RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 P4HBP07237 508 aaKnown RBP3.75□□□□□ -1.81
COL8A1-204ENST00000462604 RPSAP08865 295 aaKnown RBP3.75□□□□□ -1.81
COL8A1-204ENST00000462604 VIL1P09327 827 aaKnown RBP3.75□□□□□ -1.81
COL8A1-204ENST00000462604 KRT5P13647 590 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 GYS1P13807 737 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 NPR1P16066 1061 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 CHRNB2P17787 502 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 ALDH3A1P30838 453 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 GTF2H1P32780 548 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 CHKAP35790 457 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 ADCY8P40145 1251 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 MSH2P43246 934 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 KCNJ1P48048 391 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 RBM5P52756 815 aaKnown RBP eCLIP3.75□□□□□ -1.81
COL8A1-204ENST00000462604 ITGA8P53708 1063 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 BPIFB4P59827 614 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 FKBP1AP62942 108 aaKnown RBP3.75□□□□□ -1.81
COL8A1-204ENST00000462604 KCNJ2P63252 427 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 IRX1P78414 480 aaPredicted RBP3.75□□□□□ -1.81
COL8A1-204ENST00000462604 FMO1Q01740 532 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 PPP3CAQ08209 521 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 SF3A3Q12874 501 aaKnown RBP eCLIP3.75□□□□□ -1.81
COL8A1-204ENST00000462604 BNIP1Q12981 228 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 SNX1Q13596 522 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 ACVR2BQ13705 512 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 TMED2Q15363 201 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 MTFR1Q15390 333 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 SIX1Q15475 284 aaPredicted RBP3.75□□□□□ -1.81
COL8A1-204ENST00000462604 ZRSR2Q15696 482 aaKnown RBP3.75□□□□□ -1.81
COL8A1-204ENST00000462604 AOC3Q16853 763 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 LONRF1Q17RB8 773 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 DOK7Q18PE1 504 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 CLEC16AQ2KHT3 1053 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 ACCSLQ4AC99 568 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 FYB2Q5VWT5 728 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 IZUMO3Q5VZ72 239 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 NUGGCQ68CJ6 796 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 KRT39Q6A163 491 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 PPP1R2P3Q6NXS1 205 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 TATDN1Q6P1N9 297 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 CCDC174Q6PII3 467 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 RHBDF2Q6PJF5 856 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 PADI6Q6TGC4 694 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 VSTM1Q6UX27 236 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 NIPA1Q7RTP0 329 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 FAM160B2Q86V87 743 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 AMIGO3Q86WK7 504 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 VSIG1Q86XK7 387 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 ZNF677Q86XU0 584 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 KSR1Q8IVT5 923 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 APLFQ8IW19 511 aaPredicted RBP3.75□□□□□ -1.81
COL8A1-204ENST00000462604 PPM1KQ8N3J5 372 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 KIF2BQ8N4N8 673 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 TEX9Q8N6V9 391 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 MAB21L3Q8N8X9 362 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 CCDC89Q8N998 374 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 BANK1Q8NDB2 785 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 ATL2Q8NHH9 583 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 LMO3Q8TAP4 145 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 CYP2W1Q8TAV3 490 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 GDAP1Q8TB36 358 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 AGAP11Q8TF27 550 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 CHURC1Q8WUH1 139 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 NSMCE1Q8WV22 266 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 C7orf43Q8WVR3 580 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 C1orf54Q8WWF1 131 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 PSPC1Q8WXF1 523 aaKnown RBP3.75□□□□□ -1.81
COL8A1-204ENST00000462604 SHC3Q92529 594 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 DHX38Q92620 1227 aaKnown RBP3.75□□□□□ -1.81
COL8A1-204ENST00000462604 CNKSR1Q969H4 720 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 CFAP57Q96MR6 1250 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 PCDHB18PQ96TA0 734 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 DDX23Q9BUQ8 820 aaKnown RBP3.75□□□□□ -1.81
COL8A1-204ENST00000462604 MRIQ9BWK5 157 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 STRA6Q9BX79 667 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 IDI2Q9BXS1 227 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 DCLK3Q9C098 648 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 TMEM117Q9H0C3 514 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 LRMDAQ9H2I8 198 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 IKZF4Q9H2S9 585 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 BCAS3Q9H6U6 928 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 PPCSQ9HAB8 311 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 TMEM8AQ9HCN3 771 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 UBN1Q9NPG3 1134 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 AVENQ9NQS1 362 aaPredicted RBP3.75□□□□□ -1.81
COL8A1-204ENST00000462604 ARHGEF3Q9NR81 526 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 NINJ2Q9NZG7 142 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 SENP1Q9P0U3 644 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 PRKAG3Q9UGI9 489 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 ANAPC7Q9UJX3 599 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 PRR12Q9ULL5 1215 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 SMG5Q9UPR3 1016 aaKnown RBP3.75□□□□□ -1.81
COL8A1-204ENST00000462604 STK38LQ9Y2H1 464 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 STARD13Q9Y3M8 1113 aa3.75□□□□□ -1.81
COL8A1-204ENST00000462604 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.75□□□□□ -1.81
COL8A1-204ENST00000462604 COL5A3P25940 1745 aaPredicted RBP3.75□□□□□ -1.81
COL8A1-204ENST00000462604 XIRP1Q702N8 1843 aaKnown RBP3.74□□□□□ -1.81
COL8A1-204ENST00000462604 ZNF536O15090 1300 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 EXOC1LA0A1B0GW35 172 aa3.74□□□□□ -1.81
COL8A1-204ENST00000462604 KLRG2A4D1S0 409 aaPredicted RBP3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms