RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 RRM1P23921 792 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 GALNSP34059 522 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 SREBF1P36956 1147 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 CHRNDQ07001 517 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 RAB39AQ14964 217 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 KIAA1614Q5VZ46 1190 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 ESX1Q8N693 406 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 DCBLD1Q8N8Z6 715 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 HTRA1Q92743 480 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 GBP4Q96PP9 640 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 RSPH9Q9H1X1 276 aaPredicted RBP3.55□□□□□ -1.84
SMC4-203ENST00000462668 RGL1Q9NZL6 768 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 MARCH2Q9P0N8 246 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 DUSP13Q9UII6 198 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 LRRC14BA6NHZ5 514 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 ABHD16AO95870 558 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 TBX18O95935 607 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 MALP21145 153 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 XPAP23025 273 aaPredicted RBP3.55□□□□□ -1.84
SMC4-203ENST00000462668 SUMO3P55854 103 aaPredicted RBP3.55□□□□□ -1.84
SMC4-203ENST00000462668 NRG1Q02297 640 aaPredicted RBP3.55□□□□□ -1.84
SMC4-203ENST00000462668 ROM1Q03395 351 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 PRKG1Q13976 671 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 HEATR3Q7Z4Q2 680 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 CASKIN2Q8WXE0 1202 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 CYFIP2Q96F07 1278 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 TUBGCP5Q96RT8 1024 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 BTBD2Q9BX70 525 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 ENKD1Q9H0I2 346 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 DHX36Q9H2U1 1008 aaKnown RBP3.55□□□□□ -1.84
SMC4-203ENST00000462668 RETREG1Q9H6L5 497 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 SIDT1Q9NXL6 827 aaKnown RBP3.55□□□□□ -1.84
SMC4-203ENST00000462668 CPNE7Q9UBL6 633 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 PCDHB6Q9Y5E3 794 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 PI4K2BG5E9Z4 385 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 MASP2O00187 686 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 WNT10BO00744 389 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 AMY1AP04745 511 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 CEACAM5P06731 702 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 MYL4P12829 197 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 PRDX5P30044 214 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 TRIM28Q13263 835 aaKnown RBP3.55□□□□□ -1.84
SMC4-203ENST00000462668 ARL6IP4Q66PJ3 421 aaKnown RBP3.55□□□□□ -1.84
SMC4-203ENST00000462668 OXR1Q8N573 874 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 OR1N1Q8NGS0 311 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 SLC35A4Q96G79 324 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 CDADC1Q9BWV3 514 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 ZNF287Q9HBT7 754 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 FEM1BQ9UK73 627 aa3.55□□□□□ -1.84
SMC4-203ENST00000462668 RUSC2Q8N2Y8 1516 aa3.54□□□□□ -1.84
SMC4-203ENST00000462668 N4BP3O15049 544 aa3.54□□□□□ -1.84
SMC4-203ENST00000462668 FUCA1P04066 466 aa3.54□□□□□ -1.84
SMC4-203ENST00000462668 TXNP10599 105 aaKnown RBP3.54□□□□□ -1.84
SMC4-203ENST00000462668 GLULP15104 373 aa3.54□□□□□ -1.84
SMC4-203ENST00000462668 FBLN1P23142 703 aa3.54□□□□□ -1.84
SMC4-203ENST00000462668 POLE2P56282 527 aa3.54□□□□□ -1.84
SMC4-203ENST00000462668 MAP3K21Q5TCX8 1036 aa3.54□□□□□ -1.84
SMC4-203ENST00000462668 TMEM200BQ69YZ2 307 aa3.54□□□□□ -1.84
SMC4-203ENST00000462668 FAAH2Q6GMR7 532 aa3.54□□□□□ -1.84
SMC4-203ENST00000462668 PPP1R3BQ86XI6 285 aa3.54□□□□□ -1.84
SMC4-203ENST00000462668 TP63Q9H3D4 680 aaPredicted RBP3.54□□□□□ -1.84
SMC4-203ENST00000462668 KCMF1Q9P0J7 381 aa3.54□□□□□ -1.84
SMC4-203ENST00000462668 ZDHHC8Q9ULC8 765 aa3.54□□□□□ -1.84
SMC4-203ENST00000462668 DTNAQ9Y4J8 743 aa3.54□□□□□ -1.84
SMC4-203ENST00000462668 TK1P04183 234 aa3.54□□□□□ -1.84
SMC4-203ENST00000462668 CNPP09543 421 aaKnown RBP3.54□□□□□ -1.84
SMC4-203ENST00000462668 MC4RP32245 332 aa3.54□□□□□ -1.84
SMC4-203ENST00000462668 RGS3P49796 1198 aa3.54□□□□□ -1.84
SMC4-203ENST00000462668 TAS1R1Q7RTX1 841 aa3.54□□□□□ -1.84
SMC4-203ENST00000462668 PLEKHA5Q9HAU0 1116 aa3.54□□□□□ -1.84
SMC4-203ENST00000462668 PCDHB4Q9Y5E5 795 aa3.54□□□□□ -1.84
SMC4-203ENST00000462668 ATRNL1Q5VV63 1379 aa3.54□□□□□ -1.84
SMC4-203ENST00000462668 DYTNA2CJ06 578 aa3.54□□□□□ -1.84
SMC4-203ENST00000462668 C11orf95C9JLR9 678 aaPredicted RBP3.54□□□□□ -1.84
SMC4-203ENST00000462668 FAM229AH3BQW9 127 aa3.54□□□□□ -1.84
SMC4-203ENST00000462668 URI1O94763 535 aaPredicted RBP3.54□□□□□ -1.84
SMC4-203ENST00000462668 MLYCDO95822 493 aa3.54□□□□□ -1.84
SMC4-203ENST00000462668 ZGLP1P0C6A0 271 aa3.54□□□□□ -1.84
SMC4-203ENST00000462668 SESN2P58004 480 aaPredicted RBP3.54□□□□□ -1.84
SMC4-203ENST00000462668 CTXN1P60606 82 aa3.54□□□□□ -1.84
SMC4-203ENST00000462668 NOLC1Q14978 699 aaKnown RBP eCLIP3.54□□□□□ -1.84
SMC4-203ENST00000462668 NLRX1Q86UT6 975 aa3.54□□□□□ -1.84
SMC4-203ENST00000462668 DPF2Q92785 391 aa3.54□□□□□ -1.84
SMC4-203ENST00000462668 UBE2FQ969M7 185 aa3.54□□□□□ -1.84
SMC4-203ENST00000462668 MAELQ96JY0 434 aaKnown RBP3.54□□□□□ -1.84
SMC4-203ENST00000462668 SLC26A6Q9BXS9 759 aa3.54□□□□□ -1.84
SMC4-203ENST00000462668 MTG2Q9H4K7 406 aa3.54□□□□□ -1.84
SMC4-203ENST00000462668 TNFRSF12AQ9NP84 129 aa3.54□□□□□ -1.84
SMC4-203ENST00000462668 PRDM8Q9NQV8 689 aa3.54□□□□□ -1.84
SMC4-203ENST00000462668 ENDOD1O94919 500 aa3.53□□□□□ -1.84
SMC4-203ENST00000462668 NTRK1P04629 796 aa3.53□□□□□ -1.84
SMC4-203ENST00000462668 COPAP53621 1224 aa3.53□□□□□ -1.84
SMC4-203ENST00000462668 CYP27A1Q02318 531 aa3.53□□□□□ -1.84
SMC4-203ENST00000462668 SLC14A2Q15849 920 aa3.53□□□□□ -1.84
SMC4-203ENST00000462668 CYP27C1Q4G0S4 372 aa3.53□□□□□ -1.84
SMC4-203ENST00000462668 KHDC1Q4VXA5 237 aaKnown RBP3.53□□□□□ -1.84
SMC4-203ENST00000462668 C4orf50Q6ZRC1 276 aa3.53□□□□□ -1.84
SMC4-203ENST00000462668 BEND4Q6ZU67 534 aa3.53□□□□□ -1.84
SMC4-203ENST00000462668 SNX33Q8WV41 574 aa3.53□□□□□ -1.84
SMC4-203ENST00000462668 CLPTM1LQ96KA5 538 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms