RNA–Protein interactions for RNA: ENST00000459904.1

LMNA-209, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-209ENST00000459904 TUSC3Q13454 348 aa16.68■□□□□ 0.26
LMNA-209ENST00000459904 NAB2Q15742 525 aa16.68■□□□□ 0.26
LMNA-209ENST00000459904 DIS3L2Q8IYB7 885 aaKnown RBP16.68■□□□□ 0.26
LMNA-209ENST00000459904 FAM177A1Q8N128 213 aaPredicted RBP16.68■□□□□ 0.26
LMNA-209ENST00000459904 TMEM130Q8N3G9 435 aa16.68■□□□□ 0.26
LMNA-209ENST00000459904 RMDN1Q96DB5 314 aa16.68■□□□□ 0.26
LMNA-209ENST00000459904 MTMR9Q96QG7 549 aa16.68■□□□□ 0.26
LMNA-209ENST00000459904 NAP1L4Q99733 375 aaKnown RBP16.68■□□□□ 0.26
LMNA-209ENST00000459904 GOLGA2P5Q9HBQ8 144 aa16.68■□□□□ 0.26
LMNA-209ENST00000459904 ZDHHC7Q9NXF8 308 aa16.68■□□□□ 0.26
LMNA-209ENST00000459904 CACNA1AO00555 2505 aa16.68■□□□□ 0.26
LMNA-209ENST00000459904 SPTBN2O15020 2390 aa16.67■□□□□ 0.26
LMNA-209ENST00000459904 C8AP07357 584 aa16.67■□□□□ 0.26
LMNA-209ENST00000459904 POU5F1BQ06416 359 aa16.67■□□□□ 0.26
LMNA-209ENST00000459904 ST3GAL1Q11201 340 aa16.67■□□□□ 0.26
LMNA-209ENST00000459904 PPM1LQ5SGD2 360 aa16.67■□□□□ 0.26
LMNA-209ENST00000459904 ELMSAN1Q6PJG2 1045 aa16.67■□□□□ 0.26
LMNA-209ENST00000459904 CATSPER3Q86XQ3 398 aa16.67■□□□□ 0.26
LMNA-209ENST00000459904 HACE1Q8IYU2 909 aa16.67■□□□□ 0.26
LMNA-209ENST00000459904 MAML2Q8IZL2 1156 aaPredicted RBP16.67■□□□□ 0.26
LMNA-209ENST00000459904 NSUN7Q8NE18 718 aaKnown RBP16.67■□□□□ 0.26
LMNA-209ENST00000459904 SLC7A14Q8TBB6 771 aa16.67■□□□□ 0.26
LMNA-209ENST00000459904 TTPALQ9BTX7 342 aa16.67■□□□□ 0.26
LMNA-209ENST00000459904 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.67■□□□□ 0.264e-6■□□□□ 8.2
LMNA-209ENST00000459904 KIF26AQ9ULI4 1882 aaPredicted RBP16.67■□□□□ 0.26
LMNA-209ENST00000459904 SF3B1O75533 1304 aaKnown RBP eCLIP16.67■□□□□ 0.26
LMNA-209ENST00000459904 RALGAPA1Q6GYQ0 2036 aa16.67■□□□□ 0.26
LMNA-209ENST00000459904 MED19A0JLT2 244 aaPredicted RBP16.66■□□□□ 0.26
LMNA-209ENST00000459904 LMNAP02545 664 aaKnown RBP16.66■□□□□ 0.26
LMNA-209ENST00000459904 PRKCBP05771 671 aa16.66■□□□□ 0.26
LMNA-209ENST00000459904 ECM1Q16610 540 aa16.66■□□□□ 0.26
LMNA-209ENST00000459904 CYP26C1Q6V0L0 522 aa16.66■□□□□ 0.26
LMNA-209ENST00000459904 PJA1Q8NG27 643 aa16.66■□□□□ 0.26
LMNA-209ENST00000459904 HDAC7Q8WUI4 952 aa16.66■□□□□ 0.26
LMNA-209ENST00000459904 FGF13Q92913 245 aa16.66■□□□□ 0.26
LMNA-209ENST00000459904 HINFPQ9BQA5 517 aa16.66■□□□□ 0.26
LMNA-209ENST00000459904 NFKBIZQ9BYH8 718 aa16.66■□□□□ 0.26
LMNA-209ENST00000459904 RHOBTB2Q9BYZ6 727 aa16.66■□□□□ 0.26
LMNA-209ENST00000459904 PLA2G2FQ9BZM2 168 aa16.66■□□□□ 0.26
LMNA-209ENST00000459904 FZD8Q9H461 694 aa16.66■□□□□ 0.26
LMNA-209ENST00000459904 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.66■□□□□ 0.26
LMNA-209ENST00000459904 DPP7Q9UHL4 492 aa16.66■□□□□ 0.26
LMNA-209ENST00000459904 CDH7Q9ULB5 785 aa16.66■□□□□ 0.26
LMNA-209ENST00000459904 NRG2O14511 850 aaPredicted RBP16.65■□□□□ 0.26
LMNA-209ENST00000459904 PAPLNO95428 1278 aa16.65■□□□□ 0.26
LMNA-209ENST00000459904 THP07101 528 aa16.65■□□□□ 0.26
LMNA-209ENST00000459904 OR1D2P34982 312 aa16.65■□□□□ 0.26
LMNA-209ENST00000459904 BRCC3P46736 316 aa16.65■□□□□ 0.26
LMNA-209ENST00000459904 PRPF4BQ13523 1007 aaKnown RBP16.65■□□□□ 0.26
LMNA-209ENST00000459904 UBXN2BQ14CS0 331 aa16.65■□□□□ 0.26
LMNA-209ENST00000459904 ZNF174Q15697 407 aa16.65■□□□□ 0.26
LMNA-209ENST00000459904 AXDND1Q5T1B0 1012 aaPredicted RBP16.65■□□□□ 0.26
LMNA-209ENST00000459904 CD300LGQ6UXG3 332 aa16.65■□□□□ 0.26
LMNA-209ENST00000459904 PPP4R3CPQ6ZMV5 832 aa16.65■□□□□ 0.26
LMNA-209ENST00000459904 C1orf210Q8IVY1 113 aa16.65■□□□□ 0.26
LMNA-209ENST00000459904 CEP120Q8N960 986 aa16.65■□□□□ 0.26
LMNA-209ENST00000459904 C3orf58Q8NDZ4 430 aa16.65■□□□□ 0.26
LMNA-209ENST00000459904 PIK3R5Q8WYR1 880 aa16.65■□□□□ 0.26
LMNA-209ENST00000459904 DNMT3BQ9UBC3 853 aaKnown RBP16.65■□□□□ 0.26
LMNA-209ENST00000459904 ATG2BQ96BY7 2078 aa16.65■□□□□ 0.26
LMNA-209ENST00000459904 N4BP3O15049 544 aa16.64■□□□□ 0.25
LMNA-209ENST00000459904 TKTP29401 623 aaKnown RBP16.64■□□□□ 0.25
LMNA-209ENST00000459904 NBR1Q14596 966 aa16.64■□□□□ 0.25
LMNA-209ENST00000459904 PCBP1Q15365 356 aaKnown RBP eCLIP16.64■□□□□ 0.252e-6■□□□□ 9
LMNA-209ENST00000459904 NT5DC1Q5TFE4 455 aa16.64■□□□□ 0.25
LMNA-209ENST00000459904 LIN9Q5TKA1 542 aa16.64■□□□□ 0.25
LMNA-209ENST00000459904 CDCA2Q69YH5 1023 aaPredicted RBP16.64■□□□□ 0.25
LMNA-209ENST00000459904 PHLDB3Q6NSJ2 640 aa16.64■□□□□ 0.25
LMNA-209ENST00000459904 ZBTB8OSQ8IWT0 167 aa16.64■□□□□ 0.25
LMNA-209ENST00000459904 GTF3C6Q969F1 213 aa16.64■□□□□ 0.25
LMNA-209ENST00000459904 NXPE3Q969Y0 559 aa16.64■□□□□ 0.25
LMNA-209ENST00000459904 MCRS1Q96EZ8 462 aa16.64■□□□□ 0.25
LMNA-209ENST00000459904 CCDC113Q9H0I3 377 aa16.64■□□□□ 0.25
LMNA-209ENST00000459904 BRMS1Q9HCU9 246 aa16.64■□□□□ 0.25
LMNA-209ENST00000459904 SLC2A4RGQ9NR83 387 aa16.64■□□□□ 0.25
LMNA-209ENST00000459904 PRMT7Q9NVM4 692 aaPredicted RBP16.64■□□□□ 0.25
LMNA-209ENST00000459904 EPB41L2O43491 1005 aaKnown RBP16.63■□□□□ 0.25
LMNA-209ENST00000459904 CLCNKBP51801 687 aa16.63■□□□□ 0.25
LMNA-209ENST00000459904 OSTNP61366 133 aa16.63■□□□□ 0.25
LMNA-209ENST00000459904 SOX4Q06945 474 aaPredicted RBP16.63■□□□□ 0.25
LMNA-209ENST00000459904 SLC5A9Q2M3M2 681 aa16.63■□□□□ 0.25
LMNA-209ENST00000459904 SLC44A4Q53GD3 710 aa16.63■□□□□ 0.25
LMNA-209ENST00000459904 TSSK4Q6SA08 328 aa16.63■□□□□ 0.25
LMNA-209ENST00000459904 PADI6Q6TGC4 694 aa16.63■□□□□ 0.25
LMNA-209ENST00000459904 WASF1Q92558 559 aa16.63■□□□□ 0.25
LMNA-209ENST00000459904 CDY1Q9Y6F8 540 aa16.63■□□□□ 0.25
LMNA-209ENST00000459904 F5P12259 2224 aa16.63■□□□□ 0.25
LMNA-209ENST00000459904 STARD6P59095 220 aa16.62■□□□□ 0.25
LMNA-209ENST00000459904 MLF2Q15773 248 aaPredicted RBP16.62■□□□□ 0.25
LMNA-209ENST00000459904 FAM187BQ17R55 369 aa16.62■□□□□ 0.25
LMNA-209ENST00000459904 NPAS3Q8IXF0 933 aa16.62■□□□□ 0.25
LMNA-209ENST00000459904 DEPTORQ8TB45 409 aa16.62■□□□□ 0.25
LMNA-209ENST00000459904 SPATA6Q9NWH7 488 aaPredicted RBP16.62■□□□□ 0.25
LMNA-209ENST00000459904 COL4A2P08572 1712 aa16.62■□□□□ 0.25
LMNA-209ENST00000459904 NCOR2Q9Y618 2525 aa16.61■□□□□ 0.25
LMNA-209ENST00000459904 KANSL1LA0AUZ9 987 aa16.61■□□□□ 0.25
LMNA-209ENST00000459904 ARHGEF35A5YM69 484 aa16.61■□□□□ 0.25
LMNA-209ENST00000459904 FAM170BA6NMN3 283 aa16.61■□□□□ 0.25
LMNA-209ENST00000459904 B3GAT3O94766 335 aa16.61■□□□□ 0.25
LMNA-209ENST00000459904 CEBPBP17676 345 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms