RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 SGPL1O95470 568 aa9.46□□□□□ -0.9
HDAC3-202ENST00000459727 ADRB2P07550 413 aa9.46□□□□□ -0.9
HDAC3-202ENST00000459727 MYCLP12524 364 aaPredicted RBP9.46□□□□□ -0.9
HDAC3-202ENST00000459727 TAL1P17542 331 aaPredicted RBP9.46□□□□□ -0.9
HDAC3-202ENST00000459727 CHRNB2P17787 502 aa9.46□□□□□ -0.9
HDAC3-202ENST00000459727 EIF2AK2P19525 551 aaKnown RBP9.46□□□□□ -0.9
HDAC3-202ENST00000459727 POLD1P28340 1107 aa9.46□□□□□ -0.9
HDAC3-202ENST00000459727 RFC5P40937 340 aa9.46□□□□□ -0.9
HDAC3-202ENST00000459727 NAMPTP43490 491 aa9.46□□□□□ -0.9
HDAC3-202ENST00000459727 LIG4P49917 911 aa9.46□□□□□ -0.9
HDAC3-202ENST00000459727 PLTPP55058 493 aa9.46□□□□□ -0.9
HDAC3-202ENST00000459727 MAGOHP61326 146 aaKnown RBP9.46□□□□□ -0.9
HDAC3-202ENST00000459727 MAP2K1Q02750 393 aaPredicted RBP9.46□□□□□ -0.9
HDAC3-202ENST00000459727 TAP1Q03518 808 aa9.46□□□□□ -0.9
HDAC3-202ENST00000459727 NR1H3Q13133 447 aa9.46□□□□□ -0.9
HDAC3-202ENST00000459727 GRM1Q13255 1194 aa9.46□□□□□ -0.9
HDAC3-202ENST00000459727 ITIH4Q14624 930 aa9.46□□□□□ -0.9
HDAC3-202ENST00000459727 PPP1R7Q15435 360 aa9.46□□□□□ -0.9
HDAC3-202ENST00000459727 SURF1Q15526 300 aa9.46□□□□□ -0.9
HDAC3-202ENST00000459727 ERMARDQ5T6L9 678 aa9.46□□□□□ -0.9
HDAC3-202ENST00000459727 MIGA2Q7L4E1 593 aa9.46□□□□□ -0.9
HDAC3-202ENST00000459727 MAEAQ7L5Y9 396 aa9.46□□□□□ -0.9
HDAC3-202ENST00000459727 CPLX4Q7Z7G2 160 aa9.46□□□□□ -0.9
HDAC3-202ENST00000459727 DDX42Q86XP3 938 aaKnown RBP eCLIP9.46□□□□□ -0.9
HDAC3-202ENST00000459727 CPXCR1Q8N123 301 aa9.46□□□□□ -0.9
HDAC3-202ENST00000459727 CNPY4Q8N129 248 aa9.46□□□□□ -0.9
HDAC3-202ENST00000459727 CCDC89Q8N998 374 aa9.46□□□□□ -0.9
HDAC3-202ENST00000459727 IL31RAQ8NI17 732 aa9.46□□□□□ -0.9
HDAC3-202ENST00000459727 ART4Q93070 314 aa9.46□□□□□ -0.9
HDAC3-202ENST00000459727 SNF8Q96H20 258 aa9.46□□□□□ -0.9
HDAC3-202ENST00000459727 CABS1Q96KC9 395 aa9.46□□□□□ -0.9
HDAC3-202ENST00000459727 KREMEN1Q96MU8 473 aa9.46□□□□□ -0.9
HDAC3-202ENST00000459727 SERPINB12Q96P63 405 aa9.46□□□□□ -0.9
HDAC3-202ENST00000459727 XPO6Q96QU8 1125 aaKnown RBP9.46□□□□□ -0.9
HDAC3-202ENST00000459727 CCDC77Q9BR77 488 aa9.46□□□□□ -0.9
HDAC3-202ENST00000459727 TACO1Q9BSH4 297 aaKnown RBP9.46□□□□□ -0.9
HDAC3-202ENST00000459727 CELF4Q9BZC1 486 aaKnown RBP9.46□□□□□ -0.9
HDAC3-202ENST00000459727 IMPG2Q9BZV3 1241 aa9.46□□□□□ -0.9
HDAC3-202ENST00000459727 NEUROG2Q9H2A3 272 aa9.46□□□□□ -0.9
HDAC3-202ENST00000459727 RPAP3Q9H6T3 665 aaPredicted RBP9.46□□□□□ -0.9
HDAC3-202ENST00000459727 RAVER2Q9HCJ3 691 aaKnown RBP9.46□□□□□ -0.9
HDAC3-202ENST00000459727 JPH1Q9HDC5 661 aaPredicted RBP9.46□□□□□ -0.9
HDAC3-202ENST00000459727 PICK1Q9NRD5 415 aa9.46□□□□□ -0.9
HDAC3-202ENST00000459727 RNF146Q9NTX7 359 aa9.46□□□□□ -0.9
HDAC3-202ENST00000459727 GRHL1Q9NZI5 618 aa9.46□□□□□ -0.9
HDAC3-202ENST00000459727 TMOD4Q9NZQ9 345 aa9.46□□□□□ -0.9
HDAC3-202ENST00000459727 ARHGAP28Q9P2N2 729 aa9.46□□□□□ -0.9
HDAC3-202ENST00000459727 STYXL1Q9Y6J8 313 aa9.46□□□□□ -0.9
HDAC3-202ENST00000459727 TMEM110-MUSTN1A8MSY1 372 aa9.45□□□□□ -0.9
HDAC3-202ENST00000459727 VWA5AO00534 786 aa9.45□□□□□ -0.9
HDAC3-202ENST00000459727 RASGRF2O14827 1237 aa9.45□□□□□ -0.9
HDAC3-202ENST00000459727 GAS2O43903 313 aaKnown RBP9.45□□□□□ -0.9
HDAC3-202ENST00000459727 TCEA3O75764 348 aa9.45□□□□□ -0.9
HDAC3-202ENST00000459727 LSM8O95777 96 aaKnown RBP9.45□□□□□ -0.9
HDAC3-202ENST00000459727 NR3C2P08235 984 aa9.45□□□□□ -0.9
HDAC3-202ENST00000459727 GSTA1P08263 222 aa9.45□□□□□ -0.9
HDAC3-202ENST00000459727 MMEP08473 750 aa9.45□□□□□ -0.9
HDAC3-202ENST00000459727 KRT5P13647 590 aa9.45□□□□□ -0.9
HDAC3-202ENST00000459727 PIK3CAP42336 1068 aa9.45□□□□□ -0.9
HDAC3-202ENST00000459727 MMP13P45452 471 aa9.45□□□□□ -0.9
HDAC3-202ENST00000459727 YWHAEP62258 255 aaKnown RBP9.45□□□□□ -0.9
HDAC3-202ENST00000459727 C1QBPQ07021 282 aaKnown RBP9.45□□□□□ -0.9
HDAC3-202ENST00000459727 MKRN3Q13064 507 aaKnown RBP9.45□□□□□ -0.9
HDAC3-202ENST00000459727 ZNF211Q13398 564 aaPredicted RBP9.45□□□□□ -0.9
HDAC3-202ENST00000459727 PTK6Q13882 451 aa9.45□□□□□ -0.9
HDAC3-202ENST00000459727 SGO2Q562F6 1265 aa9.45□□□□□ -0.9
HDAC3-202ENST00000459727 SAMD1Q6SPF0 538 aaPredicted RBP9.45□□□□□ -0.9
HDAC3-202ENST00000459727 ZDHHC24Q6UX98 284 aa9.45□□□□□ -0.9
HDAC3-202ENST00000459727 SV2AQ7L0J3 742 aa9.45□□□□□ -0.9
HDAC3-202ENST00000459727 SLC47A2Q86VL8 602 aa9.45□□□□□ -0.9
HDAC3-202ENST00000459727 CBWD2Q8IUF1 395 aa9.45□□□□□ -0.9
HDAC3-202ENST00000459727 RELL1Q8IUW5 271 aa9.45□□□□□ -0.9
HDAC3-202ENST00000459727 CDAN1Q8IWY9 1227 aa9.45□□□□□ -0.9
HDAC3-202ENST00000459727 RHOT1Q8IXI2 618 aa9.45□□□□□ -0.9
HDAC3-202ENST00000459727 SCYL3Q8IZE3 742 aa9.45□□□□□ -0.9
HDAC3-202ENST00000459727 MCOLN2Q8IZK6 566 aa9.45□□□□□ -0.9
HDAC3-202ENST00000459727 GBP7Q8N8V2 638 aaPredicted RBP9.45□□□□□ -0.9
HDAC3-202ENST00000459727 CCDC197Q8NCU1 140 aa9.45□□□□□ -0.9
HDAC3-202ENST00000459727 DNERQ8NFT8 737 aa9.45□□□□□ -0.9
HDAC3-202ENST00000459727 FBXO25Q8TCJ0 367 aa9.45□□□□□ -0.9
HDAC3-202ENST00000459727 IPO4Q8TEX9 1081 aaKnown RBP9.45□□□□□ -0.9
HDAC3-202ENST00000459727 TATDN2Q93075 761 aa9.45□□□□□ -0.9
HDAC3-202ENST00000459727 CCDC127Q96BQ5 260 aa9.45□□□□□ -0.9
HDAC3-202ENST00000459727 C18orf8Q96DM3 657 aa9.45□□□□□ -0.9
HDAC3-202ENST00000459727 RBM41Q96IZ5 413 aaKnown RBP9.45□□□□□ -0.9
HDAC3-202ENST00000459727 TAAR1Q96RJ0 339 aa9.45□□□□□ -0.9
HDAC3-202ENST00000459727 PCDHB18PQ96TA0 734 aa9.45□□□□□ -0.9
HDAC3-202ENST00000459727 MPHOSPH6Q99547 160 aaKnown RBP9.45□□□□□ -0.9
HDAC3-202ENST00000459727 TRAIPQ9BWF2 469 aa9.45□□□□□ -0.9
HDAC3-202ENST00000459727 TEX13BQ9BXU2 312 aa9.45□□□□□ -0.9
HDAC3-202ENST00000459727 FRMD8P1Q9BZ68 369 aaPredicted RBP9.45□□□□□ -0.9
HDAC3-202ENST00000459727 TRIM31Q9BZY9 425 aa9.45□□□□□ -0.9
HDAC3-202ENST00000459727 KDM4CQ9H3R0 1056 aa9.45□□□□□ -0.9
HDAC3-202ENST00000459727 PPANQ9NQ55 473 aaKnown RBP9.45□□□□□ -0.9
HDAC3-202ENST00000459727 CYP26B1Q9NR63 512 aa9.45□□□□□ -0.9
HDAC3-202ENST00000459727 TMEM51Q9NW97 253 aa9.45□□□□□ -0.9
HDAC3-202ENST00000459727 PKD2L1Q9P0L9 805 aa9.45□□□□□ -0.9
HDAC3-202ENST00000459727 SAMD15Q9P1V8 674 aa9.45□□□□□ -0.9
HDAC3-202ENST00000459727 SLC9A2Q9UBY0 812 aa9.45□□□□□ -0.9
HDAC3-202ENST00000459727 ANAPC7Q9UJX3 599 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms