RNA–Protein interactions for RNA: ENST00000462537.3

CDKN1A-206, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 3

Gene CDKN1A, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-206ENST00000462537 GRXCR2A6NFK2 248 aa20.25■□□□□ 0.83
CDKN1A-206ENST00000462537 TADA2AO75478 443 aa20.25■□□□□ 0.83
CDKN1A-206ENST00000462537 GTF2BQ00403 316 aa20.25■□□□□ 0.83
CDKN1A-206ENST00000462537 MCL1Q07820 350 aa20.25■□□□□ 0.83
CDKN1A-206ENST00000462537 PTPN14Q15678 1187 aa20.25■□□□□ 0.83
CDKN1A-206ENST00000462537 KIAA1841Q6NSI8 718 aa20.25■□□□□ 0.83
CDKN1A-206ENST00000462537 IQUBQ8NA54 791 aa20.25■□□□□ 0.83
CDKN1A-206ENST00000462537 HASPINQ8TF76 798 aa20.25■□□□□ 0.83
CDKN1A-206ENST00000462537 SNX27Q96L92 541 aa20.25■□□□□ 0.83
CDKN1A-206ENST00000462537 SPATA32Q96LK8 384 aa20.25■□□□□ 0.83
CDKN1A-206ENST00000462537 FIZ1Q96SL8 496 aa20.25■□□□□ 0.83
CDKN1A-206ENST00000462537 LRRC27Q9C0I9 530 aa20.25■□□□□ 0.83
CDKN1A-206ENST00000462537 TBC1D7Q9P0N9 293 aa20.25■□□□□ 0.83
CDKN1A-206ENST00000462537 SEL1LQ9UBV2 794 aa20.25■□□□□ 0.83
CDKN1A-206ENST00000462537 RCOR1Q9UKL0 485 aa20.25■□□□□ 0.83
CDKN1A-206ENST00000462537 ATP6V1DQ9Y5K8 247 aa20.25■□□□□ 0.83
CDKN1A-206ENST00000462537 IRAK3Q9Y616 596 aa20.25■□□□□ 0.83
CDKN1A-206ENST00000462537 CITO14578 2027 aa20.25■□□□□ 0.83
CDKN1A-206ENST00000462537 SMIM28A0A1B0GU29 152 aa20.24■□□□□ 0.83
CDKN1A-206ENST00000462537 CLASP2O75122 1294 aaKnown RBP20.24■□□□□ 0.83
CDKN1A-206ENST00000462537 GLUD2P49448 558 aa20.24■□□□□ 0.83
CDKN1A-206ENST00000462537 SMAD4Q13485 552 aaKnown RBP20.24■□□□□ 0.83
CDKN1A-206ENST00000462537 NAB2Q15742 525 aa20.24■□□□□ 0.83
CDKN1A-206ENST00000462537 E2F4Q16254 413 aa20.24■□□□□ 0.83
CDKN1A-206ENST00000462537 HERC4Q5GLZ8 1057 aaPredicted RBP20.24■□□□□ 0.83
CDKN1A-206ENST00000462537 RESP18Q5W5W9 173 aa20.24■□□□□ 0.83
CDKN1A-206ENST00000462537 FUT10Q6P4F1 479 aa20.24■□□□□ 0.83
CDKN1A-206ENST00000462537 TAS1R1Q7RTX1 841 aa20.24■□□□□ 0.83
CDKN1A-206ENST00000462537 MAP4K3Q8IVH8 894 aa20.24■□□□□ 0.83
CDKN1A-206ENST00000462537 KCNN1Q92952 543 aa20.24■□□□□ 0.83
CDKN1A-206ENST00000462537 CHAMP1Q96JM3 812 aa20.24■□□□□ 0.83
CDKN1A-206ENST00000462537 MSLNLQ96KJ4 702 aa20.24■□□□□ 0.83
CDKN1A-206ENST00000462537 PPP1R10Q96QC0 940 aaKnown RBP20.24■□□□□ 0.83
CDKN1A-206ENST00000462537 EMILIN2Q9BXX0 1053 aa20.24■□□□□ 0.83
CDKN1A-206ENST00000462537 TNMDQ9H2S6 317 aa20.24■□□□□ 0.83
CDKN1A-206ENST00000462537 PANK4Q9NVE7 773 aa20.24■□□□□ 0.83
CDKN1A-206ENST00000462537 POLR2DO15514 142 aaKnown RBP20.23■□□□□ 0.83
CDKN1A-206ENST00000462537 MBTPS2O43462 519 aa20.23■□□□□ 0.83
CDKN1A-206ENST00000462537 AMPD3Q01432 767 aa20.23■□□□□ 0.83
CDKN1A-206ENST00000462537 COASYQ13057 564 aa20.23■□□□□ 0.83
CDKN1A-206ENST00000462537 ZNF720Q7Z2F6 126 aa20.23■□□□□ 0.83
CDKN1A-206ENST00000462537 CASP10Q92851 521 aa20.23■□□□□ 0.83
CDKN1A-206ENST00000462537 HAPLN2Q9GZV7 340 aa20.23■□□□□ 0.83
CDKN1A-206ENST00000462537 ST6GALNAC4Q9H4F1 302 aa20.23■□□□□ 0.83
CDKN1A-206ENST00000462537 SSX2IPQ9Y2D8 614 aa20.23■□□□□ 0.83
CDKN1A-206ENST00000462537 HCFC2Q9Y5Z7 792 aa20.23■□□□□ 0.83
CDKN1A-206ENST00000462537 SF3B1O75533 1304 aaKnown RBP eCLIP20.23■□□□□ 0.839e-6■■■■■ 68.9
CDKN1A-206ENST00000462537 KIF4AO95239 1232 aa20.22■□□□□ 0.83
CDKN1A-206ENST00000462537 GCNT3O95395 438 aa20.22■□□□□ 0.83
CDKN1A-206ENST00000462537 PIGRP01833 764 aa20.22■□□□□ 0.83
CDKN1A-206ENST00000462537 KLRC2P26717 231 aa20.22■□□□□ 0.83
CDKN1A-206ENST00000462537 USP41Q3LFD5 358 aa20.22■□□□□ 0.83
CDKN1A-206ENST00000462537 ALKAL1Q6UXT8 129 aa20.22■□□□□ 0.83
CDKN1A-206ENST00000462537 CCDC65Q8IXS2 484 aa20.22■□□□□ 0.83
CDKN1A-206ENST00000462537 LEO1Q8WVC0 666 aaPredicted RBP20.22■□□□□ 0.83
CDKN1A-206ENST00000462537 HVCN1Q96D96 273 aa20.22■□□□□ 0.83
CDKN1A-206ENST00000462537 B3GALT6Q96L58 329 aa20.22■□□□□ 0.83
CDKN1A-206ENST00000462537 UROC1Q96N76 676 aa20.22■□□□□ 0.83
CDKN1A-206ENST00000462537 MSTO1Q9BUK6 570 aa20.22■□□□□ 0.83
CDKN1A-206ENST00000462537 GPR62Q9BZJ7 368 aa20.22■□□□□ 0.83
CDKN1A-206ENST00000462537 GOLGA2P5Q9HBQ8 144 aa20.22■□□□□ 0.83
CDKN1A-206ENST00000462537 SLC38A7Q9NVC3 462 aa20.22■□□□□ 0.83
CDKN1A-206ENST00000462537 KBTBD4Q9NVX7 518 aa20.22■□□□□ 0.83
CDKN1A-206ENST00000462537 CNTN3Q9P232 1028 aa20.22■□□□□ 0.83
CDKN1A-206ENST00000462537 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.21■□□□□ 0.83
CDKN1A-206ENST00000462537 SPDYE4A6NLX3 237 aa20.21■□□□□ 0.83
CDKN1A-206ENST00000462537 TNFRSF10AO00220 468 aa20.21■□□□□ 0.83
CDKN1A-206ENST00000462537 CLTAP09496 248 aa20.21■□□□□ 0.83
CDKN1A-206ENST00000462537 CXCL8P10145 99 aa20.21■□□□□ 0.83
CDKN1A-206ENST00000462537 CLCNKBP51801 687 aa20.21■□□□□ 0.83
CDKN1A-206ENST00000462537 ASIC1P78348 528 aa20.21■□□□□ 0.83
CDKN1A-206ENST00000462537 KCNC3Q14003 757 aa20.21■□□□□ 0.83
CDKN1A-206ENST00000462537 XKR4Q5GH76 650 aa20.21■□□□□ 0.83
CDKN1A-206ENST00000462537 ANKRD54Q6NXT1 300 aa20.21■□□□□ 0.83
CDKN1A-206ENST00000462537 TMEM184AQ6ZMB5 413 aa20.21■□□□□ 0.83
CDKN1A-206ENST00000462537 PPFIBP1Q86W92 1011 aa20.21■□□□□ 0.83
CDKN1A-206ENST00000462537 RNF168Q8IYW5 571 aaPredicted RBP20.21■□□□□ 0.83
CDKN1A-206ENST00000462537 SMRP1Q8NCR6 262 aa20.21■□□□□ 0.83
CDKN1A-206ENST00000462537 KLHL5Q96PQ7 755 aa20.21■□□□□ 0.83
CDKN1A-206ENST00000462537 APOL5Q9BWW9 433 aa20.21■□□□□ 0.83
CDKN1A-206ENST00000462537 OLFML3Q9NRN5 406 aa20.21■□□□□ 0.83
CDKN1A-206ENST00000462537 EXOC7Q9UPT5 735 aa20.21■□□□□ 0.83
CDKN1A-206ENST00000462537 PDCD11Q14690 1871 aaKnown RBP20.21■□□□□ 0.83
CDKN1A-206ENST00000462537 FRMD3A2A2Y4 597 aa20.2■□□□□ 0.82
CDKN1A-206ENST00000462537 ANKRD63C9JTQ0 380 aa20.2■□□□□ 0.82
CDKN1A-206ENST00000462537 OGTO15294 1046 aa20.2■□□□□ 0.82
CDKN1A-206ENST00000462537 EFEMP2O95967 443 aa20.2■□□□□ 0.82
CDKN1A-206ENST00000462537 CNPP09543 421 aaKnown RBP20.2■□□□□ 0.82
CDKN1A-206ENST00000462537 MYBP10242 640 aa20.2■□□□□ 0.82
CDKN1A-206ENST00000462537 KCNE1P15382 129 aa20.2■□□□□ 0.82
CDKN1A-206ENST00000462537 EPCAMP16422 314 aa20.2■□□□□ 0.82
CDKN1A-206ENST00000462537 TNFSF9P41273 254 aa20.2■□□□□ 0.82
CDKN1A-206ENST00000462537 DSG1Q02413 1049 aa20.2■□□□□ 0.82
CDKN1A-206ENST00000462537 PPP2R3AQ06190 1150 aa20.2■□□□□ 0.82
CDKN1A-206ENST00000462537 SMAD2Q15796 467 aaKnown RBP20.2■□□□□ 0.82
CDKN1A-206ENST00000462537 KYAT1Q16773 422 aa20.2■□□□□ 0.82
CDKN1A-206ENST00000462537 SLC10A6Q3KNW5 377 aa20.2■□□□□ 0.82
CDKN1A-206ENST00000462537 TPRNQ4KMQ1 711 aa20.2■□□□□ 0.82
CDKN1A-206ENST00000462537 KIAA0319Q5VV43 1072 aa20.2■□□□□ 0.82
CDKN1A-206ENST00000462537 SLC39A4Q6P5W5 647 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms