RNA–Protein interactions for RNA: ENST00000461214.1

COL5A3-202, Transcript of collagen type V alpha 3 chain, humanhuman

TSL 3

Gene COL5A3, Length 828 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-202ENST00000461214 MAPK13O15264 365 aa15.69■□□□□ 0.1
COL5A3-202ENST00000461214 SLC16A3O15427 465 aaKnown RBP15.69■□□□□ 0.1
COL5A3-202ENST00000461214 ZNF623O75123 536 aa15.69■□□□□ 0.1
COL5A3-202ENST00000461214 NPTXRO95502 500 aa15.69■□□□□ 0.1
COL5A3-202ENST00000461214 FGFR1OPO95684 399 aaKnown RBP15.69■□□□□ 0.1
COL5A3-202ENST00000461214 CA3P07451 260 aa15.69■□□□□ 0.1
COL5A3-202ENST00000461214 ATP2A2P16615 1042 aaKnown RBP15.69■□□□□ 0.1
COL5A3-202ENST00000461214 GRM5P41594 1212 aa15.69■□□□□ 0.1
COL5A3-202ENST00000461214 PMS1P54277 932 aaKnown RBP15.69■□□□□ 0.1
COL5A3-202ENST00000461214 NHLH1Q02575 133 aa15.69■□□□□ 0.1
COL5A3-202ENST00000461214 LRRC55Q6ZSA7 311 aa15.69■□□□□ 0.1
COL5A3-202ENST00000461214 CSGALNACT2Q8N6G5 542 aa15.69■□□□□ 0.1
COL5A3-202ENST00000461214 XXYLT1Q8NBI6 393 aa15.69■□□□□ 0.1
COL5A3-202ENST00000461214 ENOX1Q8TC92 643 aaKnown RBP15.69■□□□□ 0.1
COL5A3-202ENST00000461214 LINC01599Q8WXQ3 324 aa15.69■□□□□ 0.1
COL5A3-202ENST00000461214 ARNTL2Q8WYA1 636 aa15.69■□□□□ 0.1
COL5A3-202ENST00000461214 FBXL18Q96ME1 805 aa15.69■□□□□ 0.1
COL5A3-202ENST00000461214 CCDC94Q9BW85 323 aaPredicted RBP15.69■□□□□ 0.1
COL5A3-202ENST00000461214 HAPLN2Q9GZV7 340 aa15.69■□□□□ 0.1
COL5A3-202ENST00000461214 ELAC1Q9H777 363 aaKnown RBP15.69■□□□□ 0.1
COL5A3-202ENST00000461214 USP20Q9Y2K6 914 aa15.69■□□□□ 0.1
COL5A3-202ENST00000461214 IKBKBO14920 756 aa15.68■□□□□ 0.1
COL5A3-202ENST00000461214 EXTL3O43909 919 aa15.68■□□□□ 0.1
COL5A3-202ENST00000461214 ZNF165P49910 485 aa15.68■□□□□ 0.1
COL5A3-202ENST00000461214 ZBTB33Q86T24 672 aa15.68■□□□□ 0.1
COL5A3-202ENST00000461214 CDR2LQ86X02 465 aaPredicted RBP15.68■□□□□ 0.1
COL5A3-202ENST00000461214 NOC3LQ8WTT2 800 aaKnown RBP15.68■□□□□ 0.1
COL5A3-202ENST00000461214 PGBD4Q96DM1 585 aa15.68■□□□□ 0.1
COL5A3-202ENST00000461214 ZBTB45Q96K62 511 aaPredicted RBP15.68■□□□□ 0.1
COL5A3-202ENST00000461214 DUSP9Q99956 384 aaKnown RBP15.68■□□□□ 0.1
COL5A3-202ENST00000461214 EIF2AQ9BY44 585 aaKnown RBP15.68■□□□□ 0.1
COL5A3-202ENST00000461214 FRMD4BQ9Y2L6 1034 aa15.68■□□□□ 0.1
COL5A3-202ENST00000461214 IPPQ9Y573 584 aa15.68■□□□□ 0.1
COL5A3-202ENST00000461214 PCDHB2Q9Y5E7 798 aa15.68■□□□□ 0.1
COL5A3-202ENST00000461214 CETN3O15182 167 aa15.67■□□□□ 0.1
COL5A3-202ENST00000461214 CLIC2O15247 247 aa15.67■□□□□ 0.1
COL5A3-202ENST00000461214 EXOC3O60645 756 aa15.67■□□□□ 0.1
COL5A3-202ENST00000461214 EOMESO95936 686 aa15.67■□□□□ 0.1
COL5A3-202ENST00000461214 HARSP12081 509 aaKnown RBP15.67■□□□□ 0.1
COL5A3-202ENST00000461214 CYP2J2P51589 502 aa15.67■□□□□ 0.1
COL5A3-202ENST00000461214 STX17P56962 302 aa15.67■□□□□ 0.1
COL5A3-202ENST00000461214 ENPEPQ07075 957 aa15.67■□□□□ 0.1
COL5A3-202ENST00000461214 TPD52L1Q16890 204 aaPredicted RBP15.67■□□□□ 0.1
COL5A3-202ENST00000461214 TCTN1Q2MV58 587 aa15.67■□□□□ 0.1
COL5A3-202ENST00000461214 SPATA1Q5VX52 437 aa15.67■□□□□ 0.1
COL5A3-202ENST00000461214 MRPL10Q7Z7H8 261 aaKnown RBP15.67■□□□□ 0.1
COL5A3-202ENST00000461214 ECHDC2Q86YB7 292 aa15.67■□□□□ 0.1
COL5A3-202ENST00000461214 FAM114A1Q8IWE2 563 aa15.67■□□□□ 0.1
COL5A3-202ENST00000461214 FAM200AQ8TCP9 573 aa15.67■□□□□ 0.1
COL5A3-202ENST00000461214 MED15Q96RN5 788 aa15.67■□□□□ 0.1
COL5A3-202ENST00000461214 NXF3Q9H4D5 531 aaKnown RBP15.67■□□□□ 0.1
COL5A3-202ENST00000461214 THAP9Q9H5L6 903 aa15.67■□□□□ 0.1
COL5A3-202ENST00000461214 UBN1Q9NPG3 1134 aa15.67■□□□□ 0.1
COL5A3-202ENST00000461214 TOPORSQ9NS56 1045 aaPredicted RBP15.67■□□□□ 0.1
COL5A3-202ENST00000461214 TMEM161AQ9NX61 479 aa15.67■□□□□ 0.1
COL5A3-202ENST00000461214 CPSF3Q9UKF6 684 aaKnown RBP15.67■□□□□ 0.1
COL5A3-202ENST00000461214 CHD7Q9P2D1 2997 aa15.67■□□□□ 0.1
COL5A3-202ENST00000461214 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.66■□□□□ 0.1
COL5A3-202ENST00000461214 SMTNL1A8MU46 457 aa15.66■□□□□ 0.1
COL5A3-202ENST00000461214 HOXA2O43364 376 aa15.66■□□□□ 0.1
COL5A3-202ENST00000461214 GNA14O95837 355 aa15.66■□□□□ 0.1
COL5A3-202ENST00000461214 CLTAP09496 248 aa15.66■□□□□ 0.1
COL5A3-202ENST00000461214 ATF7P17544 494 aaPredicted RBP15.66■□□□□ 0.1
COL5A3-202ENST00000461214 SSTR3P32745 418 aaPredicted RBP15.66■□□□□ 0.1
COL5A3-202ENST00000461214 YARSP54577 528 aaKnown RBP15.66■□□□□ 0.1
COL5A3-202ENST00000461214 WDR5P61964 334 aaKnown RBP15.66■□□□□ 0.1
COL5A3-202ENST00000461214 FAM189BP81408 668 aa15.66■□□□□ 0.1
COL5A3-202ENST00000461214 ADAM9Q13443 819 aa15.66■□□□□ 0.1
COL5A3-202ENST00000461214 SNRNP35Q16560 246 aaKnown RBP15.66■□□□□ 0.1
COL5A3-202ENST00000461214 USP37Q86T82 979 aa15.66■□□□□ 0.1
COL5A3-202ENST00000461214 ZNF598Q86UK7 904 aaKnown RBP15.66■□□□□ 0.1
COL5A3-202ENST00000461214 NPAS4Q8IUM7 802 aa15.66■□□□□ 0.1
COL5A3-202ENST00000461214 BRSK2Q8IWQ3 736 aa15.66■□□□□ 0.1
COL5A3-202ENST00000461214 AOPEPQ8N6M6 819 aa15.66■□□□□ 0.1
COL5A3-202ENST00000461214 CEP120Q8N960 986 aa15.66■□□□□ 0.1
COL5A3-202ENST00000461214 SMG8Q8ND04 991 aaKnown RBP15.66■□□□□ 0.1
COL5A3-202ENST00000461214 SAAL1Q96ER3 474 aa15.66■□□□□ 0.1
COL5A3-202ENST00000461214 TSPAN18Q96SJ8 248 aa15.66■□□□□ 0.1
COL5A3-202ENST00000461214 PCIF1Q9H4Z3 704 aa15.66■□□□□ 0.1
COL5A3-202ENST00000461214 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.66■□□□□ 0.1
COL5A3-202ENST00000461214 SCN1AP35498 2009 aa15.66■□□□□ 0.1
COL5A3-202ENST00000461214 PLXNA4Q9HCM2 1894 aa15.65■□□□□ 0.1
COL5A3-202ENST00000461214 ZNF233A6NK53 670 aa15.65■□□□□ 0.1
COL5A3-202ENST00000461214 ENPP3O14638 875 aa15.65■□□□□ 0.1
COL5A3-202ENST00000461214 INPPL1O15357 1258 aa15.65■□□□□ 0.1
COL5A3-202ENST00000461214 RECQL4O94761 1208 aa15.65■□□□□ 0.1
COL5A3-202ENST00000461214 IL18RAPO95256 599 aa15.65■□□□□ 0.1
COL5A3-202ENST00000461214 AMHP03971 560 aa15.65■□□□□ 0.1
COL5A3-202ENST00000461214 STAG3L1P0CL83 205 aa15.65■□□□□ 0.1
COL5A3-202ENST00000461214 EPB41P11171 864 aaKnown RBP15.65■□□□□ 0.1
COL5A3-202ENST00000461214 ITGA4P13612 1032 aa15.65■□□□□ 0.1
COL5A3-202ENST00000461214 PSMC2P35998 433 aaKnown RBP15.65■□□□□ 0.1
COL5A3-202ENST00000461214 KCNJ6P48051 423 aa15.65■□□□□ 0.1
COL5A3-202ENST00000461214 MARSP56192 900 aaKnown RBP15.65■□□□□ 0.1
COL5A3-202ENST00000461214 CEP135Q66GS9 1140 aa15.65■□□□□ 0.1
COL5A3-202ENST00000461214 CRELD2Q6UXH1 353 aaPredicted RBP15.65■□□□□ 0.1
COL5A3-202ENST00000461214 INTS8Q75QN2 995 aaKnown RBP15.65■□□□□ 0.1
COL5A3-202ENST00000461214 FILIP1Q7Z7B0 1213 aa15.65■□□□□ 0.1
COL5A3-202ENST00000461214 RTN4RL1Q86UN2 441 aaPredicted RBP15.65■□□□□ 0.1
COL5A3-202ENST00000461214 CD302Q8IX05 232 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms