RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 SLC39A4Q6P5W5 647 aa12.08□□□□□ -0.48
APTX-209ENST00000460940 LRRC55Q6ZSA7 311 aa12.08□□□□□ -0.48
APTX-209ENST00000460940 COLGALT1Q8NBJ5 622 aa12.08□□□□□ -0.48
APTX-209ENST00000460940 ZNF507Q8TCN5 953 aa12.08□□□□□ -0.48
APTX-209ENST00000460940 HPS3Q969F9 1004 aa12.08□□□□□ -0.48
APTX-209ENST00000460940 ZBTB45Q96K62 511 aaPredicted RBP12.08□□□□□ -0.48
APTX-209ENST00000460940 FAM161BQ96MY7 647 aa12.08□□□□□ -0.48
APTX-209ENST00000460940 ZNF558Q96NG5 402 aa12.08□□□□□ -0.48
APTX-209ENST00000460940 ACAP3Q96P50 834 aa12.08□□□□□ -0.48
APTX-209ENST00000460940 MSTO1Q9BUK6 570 aa12.08□□□□□ -0.48
APTX-209ENST00000460940 FGFBP2Q9BYJ0 223 aa12.08□□□□□ -0.48
APTX-209ENST00000460940 RMND1Q9NWS8 449 aa12.08□□□□□ -0.48
APTX-209ENST00000460940 MTUS1Q9ULD2 1270 aa12.08□□□□□ -0.48
APTX-209ENST00000460940 GDAQ9Y2T3 454 aa12.08□□□□□ -0.48
APTX-209ENST00000460940 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.08□□□□□ -0.48
APTX-209ENST00000460940 H3BNC9 293 aa12.08□□□□□ -0.48
APTX-209ENST00000460940 OGTO15294 1046 aa12.08□□□□□ -0.48
APTX-209ENST00000460940 RHOBTB3O94955 611 aa12.08□□□□□ -0.48
APTX-209ENST00000460940 TPM3P06753 285 aa12.08□□□□□ -0.48
APTX-209ENST00000460940 SNRPFP62306 86 aaKnown RBP12.08□□□□□ -0.48
APTX-209ENST00000460940 SPRED2Q7Z698 418 aa12.08□□□□□ -0.48
APTX-209ENST00000460940 TSC1Q92574 1164 aa12.08□□□□□ -0.48
APTX-209ENST00000460940 SNX27Q96L92 541 aa12.08□□□□□ -0.48
APTX-209ENST00000460940 ZFP42Q96MM3 310 aa12.08□□□□□ -0.48
APTX-209ENST00000460940 GUCD1Q96NT3 240 aa12.08□□□□□ -0.48
APTX-209ENST00000460940 FAM193BQ96PV7 902 aaPredicted RBP12.08□□□□□ -0.48
APTX-209ENST00000460940 GAS2L1Q99501 681 aaPredicted RBP12.08□□□□□ -0.48
APTX-209ENST00000460940 TMEM175Q9BSA9 504 aa12.08□□□□□ -0.48
APTX-209ENST00000460940 PRDM12Q9H4Q4 367 aa12.08□□□□□ -0.48
APTX-209ENST00000460940 CERS4Q9HA82 394 aa12.08□□□□□ -0.48
APTX-209ENST00000460940 NLRC5Q86WI3 1866 aa12.07□□□□□ -0.48
APTX-209ENST00000460940 CHD7Q9P2D1 2997 aa12.07□□□□□ -0.48
APTX-209ENST00000460940 COL4A4P53420 1690 aaPredicted RBP12.07□□□□□ -0.48
APTX-209ENST00000460940 EPOPA6NHQ4 379 aa12.07□□□□□ -0.48
APTX-209ENST00000460940 KIAA0391O15091 583 aaKnown RBP12.07□□□□□ -0.48
APTX-209ENST00000460940 FAM189A1O60320 539 aa12.07□□□□□ -0.48
APTX-209ENST00000460940 PRPF6O94906 941 aaKnown RBP12.07□□□□□ -0.48
APTX-209ENST00000460940 POMCP01189 267 aa12.07□□□□□ -0.48
APTX-209ENST00000460940 GARTP22102 1010 aa12.07□□□□□ -0.48
APTX-209ENST00000460940 SCNN1GP51170 649 aa12.07□□□□□ -0.48
APTX-209ENST00000460940 POU5F1Q01860 360 aaKnown RBP12.07□□□□□ -0.48
APTX-209ENST00000460940 KCNA1Q09470 495 aa12.07□□□□□ -0.48
APTX-209ENST00000460940 XKR4Q5GH76 650 aa12.07□□□□□ -0.48
APTX-209ENST00000460940 KCNT2Q6UVM3 1135 aa12.07□□□□□ -0.48
APTX-209ENST00000460940 THNSL1Q8IYQ7 743 aa12.07□□□□□ -0.48
APTX-209ENST00000460940 CEP120Q8N960 986 aa12.07□□□□□ -0.48
APTX-209ENST00000460940 GLIS3Q8NEA6 775 aa12.07□□□□□ -0.48
APTX-209ENST00000460940 SCFD1Q8WVM8 642 aa12.07□□□□□ -0.48
APTX-209ENST00000460940 POMGNT1Q8WZA1 660 aa12.07□□□□□ -0.48
APTX-209ENST00000460940 CDX2Q99626 313 aaPredicted RBP12.07□□□□□ -0.48
APTX-209ENST00000460940 GBP3Q9H0R5 595 aa12.07□□□□□ -0.48
APTX-209ENST00000460940 LMAN2LQ9H0V9 348 aa12.07□□□□□ -0.48
APTX-209ENST00000460940 PLEKHA5Q9HAU0 1116 aa12.07□□□□□ -0.48
APTX-209ENST00000460940 SLC39A2Q9NP94 309 aa12.07□□□□□ -0.48
APTX-209ENST00000460940 LMCD1Q9NZU5 365 aa12.07□□□□□ -0.48
APTX-209ENST00000460940 KIAA1671Q9BY89 1806 aa12.07□□□□□ -0.48
APTX-209ENST00000460940 SPDYE4A6NLX3 237 aa12.06□□□□□ -0.48
APTX-209ENST00000460940 ANKRD63C9JTQ0 380 aa12.06□□□□□ -0.48
APTX-209ENST00000460940 ZC3H11AO75152 810 aaKnown RBP eCLIP12.06□□□□□ -0.48
APTX-209ENST00000460940 POU3F3P20264 500 aaPredicted RBP12.06□□□□□ -0.48
APTX-209ENST00000460940 ALDH7A1P49419 539 aaKnown RBP12.06□□□□□ -0.48
APTX-209ENST00000460940 UBE3AQ05086 875 aa12.06□□□□□ -0.48
APTX-209ENST00000460940 DSC1Q08554 894 aa12.06□□□□□ -0.48
APTX-209ENST00000460940 GPM6BQ13491 265 aa12.06□□□□□ -0.48
APTX-209ENST00000460940 PNOCQ13519 176 aa12.06□□□□□ -0.48
APTX-209ENST00000460940 PTPROQ16827 1216 aa12.06□□□□□ -0.48
APTX-209ENST00000460940 HS2ST1Q7LGA3 356 aa12.06□□□□□ -0.48
APTX-209ENST00000460940 KIAA0895Q8NCT3 520 aa12.06□□□□□ -0.48
APTX-209ENST00000460940 GSTCDQ8NEC7 633 aa12.06□□□□□ -0.48
APTX-209ENST00000460940 SPATA20Q8TB22 786 aa12.06□□□□□ -0.48
APTX-209ENST00000460940 GOLGA5Q8TBA6 731 aa12.06□□□□□ -0.48
APTX-209ENST00000460940 GDPD5Q8WTR4 605 aa12.06□□□□□ -0.48
APTX-209ENST00000460940 GSDMAQ96QA5 445 aa12.06□□□□□ -0.48
APTX-209ENST00000460940 TSPAN18Q96SJ8 248 aa12.06□□□□□ -0.48
APTX-209ENST00000460940 HAPLN2Q9GZV7 340 aa12.06□□□□□ -0.48
APTX-209ENST00000460940 NRDE2Q9H7Z3 1164 aa12.06□□□□□ -0.48
APTX-209ENST00000460940 SLC38A7Q9NVC3 462 aa12.06□□□□□ -0.48
APTX-209ENST00000460940 KLK14Q9P0G3 267 aa12.06□□□□□ -0.48
APTX-209ENST00000460940 CNTN3Q9P232 1028 aa12.06□□□□□ -0.48
APTX-209ENST00000460940 HCSTQ9UBK5 93 aa12.06□□□□□ -0.48
APTX-209ENST00000460940 STK39Q9UEW8 545 aa12.06□□□□□ -0.48
APTX-209ENST00000460940 AGO2Q9UKV8 859 aaKnown RBP12.06□□□□□ -0.48
APTX-209ENST00000460940 LZTS1Q9Y250 596 aa12.06□□□□□ -0.48
APTX-209ENST00000460940 TRANK1O15050 2925 aa12.06□□□□□ -0.48
APTX-209ENST00000460940 PTGESO14684 152 aa12.06□□□□□ -0.48
APTX-209ENST00000460940 THP07101 528 aa12.06□□□□□ -0.48
APTX-209ENST00000460940 KCNE1P15382 129 aa12.06□□□□□ -0.48
APTX-209ENST00000460940 FOSL2P15408 326 aa12.06□□□□□ -0.48
APTX-209ENST00000460940 ADSSP30520 456 aa12.06□□□□□ -0.48
APTX-209ENST00000460940 HOXD13P35453 343 aa12.06□□□□□ -0.48
APTX-209ENST00000460940 AFF1P51825 1210 aaKnown RBP12.06□□□□□ -0.48
APTX-209ENST00000460940 BCAR1P56945 870 aa12.06□□□□□ -0.48
APTX-209ENST00000460940 OSTNP61366 133 aa12.06□□□□□ -0.48
APTX-209ENST00000460940 PLCB3Q01970 1234 aa12.06□□□□□ -0.48
APTX-209ENST00000460940 STK4Q13043 487 aa12.06□□□□□ -0.48
APTX-209ENST00000460940 ALKAL1Q6UXT8 129 aa12.06□□□□□ -0.48
APTX-209ENST00000460940 CD302Q8IX05 232 aa12.06□□□□□ -0.48
APTX-209ENST00000460940 COLGALT2Q8IYK4 626 aa12.06□□□□□ -0.48
APTX-209ENST00000460940 SLC39A11Q8N1S5 342 aa12.06□□□□□ -0.48
APTX-209ENST00000460940 KLHL23Q8NBE8 558 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms