RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 PPFIA2O75334 1257 aa19.43■□□□□ 0.7
HPS3-202ENST00000460120 KIAA0754O94854 1291 aa19.43■□□□□ 0.7
HPS3-202ENST00000460120 RRM1P23921 792 aa19.43■□□□□ 0.7
HPS3-202ENST00000460120 GPC3P51654 580 aa19.43■□□□□ 0.7
HPS3-202ENST00000460120 POLGP54098 1239 aaPredicted RBP19.43■□□□□ 0.7
HPS3-202ENST00000460120 SP2Q02086 613 aa19.43■□□□□ 0.7
HPS3-202ENST00000460120 DHX34Q14147 1143 aaKnown RBP19.43■□□□□ 0.7
HPS3-202ENST00000460120 QPCTQ16769 361 aa19.43■□□□□ 0.7
HPS3-202ENST00000460120 TTC31Q49AM3 519 aaPredicted RBP19.43■□□□□ 0.7
HPS3-202ENST00000460120 SEPT14Q6ZU15 432 aa19.43■□□□□ 0.7
HPS3-202ENST00000460120 EFCAB13Q8IY85 973 aa19.43■□□□□ 0.7
HPS3-202ENST00000460120 KIFAP3Q92845 792 aa19.43■□□□□ 0.7
HPS3-202ENST00000460120 IFT74Q96LB3 600 aa19.43■□□□□ 0.7
HPS3-202ENST00000460120 FNBP1Q96RU3 617 aa19.43■□□□□ 0.7
HPS3-202ENST00000460120 EPB41L4BQ9H329 900 aa19.43■□□□□ 0.7
HPS3-202ENST00000460120 CYP26B1Q9NR63 512 aa19.43■□□□□ 0.7
HPS3-202ENST00000460120 SLC9A2Q9UBY0 812 aa19.43■□□□□ 0.7
HPS3-202ENST00000460120 USTQ9Y2C2 406 aa19.43■□□□□ 0.7
HPS3-202ENST00000460120 PTPRJQ12913 1337 aa19.43■□□□□ 0.7
HPS3-202ENST00000460120 PSAPP07602 524 aa19.43■□□□□ 0.7
HPS3-202ENST00000460120 CHRNA3P32297 505 aa19.43■□□□□ 0.7
HPS3-202ENST00000460120 ARFGAP2Q8N6H7 521 aa19.43■□□□□ 0.7
HPS3-202ENST00000460120 ZNF280CQ8ND82 737 aa19.43■□□□□ 0.7
HPS3-202ENST00000460120 EPS8L3Q8TE67 593 aaKnown RBP19.43■□□□□ 0.7
HPS3-202ENST00000460120 NSUN6Q8TEA1 469 aaKnown RBP19.43■□□□□ 0.7
HPS3-202ENST00000460120 DDX1Q92499 740 aaKnown RBP19.43■□□□□ 0.7
HPS3-202ENST00000460120 WNT8AQ9H1J5 351 aa19.43■□□□□ 0.7
HPS3-202ENST00000460120 FAM187AA6NFU0 413 aa19.42■□□□□ 0.7
HPS3-202ENST00000460120 GZMAP12544 262 aa19.42■□□□□ 0.7
HPS3-202ENST00000460120 PIK3CAP42336 1068 aa19.42■□□□□ 0.7
HPS3-202ENST00000460120 RWDD2BP57060 319 aa19.42■□□□□ 0.7
HPS3-202ENST00000460120 IFI35P80217 286 aaPredicted RBP19.42■□□□□ 0.7
HPS3-202ENST00000460120 DALRD3Q5D0E6 543 aaKnown RBP19.42■□□□□ 0.7
HPS3-202ENST00000460120 ACAD10Q6JQN1 1059 aa19.42■□□□□ 0.7
HPS3-202ENST00000460120 CCDC50Q8IVM0 306 aa19.42■□□□□ 0.7
HPS3-202ENST00000460120 PPM1EQ8WY54 764 aa19.42■□□□□ 0.7
HPS3-202ENST00000460120 ATP6V0A4Q9HBG4 840 aa19.42■□□□□ 0.7
HPS3-202ENST00000460120 A1CFQ9NQ94 594 aaKnown RBP19.42■□□□□ 0.7
HPS3-202ENST00000460120 KLHL11Q9NVR0 708 aa19.42■□□□□ 0.7
HPS3-202ENST00000460120 GTF3C4Q9UKN8 822 aa19.42■□□□□ 0.7
HPS3-202ENST00000460120 CYP1A2P05177 515 aa19.42■□□□□ 0.7
HPS3-202ENST00000460120 PTPRAP18433 802 aa19.42■□□□□ 0.7
HPS3-202ENST00000460120 SCP2P22307 547 aa19.42■□□□□ 0.7
HPS3-202ENST00000460120 COILP38432 576 aaPredicted RBP19.42■□□□□ 0.7
HPS3-202ENST00000460120 CNTN2Q02246 1040 aa19.42■□□□□ 0.7
HPS3-202ENST00000460120 ANGEL2Q5VTE6 544 aaKnown RBP19.42■□□□□ 0.7
HPS3-202ENST00000460120 FBXW10Q5XX13 1052 aa19.42■□□□□ 0.7
HPS3-202ENST00000460120 EEPD1Q7L9B9 569 aa19.42■□□□□ 0.7
HPS3-202ENST00000460120 OTUD6BQ8N6M0 293 aa19.42■□□□□ 0.7
HPS3-202ENST00000460120 CD101Q93033 1021 aa19.42■□□□□ 0.7
HPS3-202ENST00000460120 MFSD14AQ96MC6 490 aa19.42■□□□□ 0.7
HPS3-202ENST00000460120 RPS6KC1Q96S38 1066 aa19.42■□□□□ 0.7
HPS3-202ENST00000460120 SLC12A6Q9UHW9 1150 aa19.42■□□□□ 0.7
HPS3-202ENST00000460120 MTUS1Q9ULD2 1270 aa19.42■□□□□ 0.7
HPS3-202ENST00000460120 NFKBIEO00221 500 aa19.41■□□□□ 0.7
HPS3-202ENST00000460120 STBD1O95210 358 aa19.41■□□□□ 0.7
HPS3-202ENST00000460120 CTNNA2P26232 953 aa19.41■□□□□ 0.7
HPS3-202ENST00000460120 RAPGEF5Q92565 580 aa19.41■□□□□ 0.7
HPS3-202ENST00000460120 CYFIP2Q96F07 1278 aa19.41■□□□□ 0.7
HPS3-202ENST00000460120 ZNF668Q96K58 619 aaPredicted RBP19.41■□□□□ 0.7
HPS3-202ENST00000460120 C11orf70Q9BRQ4 267 aa19.41■□□□□ 0.7
HPS3-202ENST00000460120 HERPUD2Q9BSE4 406 aa19.41■□□□□ 0.7
HPS3-202ENST00000460120 TIPINQ9BVW5 301 aa19.41■□□□□ 0.7
HPS3-202ENST00000460120 CHST7Q9NS84 486 aa19.41■□□□□ 0.7
HPS3-202ENST00000460120 FOXO6A8MYZ6 492 aa19.41■□□□□ 0.7
HPS3-202ENST00000460120 GRIN3BO60391 1043 aa19.41■□□□□ 0.7
HPS3-202ENST00000460120 HADHBP55084 474 aaKnown RBP19.41■□□□□ 0.7
HPS3-202ENST00000460120 CLEC16AQ2KHT3 1053 aa19.41■□□□□ 0.7
HPS3-202ENST00000460120 SGO2Q562F6 1265 aa19.41■□□□□ 0.7
HPS3-202ENST00000460120 PRUNE1Q86TP1 453 aa19.41■□□□□ 0.7
HPS3-202ENST00000460120 FAM212AQ96EL1 285 aa19.41■□□□□ 0.7
HPS3-202ENST00000460120 CCDC114Q96M63 670 aa19.41■□□□□ 0.7
HPS3-202ENST00000460120 PWWP2AQ96N64 755 aa19.41■□□□□ 0.7
HPS3-202ENST00000460120 ASIC3Q9UHC3 531 aa19.41■□□□□ 0.7
HPS3-202ENST00000460120 ZNF214Q9UL59 606 aaPredicted RBP19.41■□□□□ 0.7
HPS3-202ENST00000460120 PCDHA3Q9Y5H8 950 aa19.41■□□□□ 0.7
HPS3-202ENST00000460120 ACSL3O95573 720 aa19.4■□□□□ 0.7
HPS3-202ENST00000460120 HLA-DRAP01903 254 aa19.4■□□□□ 0.7
HPS3-202ENST00000460120 ZFYVE27Q5T4F4 411 aa19.4■□□□□ 0.7
HPS3-202ENST00000460120 TDRD10Q5VZ19 366 aaKnown RBP19.4■□□□□ 0.7
HPS3-202ENST00000460120 B4GALNT4Q76KP1 1039 aa19.4■□□□□ 0.7
HPS3-202ENST00000460120 SCYL3Q8IZE3 742 aa19.4■□□□□ 0.7
HPS3-202ENST00000460120 GPRASP2Q96D09 838 aa19.4■□□□□ 0.7
HPS3-202ENST00000460120 PABPC3Q9H361 631 aaKnown RBP19.4■□□□□ 0.7
HPS3-202ENST00000460120 CYP39A1Q9NYL5 469 aa19.4■□□□□ 0.7
HPS3-202ENST00000460120 CAPN7Q9Y6W3 813 aa19.4■□□□□ 0.7
HPS3-202ENST00000460120 UMODL1Q5DID0 1318 aa19.4■□□□□ 0.7
HPS3-202ENST00000460120 A0A087WUV0 522 aaPredicted RBP19.4■□□□□ 0.7
HPS3-202ENST00000460120 MAPK13O15264 365 aa19.4■□□□□ 0.7
HPS3-202ENST00000460120 DGAT1O75907 488 aa19.4■□□□□ 0.7
HPS3-202ENST00000460120 GHRHRQ02643 423 aa19.4■□□□□ 0.7
HPS3-202ENST00000460120 EMC2Q15006 297 aa19.4■□□□□ 0.7
HPS3-202ENST00000460120 POTEAQ6S8J7 498 aa19.4■□□□□ 0.7
HPS3-202ENST00000460120 TMEM270Q6UE05 265 aa19.4■□□□□ 0.7
HPS3-202ENST00000460120 ASAP3Q8TDY4 903 aa19.4■□□□□ 0.7
HPS3-202ENST00000460120 CEP89Q96ST8 783 aa19.4■□□□□ 0.7
HPS3-202ENST00000460120 DDX23Q9BUQ8 820 aaKnown RBP19.4■□□□□ 0.7
HPS3-202ENST00000460120 TARS2Q9BW92 718 aaKnown RBP19.4■□□□□ 0.7
HPS3-202ENST00000460120 TXLNGYQ9BZA5 131 aa19.4■□□□□ 0.7
HPS3-202ENST00000460120 GMNCA6NCL1 334 aa19.39■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms