RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 NOL7Q9UMY1 257 aaKnown RBP8.78□□□□□ -1
CDC42BPA-210ENST00000462553 PCDHA12Q9UN75 941 aa8.78□□□□□ -1
CDC42BPA-210ENST00000462553 TICRRQ7Z2Z1 1910 aa8.78□□□□□ -1
CDC42BPA-210ENST00000462553 ANHXE9PGG2 379 aa8.77□□□□□ -1.01
CDC42BPA-210ENST00000462553 H3BQV1 296 aa8.77□□□□□ -1.01
CDC42BPA-210ENST00000462553 INO80B-WBP1J3KQ70 363 aa8.77□□□□□ -1.01
CDC42BPA-210ENST00000462553 ASAP2O43150 1006 aa8.77□□□□□ -1.01
CDC42BPA-210ENST00000462553 MARCH6O60337 910 aa8.77□□□□□ -1.01
CDC42BPA-210ENST00000462553 SRFP11831 508 aa8.77□□□□□ -1.01
CDC42BPA-210ENST00000462553 RPL17P18621 184 aaKnown RBP8.77□□□□□ -1.01
CDC42BPA-210ENST00000462553 GLRA2P23416 452 aa8.77□□□□□ -1.01
CDC42BPA-210ENST00000462553 AKAP5P24588 427 aa8.77□□□□□ -1.01
CDC42BPA-210ENST00000462553 GBP2P32456 591 aaPredicted RBP8.77□□□□□ -1.01
CDC42BPA-210ENST00000462553 ARL2P36404 184 aa8.77□□□□□ -1.01
CDC42BPA-210ENST00000462553 POU5F1BQ06416 359 aa8.77□□□□□ -1.01
CDC42BPA-210ENST00000462553 RESTQ13127 1097 aa8.77□□□□□ -1.01
CDC42BPA-210ENST00000462553 PTGDRQ13258 359 aa8.77□□□□□ -1.01
CDC42BPA-210ENST00000462553 GNL2Q13823 731 aaKnown RBP8.77□□□□□ -1.01
CDC42BPA-210ENST00000462553 MXD4Q14582 209 aaPredicted RBP8.77□□□□□ -1.01
CDC42BPA-210ENST00000462553 PCBP1Q15365 356 aaKnown RBP eCLIP8.77□□□□□ -1.01
CDC42BPA-210ENST00000462553 RTP2Q5QGT7 225 aa8.77□□□□□ -1.01
CDC42BPA-210ENST00000462553 MCTP1Q6DN14 999 aa8.77□□□□□ -1.01
CDC42BPA-210ENST00000462553 LILRA6Q6PI73 481 aa8.77□□□□□ -1.01
CDC42BPA-210ENST00000462553 GET4Q7L5D6 327 aaPredicted RBP8.77□□□□□ -1.01
CDC42BPA-210ENST00000462553 CDR2LQ86X02 465 aaPredicted RBP8.77□□□□□ -1.01
CDC42BPA-210ENST00000462553 SLC44A3Q8N4M1 653 aa8.77□□□□□ -1.01
CDC42BPA-210ENST00000462553 IGSF22Q8N9C0 903 aa8.77□□□□□ -1.01
CDC42BPA-210ENST00000462553 GPR152Q8TDT2 470 aa8.77□□□□□ -1.01
CDC42BPA-210ENST00000462553 HDAC7Q8WUI4 952 aa8.77□□□□□ -1.01
CDC42BPA-210ENST00000462553 RABGGTAQ92696 567 aa8.77□□□□□ -1.01
CDC42BPA-210ENST00000462553 INTS4Q96HW7 963 aaKnown RBP8.77□□□□□ -1.01
CDC42BPA-210ENST00000462553 PAAF1Q9BRP4 392 aa8.77□□□□□ -1.01
CDC42BPA-210ENST00000462553 APOL6Q9BWW8 343 aa8.77□□□□□ -1.01
CDC42BPA-210ENST00000462553 NFKBIZQ9BYH8 718 aa8.77□□□□□ -1.01
CDC42BPA-210ENST00000462553 NT5C3AQ9H0P0 336 aa8.77□□□□□ -1.01
CDC42BPA-210ENST00000462553 CXCL16Q9H2A7 254 aa8.77□□□□□ -1.01
CDC42BPA-210ENST00000462553 TBC1D17Q9HA65 648 aa8.77□□□□□ -1.01
CDC42BPA-210ENST00000462553 ZDHHC7Q9NXF8 308 aa8.77□□□□□ -1.01
CDC42BPA-210ENST00000462553 FNIP2Q9P278 1114 aa8.77□□□□□ -1.01
CDC42BPA-210ENST00000462553 FBXW11Q9UKB1 542 aa8.77□□□□□ -1.01
CDC42BPA-210ENST00000462553 CIZ1Q9ULV3 898 aaPredicted RBP8.77□□□□□ -1.01
CDC42BPA-210ENST00000462553 CA14Q9ULX7 337 aa8.77□□□□□ -1.01
CDC42BPA-210ENST00000462553 SSX2IPQ9Y2D8 614 aa8.77□□□□□ -1.01
CDC42BPA-210ENST00000462553 GIT1Q9Y2X7 761 aa8.77□□□□□ -1.01
CDC42BPA-210ENST00000462553 ANK1P16157 1881 aa8.77□□□□□ -1.01
CDC42BPA-210ENST00000462553 MAP1BP46821 2468 aaKnown RBP8.76□□□□□ -1.01
CDC42BPA-210ENST00000462553 PTGESO14684 152 aa8.76□□□□□ -1.01
CDC42BPA-210ENST00000462553 NPTXRO95502 500 aa8.76□□□□□ -1.01
CDC42BPA-210ENST00000462553 C1RP00736 705 aa8.76□□□□□ -1.01
CDC42BPA-210ENST00000462553 EDN1P05305 212 aa8.76□□□□□ -1.01
CDC42BPA-210ENST00000462553 GLULP15104 373 aa8.76□□□□□ -1.01
CDC42BPA-210ENST00000462553 SYT1P21579 422 aa8.76□□□□□ -1.01
CDC42BPA-210ENST00000462553 RARRES1P49788 294 aa8.76□□□□□ -1.01
CDC42BPA-210ENST00000462553 ATP2C1P98194 919 aaPredicted RBP8.76□□□□□ -1.01
CDC42BPA-210ENST00000462553 FOXK2Q01167 660 aa8.76□□□□□ -1.01
CDC42BPA-210ENST00000462553 GRIK3Q13003 919 aa8.76□□□□□ -1.01
CDC42BPA-210ENST00000462553 LARP1BQ659C4 914 aaKnown RBP8.76□□□□□ -1.01
CDC42BPA-210ENST00000462553 CDCA2Q69YH5 1023 aaPredicted RBP8.76□□□□□ -1.01
CDC42BPA-210ENST00000462553 SLC27A1Q6PCB7 646 aa8.76□□□□□ -1.01
CDC42BPA-210ENST00000462553 PRSS55Q6UWB4 352 aaPredicted RBP8.76□□□□□ -1.01
CDC42BPA-210ENST00000462553 OTUD6AQ7L8S5 288 aa8.76□□□□□ -1.01
CDC42BPA-210ENST00000462553 CATSPER3Q86XQ3 398 aa8.76□□□□□ -1.01
CDC42BPA-210ENST00000462553 PALB2Q86YC2 1186 aa8.76□□□□□ -1.01
CDC42BPA-210ENST00000462553 GLYCTKQ8IVS8 523 aa8.76□□□□□ -1.01
CDC42BPA-210ENST00000462553 TPH2Q8IWU9 490 aa8.76□□□□□ -1.01
CDC42BPA-210ENST00000462553 GPR65Q8IYL9 337 aa8.76□□□□□ -1.01
CDC42BPA-210ENST00000462553 ST13P5Q8NFI4 369 aaPredicted RBP8.76□□□□□ -1.01
CDC42BPA-210ENST00000462553 STAMQ92783 540 aa8.76□□□□□ -1.01
CDC42BPA-210ENST00000462553 POLR3CQ9BUI4 534 aaPredicted RBP8.76□□□□□ -1.01
CDC42BPA-210ENST00000462553 PRKD2Q9BZL6 878 aa8.76□□□□□ -1.01
CDC42BPA-210ENST00000462553 PLEKHA4Q9H4M7 779 aa8.76□□□□□ -1.01
CDC42BPA-210ENST00000462553 TUFT1Q9NNX1 390 aa8.76□□□□□ -1.01
CDC42BPA-210ENST00000462553 ARHGEF3Q9NR81 526 aa8.76□□□□□ -1.01
CDC42BPA-210ENST00000462553 SLC2A4RGQ9NR83 387 aa8.76□□□□□ -1.01
CDC42BPA-210ENST00000462553 ADAM28Q9UKQ2 775 aa8.76□□□□□ -1.01
CDC42BPA-210ENST00000462553 MTMR6Q9Y217 621 aa8.76□□□□□ -1.01
CDC42BPA-210ENST00000462553 NUMBLQ9Y6R0 609 aa8.76□□□□□ -1.01
CDC42BPA-210ENST00000462553 CFAP47Q6ZTR5 3102 aa8.76□□□□□ -1.01
CDC42BPA-210ENST00000462553 A0A087WWV3 80 aa8.75□□□□□ -1.01
CDC42BPA-210ENST00000462553 A0A1B0GUA9 196 aa8.75□□□□□ -1.01
CDC42BPA-210ENST00000462553 VPS37CA5D8V6 355 aaPredicted RBP8.75□□□□□ -1.01
CDC42BPA-210ENST00000462553 PP2D1A8MPX8 630 aa8.75□□□□□ -1.01
CDC42BPA-210ENST00000462553 ZMYND10O75800 440 aa8.75□□□□□ -1.01
CDC42BPA-210ENST00000462553 DGAT1O75907 488 aa8.75□□□□□ -1.01
CDC42BPA-210ENST00000462553 KIF4AO95239 1232 aa8.75□□□□□ -1.01
CDC42BPA-210ENST00000462553 LAMP2P13473 410 aa8.75□□□□□ -1.01
CDC42BPA-210ENST00000462553 RPA1P27694 616 aa8.75□□□□□ -1.01
CDC42BPA-210ENST00000462553 PRPHP41219 470 aa8.75□□□□□ -1.01
CDC42BPA-210ENST00000462553 ID4P47928 161 aa8.75□□□□□ -1.01
CDC42BPA-210ENST00000462553 TFDP1Q14186 410 aa8.75□□□□□ -1.01
CDC42BPA-210ENST00000462553 HSP90AA2PQ14568 343 aaPredicted RBP8.75□□□□□ -1.01
CDC42BPA-210ENST00000462553 NAB2Q15742 525 aa8.75□□□□□ -1.01
CDC42BPA-210ENST00000462553 USP41Q3LFD5 358 aa8.75□□□□□ -1.01
CDC42BPA-210ENST00000462553 RILPL1Q5EBL4 403 aa8.75□□□□□ -1.01
CDC42BPA-210ENST00000462553 PHLDB3Q6NSJ2 640 aa8.75□□□□□ -1.01
CDC42BPA-210ENST00000462553 ELMSAN1Q6PJG2 1045 aa8.75□□□□□ -1.01
CDC42BPA-210ENST00000462553 ERMP1Q7Z2K6 904 aa8.75□□□□□ -1.01
CDC42BPA-210ENST00000462553 BRAPQ7Z569 592 aa8.75□□□□□ -1.01
CDC42BPA-210ENST00000462553 PIGOQ8TEQ8 1089 aa8.75□□□□□ -1.01
CDC42BPA-210ENST00000462553 HASPINQ8TF76 798 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms