RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 PPP1R10Q96QC0 940 aaKnown RBP20.61■□□□□ 0.89
COL9A3-203ENST00000462700 PAAF1Q9BRP4 392 aa20.61■□□□□ 0.89
COL9A3-203ENST00000462700 HERC2P3Q9BVR0 1158 aa20.61■□□□□ 0.89
COL9A3-203ENST00000462700 LRRC27Q9C0I9 530 aa20.61■□□□□ 0.89
COL9A3-203ENST00000462700 POLR2DO15514 142 aaKnown RBP20.6■□□□□ 0.89
COL9A3-203ENST00000462700 MATR3P43243 847 aaKnown RBP eCLIP20.6■□□□□ 0.89
COL9A3-203ENST00000462700 RBM10P98175 930 aaKnown RBP20.6■□□□□ 0.89
COL9A3-203ENST00000462700 KCNC3Q14003 757 aa20.6■□□□□ 0.89
COL9A3-203ENST00000462700 HSP90AA2PQ14568 343 aaPredicted RBP20.6■□□□□ 0.89
COL9A3-203ENST00000462700 PTPN14Q15678 1187 aa20.6■□□□□ 0.89
COL9A3-203ENST00000462700 PUS10Q3MIT2 529 aaKnown RBP20.6■□□□□ 0.89
COL9A3-203ENST00000462700 SEZ6Q53EL9 994 aa20.6■□□□□ 0.89
COL9A3-203ENST00000462700 PTCRAQ6ISU1 281 aaPredicted RBP20.6■□□□□ 0.89
COL9A3-203ENST00000462700 HVCN1Q96D96 273 aa20.6■□□□□ 0.89
COL9A3-203ENST00000462700 MSLNLQ96KJ4 702 aa20.6■□□□□ 0.89
COL9A3-203ENST00000462700 MRPL44Q9H9J2 332 aaKnown RBP20.6■□□□□ 0.89
COL9A3-203ENST00000462700 OLFML3Q9NRN5 406 aa20.6■□□□□ 0.89
COL9A3-203ENST00000462700 CLEC1BQ9P126 229 aa20.6■□□□□ 0.89
COL9A3-203ENST00000462700 ADAM28Q9UKQ2 775 aa20.6■□□□□ 0.89
COL9A3-203ENST00000462700 TDRD15B5MCY1 1934 aaKnown RBP20.6■□□□□ 0.89
COL9A3-203ENST00000462700 SMIM28A0A1B0GU29 152 aa20.59■□□□□ 0.89
COL9A3-203ENST00000462700 PPP1R37O75864 691 aa20.59■□□□□ 0.89
COL9A3-203ENST00000462700 CLUL1Q15846 466 aa20.59■□□□□ 0.89
COL9A3-203ENST00000462700 HERC4Q5GLZ8 1057 aaPredicted RBP20.59■□□□□ 0.89
COL9A3-203ENST00000462700 SLC39A4Q6P5W5 647 aa20.59■□□□□ 0.89
COL9A3-203ENST00000462700 TAS1R1Q7RTX1 841 aa20.59■□□□□ 0.89
COL9A3-203ENST00000462700 STRA6Q9BX79 667 aa20.59■□□□□ 0.89
COL9A3-203ENST00000462700 TRIM9Q9C026 710 aa20.59■□□□□ 0.89
COL9A3-203ENST00000462700 MAGEF1Q9HAY2 307 aa20.59■□□□□ 0.89
COL9A3-203ENST00000462700 PANK4Q9NVE7 773 aa20.59■□□□□ 0.89
COL9A3-203ENST00000462700 TBC1D7Q9P0N9 293 aa20.59■□□□□ 0.89
COL9A3-203ENST00000462700 CNTN3Q9P232 1028 aa20.59■□□□□ 0.89
COL9A3-203ENST00000462700 BARX2Q9UMQ3 279 aaPredicted RBP20.59■□□□□ 0.89
COL9A3-203ENST00000462700 MYO7AQ13402 2215 aa20.58■□□□□ 0.89
COL9A3-203ENST00000462700 GRXCR2A6NFK2 248 aa20.58■□□□□ 0.89
COL9A3-203ENST00000462700 MEFVO15553 781 aaPredicted RBP20.58■□□□□ 0.89
COL9A3-203ENST00000462700 CLASP2O75122 1294 aaKnown RBP20.58■□□□□ 0.89
COL9A3-203ENST00000462700 KIF4AO95239 1232 aa20.58■□□□□ 0.89
COL9A3-203ENST00000462700 URODP06132 367 aa20.58■□□□□ 0.89
COL9A3-203ENST00000462700 AMPD3Q01432 767 aa20.58■□□□□ 0.89
COL9A3-203ENST00000462700 FUT10Q6P4F1 479 aa20.58■□□□□ 0.89
COL9A3-203ENST00000462700 TMEM184AQ6ZMB5 413 aa20.58■□□□□ 0.89
COL9A3-203ENST00000462700 CCDC65Q8IXS2 484 aa20.58■□□□□ 0.89
COL9A3-203ENST00000462700 ZMAT2Q96NC0 199 aaKnown RBP20.58■□□□□ 0.89
COL9A3-203ENST00000462700 UHRF1Q96T88 793 aaPredicted RBP20.58■□□□□ 0.89
COL9A3-203ENST00000462700 GPR62Q9BZJ7 368 aa20.58■□□□□ 0.89
COL9A3-203ENST00000462700 MRPL17Q9NRX2 175 aaKnown RBP20.58■□□□□ 0.89
COL9A3-203ENST00000462700 CD207Q9UJ71 328 aa20.58■□□□□ 0.89
COL9A3-203ENST00000462700 FAM189A1O60320 539 aa20.57■□□□□ 0.88
COL9A3-203ENST00000462700 LILRB3O75022 631 aa20.57■□□□□ 0.88
COL9A3-203ENST00000462700 TADA2AO75478 443 aa20.57■□□□□ 0.88
COL9A3-203ENST00000462700 GCNT3O95395 438 aa20.57■□□□□ 0.88
COL9A3-203ENST00000462700 CLTAP09496 248 aa20.57■□□□□ 0.88
COL9A3-203ENST00000462700 SRGAP2BP0DMP2 458 aa20.57■□□□□ 0.88
COL9A3-203ENST00000462700 IL9P15248 144 aa20.57■□□□□ 0.88
COL9A3-203ENST00000462700 KCNE1P15382 129 aa20.57■□□□□ 0.88
COL9A3-203ENST00000462700 GLUD2P49448 558 aa20.57■□□□□ 0.88
COL9A3-203ENST00000462700 SLC10A6Q3KNW5 377 aa20.57■□□□□ 0.88
COL9A3-203ENST00000462700 ADALQ6DHV7 355 aa20.57■□□□□ 0.88
COL9A3-203ENST00000462700 LLGL2Q6P1M3 1020 aa20.57■□□□□ 0.88
COL9A3-203ENST00000462700 HASPINQ8TF76 798 aa20.57■□□□□ 0.88
COL9A3-203ENST00000462700 PYM1Q9BRP8 204 aaKnown RBP20.57■□□□□ 0.88
COL9A3-203ENST00000462700 SCAND2PQ9GZW5 306 aaPredicted RBP20.57■□□□□ 0.88
COL9A3-203ENST00000462700 KCNH3Q9ULD8 1083 aa20.57■□□□□ 0.88
COL9A3-203ENST00000462700 HCFC2Q9Y5Z7 792 aa20.57■□□□□ 0.88
COL9A3-203ENST00000462700 SF3B1O75533 1304 aaKnown RBP eCLIP20.56■□□□□ 0.888e-6■■■■■ 107
COL9A3-203ENST00000462700 A0A0B4J269 797 aa20.56■□□□□ 0.88
COL9A3-203ENST00000462700 ANKRD63C9JTQ0 380 aa20.56■□□□□ 0.88
COL9A3-203ENST00000462700 C2CD2LO14523 706 aa20.56■□□□□ 0.88
COL9A3-203ENST00000462700 OGTO15294 1046 aa20.56■□□□□ 0.88
COL9A3-203ENST00000462700 MBTPS2O43462 519 aa20.56■□□□□ 0.88
COL9A3-203ENST00000462700 CXCL8P10145 99 aa20.56■□□□□ 0.88
COL9A3-203ENST00000462700 MYBP10242 640 aa20.56■□□□□ 0.88
COL9A3-203ENST00000462700 CMA1P23946 247 aa20.56■□□□□ 0.88
COL9A3-203ENST00000462700 TNFSF9P41273 254 aa20.56■□□□□ 0.88
COL9A3-203ENST00000462700 CASP5P51878 434 aa20.56■□□□□ 0.88
COL9A3-203ENST00000462700 NUCB2P80303 420 aa20.56■□□□□ 0.88
COL9A3-203ENST00000462700 DSG1Q02413 1049 aa20.56■□□□□ 0.88
COL9A3-203ENST00000462700 SOX4Q06945 474 aaPredicted RBP20.56■□□□□ 0.88
COL9A3-203ENST00000462700 COASYQ13057 564 aa20.56■□□□□ 0.88
COL9A3-203ENST00000462700 SMAD4Q13485 552 aaKnown RBP20.56■□□□□ 0.88
COL9A3-203ENST00000462700 KYAT1Q16773 422 aa20.56■□□□□ 0.88
COL9A3-203ENST00000462700 L1TD1Q5T7N2 865 aaKnown RBP20.56■□□□□ 0.88
COL9A3-203ENST00000462700 CNNM4Q6P4Q7 775 aa20.56■□□□□ 0.88
COL9A3-203ENST00000462700 TMEM87AQ8NBN3 555 aa20.56■□□□□ 0.88
COL9A3-203ENST00000462700 UROC1Q96N76 676 aa20.56■□□□□ 0.88
COL9A3-203ENST00000462700 NECAB3Q96P71 396 aaPredicted RBP20.56■□□□□ 0.88
COL9A3-203ENST00000462700 C7orf25Q9BPX7 421 aa20.56■□□□□ 0.88
COL9A3-203ENST00000462700 MSTO1Q9BUK6 570 aa20.56■□□□□ 0.88
COL9A3-203ENST00000462700 EMILIN2Q9BXX0 1053 aa20.56■□□□□ 0.88
COL9A3-203ENST00000462700 FGFBP2Q9BYJ0 223 aa20.56■□□□□ 0.88
COL9A3-203ENST00000462700 GOLGA2P5Q9HBQ8 144 aa20.56■□□□□ 0.88
COL9A3-203ENST00000462700 CHST7Q9NS84 486 aa20.56■□□□□ 0.88
COL9A3-203ENST00000462700 SLC38A7Q9NVC3 462 aa20.56■□□□□ 0.88
COL9A3-203ENST00000462700 FAM50BQ9Y247 325 aa20.56■□□□□ 0.88
COL9A3-203ENST00000462700 SSX2IPQ9Y2D8 614 aa20.56■□□□□ 0.88
COL9A3-203ENST00000462700 PCDHB13Q9Y5F0 798 aa20.56■□□□□ 0.88
COL9A3-203ENST00000462700 TISP43B9A030 160 aa20.55■□□□□ 0.88
COL9A3-203ENST00000462700 TMEM189-UBE2V1I3L0A0 370 aa20.55■□□□□ 0.88
COL9A3-203ENST00000462700 CLCNKBP51801 687 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms