RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 DBF4BQ8NFT6 615 aa11.58□□□□□ -0.56
RTF1-202ENST00000462276 TRIM43Q96BQ3 446 aaPredicted RBP11.58□□□□□ -0.56
RTF1-202ENST00000462276 EIF2AQ9BY44 585 aaKnown RBP11.58□□□□□ -0.56
RTF1-202ENST00000462276 PPP1R12CQ9BZL4 782 aa11.58□□□□□ -0.56
RTF1-202ENST00000462276 C2CD2Q9Y426 696 aa11.58□□□□□ -0.56
RTF1-202ENST00000462276 DAAM1Q9Y4D1 1078 aa11.58□□□□□ -0.56
RTF1-202ENST00000462276 IPPQ9Y573 584 aa11.58□□□□□ -0.56
RTF1-202ENST00000462276 EVPLQ92817 2033 aa11.57□□□□□ -0.56
RTF1-202ENST00000462276 C9IYK1 514 aa11.57□□□□□ -0.56
RTF1-202ENST00000462276 HOXA2O43364 376 aa11.57□□□□□ -0.56
RTF1-202ENST00000462276 EVI5O60447 810 aa11.57□□□□□ -0.56
RTF1-202ENST00000462276 ACTN1P12814 892 aa11.57□□□□□ -0.56
RTF1-202ENST00000462276 ITGA4P13612 1032 aa11.57□□□□□ -0.56
RTF1-202ENST00000462276 KCNE1P15382 129 aa11.57□□□□□ -0.56
RTF1-202ENST00000462276 UBXN1Q04323 297 aa11.57□□□□□ -0.56
RTF1-202ENST00000462276 PPIGQ13427 754 aaKnown RBP eCLIP11.57□□□□□ -0.564e-6■□□□□ 8.2
RTF1-202ENST00000462276 SLC10A6Q3KNW5 377 aa11.57□□□□□ -0.56
RTF1-202ENST00000462276 HSP90AA4PQ58FG1 418 aa11.57□□□□□ -0.56
RTF1-202ENST00000462276 DCAF17Q5H9S7 520 aaPredicted RBP11.57□□□□□ -0.56
RTF1-202ENST00000462276 MIIPQ5JXC2 388 aa11.57□□□□□ -0.56
RTF1-202ENST00000462276 TCERG1LQ5VWI1 586 aa11.57□□□□□ -0.56
RTF1-202ENST00000462276 KRT39Q6A163 491 aa11.57□□□□□ -0.56
RTF1-202ENST00000462276 ALKAL1Q6UXT8 129 aa11.57□□□□□ -0.56
RTF1-202ENST00000462276 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.57□□□□□ -0.56
RTF1-202ENST00000462276 CDR2LQ86X02 465 aaPredicted RBP11.57□□□□□ -0.56
RTF1-202ENST00000462276 ECHDC2Q86YB7 292 aa11.57□□□□□ -0.56
RTF1-202ENST00000462276 CCDC127Q96BQ5 260 aa11.57□□□□□ -0.56
RTF1-202ENST00000462276 ERGIC2Q96RQ1 377 aa11.57□□□□□ -0.56
RTF1-202ENST00000462276 CGRRF1Q99675 332 aa11.57□□□□□ -0.56
RTF1-202ENST00000462276 VPS16Q9H269 839 aa11.57□□□□□ -0.56
RTF1-202ENST00000462276 TMEM8AQ9HCN3 771 aa11.57□□□□□ -0.56
RTF1-202ENST00000462276 PRDM5Q9NQX1 630 aaPredicted RBP11.57□□□□□ -0.56
RTF1-202ENST00000462276 SLC38A7Q9NVC3 462 aa11.57□□□□□ -0.56
RTF1-202ENST00000462276 TAB2Q9NYJ8 693 aa11.57□□□□□ -0.56
RTF1-202ENST00000462276 IFNKQ9P0W0 207 aa11.57□□□□□ -0.56
RTF1-202ENST00000462276 NR2E3Q9Y5X4 410 aa11.57□□□□□ -0.56
RTF1-202ENST00000462276 FRMPD3Q5JV73 1810 aa11.57□□□□□ -0.56
RTF1-202ENST00000462276 PES1O00541 588 aaKnown RBP11.56□□□□□ -0.56
RTF1-202ENST00000462276 ENPP3O14638 875 aa11.56□□□□□ -0.56
RTF1-202ENST00000462276 INPPL1O15357 1258 aa11.56□□□□□ -0.56
RTF1-202ENST00000462276 BAIAP3O94812 1187 aa11.56□□□□□ -0.56
RTF1-202ENST00000462276 TNNC2P02585 160 aa11.56□□□□□ -0.56
RTF1-202ENST00000462276 DLATP10515 647 aaKnown RBP11.56□□□□□ -0.56
RTF1-202ENST00000462276 TNNI1P19237 187 aa11.56□□□□□ -0.56
RTF1-202ENST00000462276 PAX3P23760 479 aa11.56□□□□□ -0.56
RTF1-202ENST00000462276 CDC25BP30305 580 aa11.56□□□□□ -0.56
RTF1-202ENST00000462276 ZNF75DP51815 510 aa11.56□□□□□ -0.56
RTF1-202ENST00000462276 ZBTB41Q5SVQ8 909 aa11.56□□□□□ -0.56
RTF1-202ENST00000462276 GBP6Q6ZN66 633 aa11.56□□□□□ -0.56
RTF1-202ENST00000462276 ZNF598Q86UK7 904 aaKnown RBP11.56□□□□□ -0.56
RTF1-202ENST00000462276 SMG8Q8ND04 991 aaKnown RBP11.56□□□□□ -0.56
RTF1-202ENST00000462276 SCLYQ96I15 445 aa11.56□□□□□ -0.56
RTF1-202ENST00000462276 FAXDC2Q96IV6 333 aa11.56□□□□□ -0.56
RTF1-202ENST00000462276 SNX27Q96L92 541 aa11.56□□□□□ -0.56
RTF1-202ENST00000462276 FAM81BQ96LP2 452 aa11.56□□□□□ -0.56
RTF1-202ENST00000462276 NAP1L5Q96NT1 182 aaPredicted RBP11.56□□□□□ -0.56
RTF1-202ENST00000462276 NUP58Q9BVL2 599 aa11.56□□□□□ -0.56
RTF1-202ENST00000462276 XPO4Q9C0E2 1151 aaKnown RBP11.56□□□□□ -0.56
RTF1-202ENST00000462276 NXF3Q9H4D5 531 aaKnown RBP11.56□□□□□ -0.56
RTF1-202ENST00000462276 PDE11AQ9HCR9 933 aa11.56□□□□□ -0.56
RTF1-202ENST00000462276 IL23AQ9NPF7 189 aa11.56□□□□□ -0.56
RTF1-202ENST00000462276 INTS13Q9NVM9 706 aa11.56□□□□□ -0.56
RTF1-202ENST00000462276 TMEM161AQ9NX61 479 aa11.56□□□□□ -0.56
RTF1-202ENST00000462276 SNTG2Q9NY99 539 aa11.56□□□□□ -0.56
RTF1-202ENST00000462276 CNTN3Q9P232 1028 aa11.56□□□□□ -0.56
RTF1-202ENST00000462276 KANSL3Q9P2N6 904 aa11.56□□□□□ -0.56
RTF1-202ENST00000462276 PARP2Q9UGN5 583 aa11.56□□□□□ -0.56
RTF1-202ENST00000462276 COQ4Q9Y3A0 265 aa11.56□□□□□ -0.56
RTF1-202ENST00000462276 UMODL1Q5DID0 1318 aa11.56□□□□□ -0.56
RTF1-202ENST00000462276 LRRIQ3A6PVS8 624 aaPredicted RBP11.55□□□□□ -0.56
RTF1-202ENST00000462276 LACTBL1A8MY62 500 aa11.55□□□□□ -0.56
RTF1-202ENST00000462276 MGEA5O60502 916 aa11.55□□□□□ -0.56
RTF1-202ENST00000462276 ZC3H11AO75152 810 aaKnown RBP eCLIP11.55□□□□□ -0.56
RTF1-202ENST00000462276 RECQL4O94761 1208 aa11.55□□□□□ -0.56
RTF1-202ENST00000462276 ADCY5O95622 1261 aa11.55□□□□□ -0.56
RTF1-202ENST00000462276 CXCL8P10145 99 aa11.55□□□□□ -0.56
RTF1-202ENST00000462276 CYP3A5P20815 502 aa11.55□□□□□ -0.56
RTF1-202ENST00000462276 TNFSF9P41273 254 aa11.55□□□□□ -0.56
RTF1-202ENST00000462276 FMO5P49326 533 aa11.55□□□□□ -0.56
RTF1-202ENST00000462276 MXI1P50539 228 aa11.55□□□□□ -0.56
RTF1-202ENST00000462276 OSTNP61366 133 aa11.55□□□□□ -0.56
RTF1-202ENST00000462276 TMEM132DQ14C87 1099 aa11.55□□□□□ -0.56
RTF1-202ENST00000462276 EXOC3L4Q17RC7 722 aa11.55□□□□□ -0.56
RTF1-202ENST00000462276 ZACNQ401N2 412 aa11.55□□□□□ -0.56
RTF1-202ENST00000462276 GLB1LQ6UWU2 654 aa11.55□□□□□ -0.56
RTF1-202ENST00000462276 SV2AQ7L0J3 742 aa11.55□□□□□ -0.56
RTF1-202ENST00000462276 RTN4RL1Q86UN2 441 aaPredicted RBP11.55□□□□□ -0.56
RTF1-202ENST00000462276 CEP120Q8N960 986 aa11.55□□□□□ -0.56
RTF1-202ENST00000462276 ZSWIM2Q8NEG5 633 aa11.55□□□□□ -0.56
RTF1-202ENST00000462276 ANKRD36BP1Q96IX9 119 aa11.55□□□□□ -0.56
RTF1-202ENST00000462276 OSBPL7Q9BZF2 842 aa11.55□□□□□ -0.56
RTF1-202ENST00000462276 EDEM3Q9BZQ6 932 aa11.55□□□□□ -0.56
RTF1-202ENST00000462276 UBQLN1Q9UMX0 589 aaKnown RBP11.55□□□□□ -0.56
RTF1-202ENST00000462276 R3HCC1Q9Y3T6 440 aaKnown RBP11.55□□□□□ -0.56
RTF1-202ENST00000462276 PCDHB7Q9Y5E2 793 aa11.55□□□□□ -0.56
RTF1-202ENST00000462276 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.55□□□□□ -0.568e-8■■■■□ 23.6
RTF1-202ENST00000462276 MYH11P35749 1972 aa11.55□□□□□ -0.56
RTF1-202ENST00000462276 ITIH6Q6UXX5 1313 aa11.55□□□□□ -0.56
RTF1-202ENST00000462276 TRIP12Q14669 1992 aaPredicted RBP11.54□□□□□ -0.56
RTF1-202ENST00000462276 CARNS1A5YM72 827 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms