 aa13.18□□□□□ -0.3
HPS1-206ENST00000462743 FAM26FQ5R3K3 315 aa13.18□□□□□ -0.3
HPS1-206ENST00000462743 KANK3Q6NY19 840 aa13.18□□□□□ -0.3
HPS1-206ENST00000462743 DCLRE1AQ6PJP8 1040 aa13.18□□□□□ -0.3
HPS1-206ENST00000462743 TMEM184AQ6ZMB5 413 aa13.18□□□□□ -0.3
HPS1-206ENST00000462743 KRBA2Q6ZNG9 492 aa13.18□□□□□ -0.3
HPS1-206ENST00000462743 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.18□□□□□ -0.3
HPS1-206ENST00000462743 ELOA2Q8IYF1 753 aaPredicted RBP13.18□□□□□ -0.3
HPS1-206ENST00000462743 VPS52Q8N1B4 723 aa13.18□□□□□ -0.3
HPS1-206ENST00000462743 EFHBQ8N7U6 833 aa13.18□□□□□ -0.3
HPS1-206ENST00000462743 ENGASEQ8NFI3 743 aa13.18□□□□□ -0.3
HPS1-206ENST00000462743 ZMAT2Q96NC0 199 aaKnown RBP13.18□□□□□ -0.3
HPS1-206ENST00000462743 TCF25Q9BQ70 676 aa13.18□□□□□ -0.3
HPS1-206ENST00000462743 BLZF1Q9H2G9 400 aa13.18□□□□□ -0.3
HPS1-206ENST00000462743 GOLPH3LQ9H4A5 285 aa13.18□□□□□ -0.3
HPS1-206ENST00000462743 PRDM6Q9NQX0 595 aa13.18□□□□□ -0.3
HPS1-206ENST00000462743 CHST7Q9NS84 486 aa13.18□□□□□ -0.3
HPS1-206ENST00000462743 ANKFY1Q9P2R3 1169 aa13.18□□□□□ -0.3
HPS1-206ENST00000462743 TTC28Q96AY4 2481 aa13.17□□□□□ -0.3
HPS1-206ENST00000462743 GOLGA6L4A6NEF3 574 aa13.17□□□□□ -0.3
HPS1-206ENST00000462743 C2orf71A6NGG8 1288 aa13.17□□□□□ -0.3
HPS1-206ENST00000462743 PRPF6O94906 941 aaKnown RBP13.17□□□□□ -0.3
HPS1-206ENST00000462743 CXCL14O95715 111 aa13.17□□□□□ -0.3
HPS1-206ENST00000462743 LDHAP00338 332 aaKnown RBP13.17□□□□□ -0.3
HPS1-206ENST00000462743 C1RP00736 705 aa13.17□□□□□ -0.3
HPS1-206ENST00000462743 CYP3A5P20815 502 aa13.17□□□□□ -0.3
HPS1-206ENST00000462743 CASP1P29466 404 aa13.17□□□□□ -0.3
HPS1-206ENST00000462743 HOXD13P35453 343 aa13.17□□□□□ -0.3
HPS1-206ENST00000462743 LTBRP36941 435 aa13.17□□□□□ -0.3
HPS1-206ENST00000462743 MATR3P43243 847 aaKnown RBP eCLIP13.17□□□□□ -0.3
HPS1-206ENST00000462743 OSTNP61366 133 aa13.17□□□□□ -0.3
HPS1-206ENST00000462743 HSP90AA2PQ14568 343 aaPredicted RBP13.17□□□□□ -0.3
HPS1-206ENST00000462743 SMC1AQ14683 1233 aaKnown RBP13.17□□□□□ -0.3
HPS1-206ENST00000462743 ENOX2Q16206 610 aaKnown RBP13.17□□□□□ -0.3
HPS1-206ENST00000462743 DUSP6Q16828 381 aa13.17□□□□□ -0.3
HPS1-206ENST00000462743 UPP1Q16831 310 aa13.17□□□□□ -0.3
HPS1-206ENST00000462743 AAK1Q2M2I8 961 aa13.17□□□□□ -0.3
HPS1-206ENST00000462743 KIAA0319Q5VV43 1072 aa13.17□□□□□ -0.3
HPS1-206ENST00000462743 CD300LGQ6UXG3 332 aa13.17□□□□□ -0.3
HPS1-206ENST00000462743 CRELD2Q6UXH1 353 aaPredicted RBP13.17□□□□□ -0.3
HPS1-206ENST00000462743 ADGRD2Q7Z7M1 963 aa13.17□□□□□ -0.3
HPS1-206ENST00000462743 FMR1NBQ8N0W7 255 aaPredicted RBP13.17□□□□□ -0.3
HPS1-206ENST00000462743 CCDC34Q96HJ3 373 aa13.17□□□□□ -0.3
HPS1-206ENST00000462743 TIGD1Q96MW7 591 aa13.17□□□□□ -0.3
HPS1-206ENST00000462743 MSTO1Q9BUK6 570 aa13.17□□□□□ -0.3
HPS1-206ENST00000462743 HERC2P3Q9BVR0 1158 aa13.17□□□□□ -0.3
HPS1-206ENST00000462743 FGFBP2Q9BYJ0 223 aa13.17□□□□□ -0.3
HPS1-206ENST00000462743 ASB7Q9H672 318 aa13.17□□□□□ -0.3
HPS1-206ENST00000462743 TLE6Q9H808 572 aa13.17□□□□□ -0.3
HPS1-206ENST00000462743 UBE2ZQ9H832 354 aaPredicted RBP13.17□□□□□ -0.3
HPS1-206ENST00000462743 RPF1Q9H9Y2 349 aaKnown RBP13.17□□□□□ -0.3
HPS1-206ENST00000462743 ADAM28Q9UKQ2 775 aa13.17□□□□□ -0.3
HPS1-206ENST00000462743 AGO2Q9UKV8 859 aaKnown RBP13.17□□□□□ -0.3
HPS1-206ENST00000462743 SSX2IPQ9Y2D8 614 aa13.17□□□□□ -0.3
HPS1-206ENST00000462743 PRG3Q9Y2Y8 225 aaPredicted RBP13.17□□□□□ -0.3
HPS1-206ENST00000462743 ANK1P16157 1881 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms