RNA–Protein interactions for RNA: ENST00000458721.5

VPS8-214, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 946 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-214ENST00000458721 NPR3P17342 541 aa6.34□□□□□ -1.39
VPS8-214ENST00000458721 RFX1P22670 979 aa6.34□□□□□ -1.39
VPS8-214ENST00000458721 KLRC2P26717 231 aa6.34□□□□□ -1.39
VPS8-214ENST00000458721 EXOSC10Q01780 885 aaKnown RBP6.34□□□□□ -1.39
VPS8-214ENST00000458721 CENPCQ03188 943 aa6.34□□□□□ -1.39
VPS8-214ENST00000458721 MCM6Q14566 821 aa6.34□□□□□ -1.39
VPS8-214ENST00000458721 ZNF528Q3MIS6 628 aa6.34□□□□□ -1.39
VPS8-214ENST00000458721 Q4G0T1 1027 aa6.34□□□□□ -1.39
VPS8-214ENST00000458721 JAKMIP3Q5VZ66 844 aa6.34□□□□□ -1.39
VPS8-214ENST00000458721 TMC5Q6UXY8 1006 aa6.34□□□□□ -1.39
VPS8-214ENST00000458721 TMEM173Q86WV6 379 aaPredicted RBP6.34□□□□□ -1.39
VPS8-214ENST00000458721 RNF168Q8IYW5 571 aaPredicted RBP6.34□□□□□ -1.39
VPS8-214ENST00000458721 SLC7A3Q8WY07 619 aa6.34□□□□□ -1.39
VPS8-214ENST00000458721 RUBCNQ92622 972 aa6.34□□□□□ -1.39
VPS8-214ENST00000458721 SHDQ96IW2 340 aa6.34□□□□□ -1.39
VPS8-214ENST00000458721 HERC2P3Q9BVR0 1158 aa6.34□□□□□ -1.39
VPS8-214ENST00000458721 TEKT3Q9BXF9 490 aa6.34□□□□□ -1.39
VPS8-214ENST00000458721 NRDE2Q9H7Z3 1164 aa6.34□□□□□ -1.39
VPS8-214ENST00000458721 RSAD1Q9HA92 442 aa6.34□□□□□ -1.39
VPS8-214ENST00000458721 SLC2A4RGQ9NR83 387 aa6.34□□□□□ -1.39
VPS8-214ENST00000458721 CDH22Q9UJ99 828 aa6.34□□□□□ -1.39
VPS8-214ENST00000458721 CACNA1BQ00975 2339 aa6.34□□□□□ -1.39
VPS8-214ENST00000458721 CYP3A7-CYP3A51PA0A087WV96 503 aa6.33□□□□□ -1.4
VPS8-214ENST00000458721 NT5C1B-RDH14C9J2C7 533 aa6.33□□□□□ -1.4
VPS8-214ENST00000458721 RNF225M0QZC1 329 aaPredicted RBP6.33□□□□□ -1.4
VPS8-214ENST00000458721 MSH4O15457 936 aa6.33□□□□□ -1.4
VPS8-214ENST00000458721 PRPF3O43395 683 aaKnown RBP6.33□□□□□ -1.4
VPS8-214ENST00000458721 OFD1O75665 1012 aa6.33□□□□□ -1.4
VPS8-214ENST00000458721 PSMD10O75832 226 aa6.33□□□□□ -1.4
VPS8-214ENST00000458721 EFEMP2O95967 443 aa6.33□□□□□ -1.4
VPS8-214ENST00000458721 POU2F2P09086 479 aa6.33□□□□□ -1.4
VPS8-214ENST00000458721 CNPP09543 421 aaKnown RBP6.33□□□□□ -1.4
VPS8-214ENST00000458721 CYP3A7P24462 503 aa6.33□□□□□ -1.4
VPS8-214ENST00000458721 AXLP30530 894 aa6.33□□□□□ -1.4
VPS8-214ENST00000458721 HOXA9P31269 272 aa6.33□□□□□ -1.4
VPS8-214ENST00000458721 SOX11P35716 441 aa6.33□□□□□ -1.4
VPS8-214ENST00000458721 SLC11A1P49279 550 aa6.33□□□□□ -1.4
VPS8-214ENST00000458721 GLUD2P49448 558 aa6.33□□□□□ -1.4
VPS8-214ENST00000458721 AKAP17AQ02040 695 aaKnown RBP6.33□□□□□ -1.4
VPS8-214ENST00000458721 GAS6Q14393 721 aa6.33□□□□□ -1.4
VPS8-214ENST00000458721 DBN1Q16643 649 aa6.33□□□□□ -1.4
VPS8-214ENST00000458721 BMP2KLQ5H9B9 411 aa6.33□□□□□ -1.4
VPS8-214ENST00000458721 GALNT17Q6IS24 598 aa6.33□□□□□ -1.4
VPS8-214ENST00000458721 B3GNT9Q6UX72 402 aa6.33□□□□□ -1.4
VPS8-214ENST00000458721 RSPO2Q6UXX9 243 aaPredicted RBP6.33□□□□□ -1.4
VPS8-214ENST00000458721 CATSPER4Q7RTX7 472 aa6.33□□□□□ -1.4
VPS8-214ENST00000458721 MIER3Q7Z3K6 550 aa6.33□□□□□ -1.4
VPS8-214ENST00000458721 SRGAP1Q7Z6B7 1085 aa6.33□□□□□ -1.4
VPS8-214ENST00000458721 MRPL10Q7Z7H8 261 aaKnown RBP6.33□□□□□ -1.4
VPS8-214ENST00000458721 RHPN2Q8IUC4 686 aa6.33□□□□□ -1.4
VPS8-214ENST00000458721 HACE1Q8IYU2 909 aa6.33□□□□□ -1.4
VPS8-214ENST00000458721 C12orf76Q8N812 135 aaPredicted RBP6.33□□□□□ -1.4
VPS8-214ENST00000458721 PSPC1Q8WXF1 523 aaKnown RBP6.33□□□□□ -1.4
VPS8-214ENST00000458721 CCDC136Q96JN2 1154 aa6.33□□□□□ -1.4
VPS8-214ENST00000458721 KLHL5Q96PQ7 755 aa6.33□□□□□ -1.4
VPS8-214ENST00000458721 FAM193BQ96PV7 902 aaPredicted RBP6.33□□□□□ -1.4
VPS8-214ENST00000458721 RPS6KC1Q96S38 1066 aa6.33□□□□□ -1.4
VPS8-214ENST00000458721 CEP89Q96ST8 783 aa6.33□□□□□ -1.4
VPS8-214ENST00000458721 VN1R3Q9BXE9 311 aa6.33□□□□□ -1.4
VPS8-214ENST00000458721 LRRC2Q9BYS8 371 aa6.33□□□□□ -1.4
VPS8-214ENST00000458721 OSBPL6Q9BZF3 934 aa6.33□□□□□ -1.4
VPS8-214ENST00000458721 SMOC2Q9H3U7 446 aa6.33□□□□□ -1.4
VPS8-214ENST00000458721 IFT122Q9HBG6 1241 aa6.33□□□□□ -1.4
VPS8-214ENST00000458721 MAN1C1Q9NR34 630 aa6.33□□□□□ -1.4
VPS8-214ENST00000458721 ARHGEF3Q9NR81 526 aa6.33□□□□□ -1.4
VPS8-214ENST00000458721 DLL3Q9NYJ7 618 aa6.33□□□□□ -1.4
VPS8-214ENST00000458721 FNIP2Q9P278 1114 aa6.33□□□□□ -1.4
VPS8-214ENST00000458721 FBXO4Q9UKT5 387 aa6.33□□□□□ -1.4
VPS8-214ENST00000458721 BRPF3Q9ULD4 1205 aa6.33□□□□□ -1.4
VPS8-214ENST00000458721 COL4A3BPQ9Y5P4 624 aa6.33□□□□□ -1.4
VPS8-214ENST00000458721 ACACBO00763 2458 aa6.33□□□□□ -1.4
VPS8-214ENST00000458721 A0A087WZ62 844 aa6.32□□□□□ -1.4
VPS8-214ENST00000458721 ANHXE9PGG2 379 aa6.32□□□□□ -1.4
VPS8-214ENST00000458721 ASAP2O43150 1006 aa6.32□□□□□ -1.4
VPS8-214ENST00000458721 ERLIN2O94905 339 aa6.32□□□□□ -1.4
VPS8-214ENST00000458721 F11P03951 625 aa6.32□□□□□ -1.4
VPS8-214ENST00000458721 ALDH2P05091 517 aa6.32□□□□□ -1.4
VPS8-214ENST00000458721 WEE2P0C1S8 567 aa6.32□□□□□ -1.4
VPS8-214ENST00000458721 GCFC2P16383 781 aaKnown RBP6.32□□□□□ -1.4
VPS8-214ENST00000458721 IFNAR1P17181 557 aa6.32□□□□□ -1.4
VPS8-214ENST00000458721 NCLP19338 710 aaKnown RBP6.32□□□□□ -1.4
VPS8-214ENST00000458721 CDC27P30260 824 aa6.32□□□□□ -1.4
VPS8-214ENST00000458721 GBP2P32456 591 aaPredicted RBP6.32□□□□□ -1.4
VPS8-214ENST00000458721 PSMC5P62195 406 aa6.32□□□□□ -1.4
VPS8-214ENST00000458721 FGD1P98174 961 aa6.32□□□□□ -1.4
VPS8-214ENST00000458721 DSG1Q02413 1049 aa6.32□□□□□ -1.4
VPS8-214ENST00000458721 POU5F1BQ06416 359 aa6.32□□□□□ -1.4
VPS8-214ENST00000458721 DSC1Q08554 894 aa6.32□□□□□ -1.4
VPS8-214ENST00000458721 KCNMA1Q12791 1236 aa6.32□□□□□ -1.4
VPS8-214ENST00000458721 PPP2R5CQ13362 524 aa6.32□□□□□ -1.4
VPS8-214ENST00000458721 COL9A3Q14050 684 aaPredicted RBP6.32□□□□□ -1.4
VPS8-214ENST00000458721 UGCGQ16739 394 aa6.32□□□□□ -1.4
VPS8-214ENST00000458721 MTERF2Q49AM1 385 aa6.32□□□□□ -1.4
VPS8-214ENST00000458721 OXLD1Q5BKU9 147 aa6.32□□□□□ -1.4
VPS8-214ENST00000458721 NOTUMQ6P988 496 aa6.32□□□□□ -1.4
VPS8-214ENST00000458721 AGMOQ6ZNB7 445 aa6.32□□□□□ -1.4
VPS8-214ENST00000458721 MTSS1LQ765P7 747 aa6.32□□□□□ -1.4
VPS8-214ENST00000458721 RTL10Q7L3V2 364 aa6.32□□□□□ -1.4
VPS8-214ENST00000458721 DGLUCYQ7Z3D6 616 aa6.32□□□□□ -1.4
VPS8-214ENST00000458721 RAB11FIP4Q86YS3 637 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms