RNA–Protein interactions for RNA: ENST00000460739.5

SOX2-OT-201, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 609 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-201ENST00000460739 RIN2Q8WYP3 895 aaPredicted RBP12.97□□□□□ -0.33
SOX2-OT-201ENST00000460739 ACSF2Q96CM8 615 aaPredicted RBP12.97□□□□□ -0.33
SOX2-OT-201ENST00000460739 AK8Q96MA6 479 aa12.97□□□□□ -0.33
SOX2-OT-201ENST00000460739 TTPALQ9BTX7 342 aa12.97□□□□□ -0.33
SOX2-OT-201ENST00000460739 MRPL4Q9BYD3 311 aaKnown RBP12.97□□□□□ -0.33
SOX2-OT-201ENST00000460739 CDT1Q9H211 546 aa12.97□□□□□ -0.33
SOX2-OT-201ENST00000460739 PLEKHA4Q9H4M7 779 aa12.97□□□□□ -0.33
SOX2-OT-201ENST00000460739 KCND2Q9NZV8 630 aa12.97□□□□□ -0.33
SOX2-OT-201ENST00000460739 KCNG1Q9UIX4 513 aa12.97□□□□□ -0.33
SOX2-OT-201ENST00000460739 CCDC195A0A1B0GUA6 201 aa12.96□□□□□ -0.33
SOX2-OT-201ENST00000460739 SFI1A8K8P3 1242 aa12.96□□□□□ -0.33
SOX2-OT-201ENST00000460739 TMEM189-UBE2V1I3L0A0 370 aa12.96□□□□□ -0.33
SOX2-OT-201ENST00000460739 TGM5O43548 720 aa12.96□□□□□ -0.33
SOX2-OT-201ENST00000460739 BRD1O95696 1058 aa12.96□□□□□ -0.33
SOX2-OT-201ENST00000460739 SPATA31D3P0C874 917 aa12.96□□□□□ -0.33
SOX2-OT-201ENST00000460739 SLC12A3P55017 1021 aa12.96□□□□□ -0.33
SOX2-OT-201ENST00000460739 ELAVL2Q12926 359 aaKnown RBP12.96□□□□□ -0.33
SOX2-OT-201ENST00000460739 MTMR3Q13615 1198 aa12.96□□□□□ -0.33
SOX2-OT-201ENST00000460739 CUL4AQ13619 759 aa12.96□□□□□ -0.33
SOX2-OT-201ENST00000460739 ZNF568Q3ZCX4 644 aa12.96□□□□□ -0.33
SOX2-OT-201ENST00000460739 TMEM119Q4V9L6 283 aa12.96□□□□□ -0.33
SOX2-OT-201ENST00000460739 XKR4Q5GH76 650 aa12.96□□□□□ -0.33
SOX2-OT-201ENST00000460739 FAM171A1Q5VUB5 890 aa12.96□□□□□ -0.33
SOX2-OT-201ENST00000460739 ALKAL1Q6UXT8 129 aa12.96□□□□□ -0.33
SOX2-OT-201ENST00000460739 SPATA31D4Q6ZUB0 917 aa12.96□□□□□ -0.33
SOX2-OT-201ENST00000460739 OTOP3Q7RTS5 596 aa12.96□□□□□ -0.33
SOX2-OT-201ENST00000460739 BRAPQ7Z569 592 aa12.96□□□□□ -0.33
SOX2-OT-201ENST00000460739 FBXL6Q8N531 539 aa12.96□□□□□ -0.33
SOX2-OT-201ENST00000460739 CEP120Q8N960 986 aa12.96□□□□□ -0.33
SOX2-OT-201ENST00000460739 HASPINQ8TF76 798 aa12.96□□□□□ -0.33
SOX2-OT-201ENST00000460739 PIK3R5Q8WYR1 880 aa12.96□□□□□ -0.33
SOX2-OT-201ENST00000460739 CDK5RAP3Q96JB5 506 aa12.96□□□□□ -0.33
SOX2-OT-201ENST00000460739 TARS2Q9BW92 718 aaKnown RBP12.96□□□□□ -0.33
SOX2-OT-201ENST00000460739 TOPORSQ9NS56 1045 aaPredicted RBP12.96□□□□□ -0.33
SOX2-OT-201ENST00000460739 LIMD1Q9UGP4 676 aa12.96□□□□□ -0.33
SOX2-OT-201ENST00000460739 SMIM28A0A1B0GU29 152 aa12.95□□□□□ -0.34
SOX2-OT-201ENST00000460739 ABLIM1O14639 778 aa12.95□□□□□ -0.34
SOX2-OT-201ENST00000460739 SLC16A4O15374 487 aa12.95□□□□□ -0.34
SOX2-OT-201ENST00000460739 RFPL2O75678 378 aa12.95□□□□□ -0.34
SOX2-OT-201ENST00000460739 BMP15O95972 392 aa12.95□□□□□ -0.34
SOX2-OT-201ENST00000460739 ASGR2P07307 311 aa12.95□□□□□ -0.34
SOX2-OT-201ENST00000460739 PLA2G4BP0C869 781 aa12.95□□□□□ -0.34
SOX2-OT-201ENST00000460739 MCF2P10911 925 aa12.95□□□□□ -0.34
SOX2-OT-201ENST00000460739 PLS3P13797 630 aa12.95□□□□□ -0.34
SOX2-OT-201ENST00000460739 RPL17P18621 184 aaKnown RBP12.95□□□□□ -0.34
SOX2-OT-201ENST00000460739 HOXD11P31277 338 aaPredicted RBP12.95□□□□□ -0.34
SOX2-OT-201ENST00000460739 SMTNP53814 917 aa12.95□□□□□ -0.34
SOX2-OT-201ENST00000460739 YARSP54577 528 aaKnown RBP12.95□□□□□ -0.34
SOX2-OT-201ENST00000460739 RAD51AP2Q09MP3 1159 aa12.95□□□□□ -0.34
SOX2-OT-201ENST00000460739 ARSHQ5FYA8 562 aa12.95□□□□□ -0.34
SOX2-OT-201ENST00000460739 GLRA4Q5JXX5 417 aa12.95□□□□□ -0.34
SOX2-OT-201ENST00000460739 PDXDC1Q6P996 788 aa12.95□□□□□ -0.34
SOX2-OT-201ENST00000460739 DCLRE1AQ6PJP8 1040 aa12.95□□□□□ -0.34
SOX2-OT-201ENST00000460739 PRSS55Q6UWB4 352 aaPredicted RBP12.95□□□□□ -0.34
SOX2-OT-201ENST00000460739 MPZL3Q6UWV2 235 aa12.95□□□□□ -0.34
SOX2-OT-201ENST00000460739 GLYCTKQ8IVS8 523 aa12.95□□□□□ -0.34
SOX2-OT-201ENST00000460739 SUGP1Q8IWZ8 645 aaKnown RBP12.95□□□□□ -0.34
SOX2-OT-201ENST00000460739 TMEM161BQ8NDZ6 487 aa12.95□□□□□ -0.34
SOX2-OT-201ENST00000460739 LNX1Q8TBB1 728 aaPredicted RBP12.95□□□□□ -0.34
SOX2-OT-201ENST00000460739 ZNF707Q96C28 371 aaPredicted RBP12.95□□□□□ -0.34
SOX2-OT-201ENST00000460739 UROC1Q96N76 676 aa12.95□□□□□ -0.34
SOX2-OT-201ENST00000460739 PLIN2Q99541 437 aa12.95□□□□□ -0.34
SOX2-OT-201ENST00000460739 CLSTN3Q9BQT9 956 aa12.95□□□□□ -0.34
SOX2-OT-201ENST00000460739 CCDC94Q9BW85 323 aaPredicted RBP12.95□□□□□ -0.34
SOX2-OT-201ENST00000460739 WDR6Q9NNW5 1121 aaKnown RBP12.95□□□□□ -0.34
SOX2-OT-201ENST00000460739 ZDHHC7Q9NXF8 308 aa12.95□□□□□ -0.34
SOX2-OT-201ENST00000460739 DOCK8Q8NF50 2099 aa12.94□□□□□ -0.34
SOX2-OT-201ENST00000460739 MYBP10242 640 aa12.94□□□□□ -0.34
SOX2-OT-201ENST00000460739 MAPTP10636 758 aaKnown RBP12.94□□□□□ -0.34
SOX2-OT-201ENST00000460739 FGFR3P22607 806 aa12.94□□□□□ -0.34
SOX2-OT-201ENST00000460739 UBA7P41226 1012 aa12.94□□□□□ -0.34
SOX2-OT-201ENST00000460739 CLCNKBP51801 687 aa12.94□□□□□ -0.34
SOX2-OT-201ENST00000460739 PSMD5Q16401 504 aa12.94□□□□□ -0.34
SOX2-OT-201ENST00000460739 UPP1Q16831 310 aa12.94□□□□□ -0.34
SOX2-OT-201ENST00000460739 CD300LGQ6UXG3 332 aa12.94□□□□□ -0.34
SOX2-OT-201ENST00000460739 ZPBP2Q6X784 338 aa12.94□□□□□ -0.34
SOX2-OT-201ENST00000460739 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.94□□□□□ -0.34
SOX2-OT-201ENST00000460739 CEP57Q86XR8 500 aa12.94□□□□□ -0.34
SOX2-OT-201ENST00000460739 SMG7Q92540 1137 aaKnown RBP12.94□□□□□ -0.34
SOX2-OT-201ENST00000460739 KCNN1Q92952 543 aa12.94□□□□□ -0.34
SOX2-OT-201ENST00000460739 SNX27Q96L92 541 aa12.94□□□□□ -0.34
SOX2-OT-201ENST00000460739 TCHPQ9BT92 498 aa12.94□□□□□ -0.34
SOX2-OT-201ENST00000460739 LARSQ9P2J5 1176 aaKnown RBP12.94□□□□□ -0.34
SOX2-OT-201ENST00000460739 ODF2LQ9ULJ1 636 aa12.94□□□□□ -0.34
SOX2-OT-201ENST00000460739 CLUHO75153 1309 aa12.93□□□□□ -0.34
SOX2-OT-201ENST00000460739 NPHP3-ACAD11A0A0J9YXS1 232 aa12.93□□□□□ -0.34
SOX2-OT-201ENST00000460739 TRAPPC3O43617 180 aa12.93□□□□□ -0.34
SOX2-OT-201ENST00000460739 N4BP1O75113 896 aaKnown RBP12.93□□□□□ -0.34
SOX2-OT-201ENST00000460739 TOM1L1O75674 476 aa12.93□□□□□ -0.34
SOX2-OT-201ENST00000460739 ZMYND10O75800 440 aa12.93□□□□□ -0.34
SOX2-OT-201ENST00000460739 B3GAT3O94766 335 aa12.93□□□□□ -0.34
SOX2-OT-201ENST00000460739 KCNE1P15382 129 aa12.93□□□□□ -0.34
SOX2-OT-201ENST00000460739 PDCP20941 246 aa12.93□□□□□ -0.34
SOX2-OT-201ENST00000460739 IGFBP6P24592 240 aaPredicted RBP12.93□□□□□ -0.34
SOX2-OT-201ENST00000460739 LONP1P36776 959 aaKnown RBP12.93□□□□□ -0.34
SOX2-OT-201ENST00000460739 NCKAP1LP55160 1127 aa12.93□□□□□ -0.34
SOX2-OT-201ENST00000460739 OSTNP61366 133 aa12.93□□□□□ -0.34
SOX2-OT-201ENST00000460739 NHLH1Q02575 133 aa12.93□□□□□ -0.34
SOX2-OT-201ENST00000460739 SOX4Q06945 474 aaPredicted RBP12.93□□□□□ -0.34
SOX2-OT-201ENST00000460739 STRN3Q13033 797 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms