RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 MAPK4P31152 587 aa18.14■□□□□ 0.49
ACTB-207ENST00000462494 GBP1P32455 592 aa18.14■□□□□ 0.49
ACTB-207ENST00000462494 SNX1Q13596 522 aa18.14■□□□□ 0.49
ACTB-207ENST00000462494 TNFAIP1Q13829 316 aa18.14■□□□□ 0.49
ACTB-207ENST00000462494 CLEC16AQ2KHT3 1053 aa18.14■□□□□ 0.49
ACTB-207ENST00000462494 SPIRE2Q8WWL2 714 aa18.14■□□□□ 0.49
ACTB-207ENST00000462494 BBXQ8WY36 941 aaPredicted RBP18.14■□□□□ 0.49
ACTB-207ENST00000462494 ATP6V0A1Q93050 837 aa18.14■□□□□ 0.49
ACTB-207ENST00000462494 FBXL18Q96ME1 805 aa18.14■□□□□ 0.49
ACTB-207ENST00000462494 NTPCRQ9BSD7 190 aaKnown RBP18.14■□□□□ 0.49
ACTB-207ENST00000462494 DDX20Q9UHI6 824 aaKnown RBP18.14■□□□□ 0.49
ACTB-207ENST00000462494 PASKQ96RG2 1323 aa18.14■□□□□ 0.49
ACTB-207ENST00000462494 RGS16O15492 202 aaPredicted RBP18.13■□□□□ 0.49
ACTB-207ENST00000462494 GRIN3BO60391 1043 aa18.13■□□□□ 0.49
ACTB-207ENST00000462494 SLCO1A2P46721 670 aa18.13■□□□□ 0.49
ACTB-207ENST00000462494 BYSLQ13895 437 aaKnown RBP18.13■□□□□ 0.49
ACTB-207ENST00000462494 SIX1Q15475 284 aaPredicted RBP18.13■□□□□ 0.49
ACTB-207ENST00000462494 CYP1B1Q16678 543 aa18.13■□□□□ 0.49
ACTB-207ENST00000462494 C2CD6Q53TS8 623 aa18.13■□□□□ 0.49
ACTB-207ENST00000462494 SNRNP48Q6IEG0 339 aaKnown RBP18.13■□□□□ 0.49
ACTB-207ENST00000462494 CPA5Q8WXQ8 436 aa18.13■□□□□ 0.49
ACTB-207ENST00000462494 TRIM7Q9C029 511 aa18.13■□□□□ 0.49
ACTB-207ENST00000462494 CNOT10Q9H9A5 744 aaKnown RBP18.13■□□□□ 0.49
ACTB-207ENST00000462494 ECEL1O95672 775 aa18.13■□□□□ 0.49
ACTB-207ENST00000462494 GTF2H1P32780 548 aa18.13■□□□□ 0.49
ACTB-207ENST00000462494 SGO2Q562F6 1265 aa18.13■□□□□ 0.49
ACTB-207ENST00000462494 RDM1Q8NG50 284 aa18.13■□□□□ 0.49
ACTB-207ENST00000462494 GPRASP2Q96D09 838 aa18.13■□□□□ 0.49
ACTB-207ENST00000462494 C1orf112Q9NSG2 853 aa18.13■□□□□ 0.49
ACTB-207ENST00000462494 SRCAPQ6ZRS2 3230 aa18.12■□□□□ 0.49
ACTB-207ENST00000462494 PSAPP07602 524 aa18.12■□□□□ 0.49
ACTB-207ENST00000462494 SCP2P22307 547 aa18.12■□□□□ 0.49
ACTB-207ENST00000462494 RXRBP28702 533 aa18.12■□□□□ 0.49
ACTB-207ENST00000462494 IFI35P80217 286 aaPredicted RBP18.12■□□□□ 0.49
ACTB-207ENST00000462494 CPLX4Q7Z7G2 160 aa18.12■□□□□ 0.49
ACTB-207ENST00000462494 EPS8L3Q8TE67 593 aaKnown RBP18.12■□□□□ 0.49
ACTB-207ENST00000462494 JDP2Q8WYK2 163 aa18.12■□□□□ 0.49
ACTB-207ENST00000462494 IFT74Q96LB3 600 aa18.12■□□□□ 0.49
ACTB-207ENST00000462494 PLVAPQ9BX97 442 aa18.12■□□□□ 0.49
ACTB-207ENST00000462494 POLR3FQ9H1D9 316 aaPredicted RBP18.12■□□□□ 0.49
ACTB-207ENST00000462494 C17orf75Q9HAS0 396 aa18.12■□□□□ 0.49
ACTB-207ENST00000462494 DGAT1O75907 488 aa18.11■□□□□ 0.49
ACTB-207ENST00000462494 PAEPP09466 180 aa18.11■□□□□ 0.49
ACTB-207ENST00000462494 KCNA2P16389 499 aa18.11■□□□□ 0.49
ACTB-207ENST00000462494 TNNI1P19237 187 aa18.11■□□□□ 0.49
ACTB-207ENST00000462494 MCCD1P59942 119 aaPredicted RBP18.11■□□□□ 0.49
ACTB-207ENST00000462494 PRKCEQ02156 737 aa18.11■□□□□ 0.49
ACTB-207ENST00000462494 CALCOCO2Q13137 446 aa18.11■□□□□ 0.49
ACTB-207ENST00000462494 LLGL2Q6P1M3 1020 aa18.11■□□□□ 0.49
ACTB-207ENST00000462494 YTHDF3Q7Z739 585 aaKnown RBP18.11■□□□□ 0.49
ACTB-207ENST00000462494 CCDC60Q8IWA6 550 aaPredicted RBP18.11■□□□□ 0.49
ACTB-207ENST00000462494 PSPC1Q8WXF1 523 aaKnown RBP18.11■□□□□ 0.49
ACTB-207ENST00000462494 ZNF516Q92618 1163 aa18.11■□□□□ 0.49
ACTB-207ENST00000462494 ART4Q93070 314 aa18.11■□□□□ 0.49
ACTB-207ENST00000462494 RUNDC3BQ96NL0 473 aa18.11■□□□□ 0.49
ACTB-207ENST00000462494 JPH1Q9HDC5 661 aaPredicted RBP18.11■□□□□ 0.49
ACTB-207ENST00000462494 XPNPEP1Q9NQW7 623 aa18.11■□□□□ 0.49
ACTB-207ENST00000462494 ZNFX1Q9P2E3 1918 aaKnown RBP18.11■□□□□ 0.49
ACTB-207ENST00000462494 FER1L6Q2WGJ9 1857 aa18.11■□□□□ 0.49
ACTB-207ENST00000462494 UTRNP46939 3433 aa18.11■□□□□ 0.49
ACTB-207ENST00000462494 STBD1O95210 358 aa18.11■□□□□ 0.49
ACTB-207ENST00000462494 CHN1P15882 459 aa18.11■□□□□ 0.49
ACTB-207ENST00000462494 FNTAP49354 379 aa18.11■□□□□ 0.49
ACTB-207ENST00000462494 LIG4P49917 911 aa18.11■□□□□ 0.49
ACTB-207ENST00000462494 GCNT1Q02742 428 aa18.11■□□□□ 0.49
ACTB-207ENST00000462494 SLMAPQ14BN4 828 aa18.11■□□□□ 0.49
ACTB-207ENST00000462494 MTERF2Q49AM1 385 aa18.11■□□□□ 0.49
ACTB-207ENST00000462494 BRDTQ58F21 947 aaPredicted RBP18.11■□□□□ 0.49
ACTB-207ENST00000462494 CYFIP1Q7L576 1253 aa18.11■□□□□ 0.49
ACTB-207ENST00000462494 TAS1R3Q7RTX0 852 aa18.11■□□□□ 0.49
ACTB-207ENST00000462494 MCPH1Q8NEM0 835 aa18.11■□□□□ 0.49
ACTB-207ENST00000462494 PGM2Q96G03 612 aa18.11■□□□□ 0.49
ACTB-207ENST00000462494 SEC16BQ96JE7 1060 aa18.11■□□□□ 0.49
ACTB-207ENST00000462494 CABS1Q96KC9 395 aa18.11■□□□□ 0.49
ACTB-207ENST00000462494 FNBP1Q96RU3 617 aa18.11■□□□□ 0.49
ACTB-207ENST00000462494 CEP89Q96ST8 783 aa18.11■□□□□ 0.49
ACTB-207ENST00000462494 SENP7Q9BQF6 1050 aa18.11■□□□□ 0.49
ACTB-207ENST00000462494 VPS33BQ9H267 617 aa18.11■□□□□ 0.49
ACTB-207ENST00000462494 ATP6V0A4Q9HBG4 840 aa18.11■□□□□ 0.49
ACTB-207ENST00000462494 CYP26B1Q9NR63 512 aa18.11■□□□□ 0.49
ACTB-207ENST00000462494 TNS1Q9HBL0 1735 aaKnown RBP18.11■□□□□ 0.49
ACTB-207ENST00000462494 RIPK2O43353 540 aa18.1■□□□□ 0.49
ACTB-207ENST00000462494 RGS20O76081 388 aa18.1■□□□□ 0.49
ACTB-207ENST00000462494 GARTP22102 1010 aa18.1■□□□□ 0.49
ACTB-207ENST00000462494 RRM1P23921 792 aa18.1■□□□□ 0.49
ACTB-207ENST00000462494 KRT17Q04695 432 aa18.1■□□□□ 0.49
ACTB-207ENST00000462494 WDR44Q5JSH3 913 aa18.1■□□□□ 0.49
ACTB-207ENST00000462494 C6orf118Q5T5N4 469 aa18.1■□□□□ 0.49
ACTB-207ENST00000462494 NBPF12Q5TAG4 269 aaPredicted RBP18.1■□□□□ 0.49
ACTB-207ENST00000462494 XRRA1Q6P2D8 792 aa18.1■□□□□ 0.49
ACTB-207ENST00000462494 CCDC121Q6ZUS5 278 aa18.1■□□□□ 0.49
ACTB-207ENST00000462494 ENOSF1Q7L5Y1 443 aa18.1■□□□□ 0.49
ACTB-207ENST00000462494 SAMD7Q7Z3H4 446 aa18.1■□□□□ 0.49
ACTB-207ENST00000462494 MCOLN2Q8IZK6 566 aa18.1■□□□□ 0.49
ACTB-207ENST00000462494 NSUN6Q8TEA1 469 aaKnown RBP18.1■□□□□ 0.49
ACTB-207ENST00000462494 ATG4AQ8WYN0 398 aa18.1■□□□□ 0.49
ACTB-207ENST00000462494 ZKSCAN4Q969J2 545 aaPredicted RBP18.1■□□□□ 0.49
ACTB-207ENST00000462494 XPO6Q96QU8 1125 aaKnown RBP18.1■□□□□ 0.49
ACTB-207ENST00000462494 CAMKK2Q96RR4 588 aa18.1■□□□□ 0.49
ACTB-207ENST00000462494 CCDC113Q9H0I3 377 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms