RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 SH3BP5LQ7L8J4 393 aa12.65□□□□□ -0.38
SYNE2-207ENST00000458046 EEPD1Q7L9B9 569 aa12.65□□□□□ -0.38
SYNE2-207ENST00000458046 LRRC57Q8N9N7 239 aa12.65□□□□□ -0.38
SYNE2-207ENST00000458046 TPCN2Q8NHX9 752 aa12.65□□□□□ -0.38
SYNE2-207ENST00000458046 DCAF4Q8WV16 495 aa12.65□□□□□ -0.38
SYNE2-207ENST00000458046 SLC35C1Q96A29 364 aa12.65□□□□□ -0.38
SYNE2-207ENST00000458046 TAF1DQ9H5J8 278 aaPredicted RBP12.65□□□□□ -0.38
SYNE2-207ENST00000458046 SIX2Q9NPC8 291 aa12.65□□□□□ -0.38
SYNE2-207ENST00000458046 PLAAQ9Y263 795 aa12.65□□□□□ -0.38
SYNE2-207ENST00000458046 TMX2Q9Y320 296 aa12.65□□□□□ -0.38
SYNE2-207ENST00000458046 BZW2Q9Y6E2 419 aaKnown RBP12.65□□□□□ -0.38
SYNE2-207ENST00000458046 SART1O43290 800 aaKnown RBP12.65□□□□□ -0.38
SYNE2-207ENST00000458046 CHMP2AO43633 222 aa12.65□□□□□ -0.38
SYNE2-207ENST00000458046 FLOT1O75955 427 aa12.65□□□□□ -0.38
SYNE2-207ENST00000458046 Q4G0T1 1027 aa12.65□□□□□ -0.38
SYNE2-207ENST00000458046 PEX26Q7Z412 305 aa12.65□□□□□ -0.38
SYNE2-207ENST00000458046 TPH2Q8IWU9 490 aa12.65□□□□□ -0.38
SYNE2-207ENST00000458046 WHAMMQ8TF30 809 aa12.65□□□□□ -0.38
SYNE2-207ENST00000458046 SCFD2Q8WU76 684 aa12.65□□□□□ -0.38
SYNE2-207ENST00000458046 SPIRE2Q8WWL2 714 aa12.65□□□□□ -0.38
SYNE2-207ENST00000458046 NYAP2Q9P242 653 aa12.65□□□□□ -0.38
SYNE2-207ENST00000458046 GTF2IRD1Q9UHL9 959 aa12.65□□□□□ -0.38
SYNE2-207ENST00000458046 KRIT1O00522 736 aa12.65□□□□□ -0.39
SYNE2-207ENST00000458046 DDX3XO00571 662 aaKnown RBP eCLIP12.65□□□□□ -0.39
SYNE2-207ENST00000458046 NDUFB10O96000 172 aa12.65□□□□□ -0.39
SYNE2-207ENST00000458046 H2AFZP0C0S5 128 aa12.65□□□□□ -0.39
SYNE2-207ENST00000458046 MTHFD1P11586 935 aaKnown RBP12.65□□□□□ -0.39
SYNE2-207ENST00000458046 RPL13P26373 211 aaKnown RBP12.65□□□□□ -0.39
SYNE2-207ENST00000458046 COG2Q14746 738 aa12.65□□□□□ -0.39
SYNE2-207ENST00000458046 MLC1Q15049 377 aa12.65□□□□□ -0.39
SYNE2-207ENST00000458046 H2AFVQ71UI9 128 aa12.65□□□□□ -0.39
SYNE2-207ENST00000458046 DAAM2Q86T65 1068 aa12.65□□□□□ -0.39
SYNE2-207ENST00000458046 EFCAB13Q8IY85 973 aa12.65□□□□□ -0.39
SYNE2-207ENST00000458046 MYCT1Q8N699 235 aa12.65□□□□□ -0.39
SYNE2-207ENST00000458046 LILRB1Q8NHL6 650 aaPredicted RBP12.65□□□□□ -0.39
SYNE2-207ENST00000458046 PBKQ96KB5 322 aa12.65□□□□□ -0.39
SYNE2-207ENST00000458046 PI4KBQ9UBF8 816 aa12.65□□□□□ -0.39
SYNE2-207ENST00000458046 FAM198AQ9UFP1 575 aa12.65□□□□□ -0.39
SYNE2-207ENST00000458046 AMACRQ9UHK6 382 aa12.65□□□□□ -0.39
SYNE2-207ENST00000458046 BTNL10A8MVZ5 291 aa12.64□□□□□ -0.39
SYNE2-207ENST00000458046 TGFB1I1O43294 461 aa12.64□□□□□ -0.39
SYNE2-207ENST00000458046 KLF4O43474 513 aa12.64□□□□□ -0.39
SYNE2-207ENST00000458046 JAG1P78504 1218 aa12.64□□□□□ -0.39
SYNE2-207ENST00000458046 BIRC3Q13489 604 aa12.64□□□□□ -0.39
SYNE2-207ENST00000458046 IFI16Q16666 785 aaKnown RBP12.64□□□□□ -0.39
SYNE2-207ENST00000458046 MOXD1Q6UVY6 613 aa12.64□□□□□ -0.39
SYNE2-207ENST00000458046 MREGQ8N565 214 aa12.64□□□□□ -0.39
SYNE2-207ENST00000458046 FAM20AQ96MK3 541 aa12.64□□□□□ -0.39
SYNE2-207ENST00000458046 ISCUQ9H1K1 167 aa12.64□□□□□ -0.39
SYNE2-207ENST00000458046 NEUROG2Q9H2A3 272 aa12.64□□□□□ -0.39
SYNE2-207ENST00000458046 CYLDQ9NQC7 956 aa12.64□□□□□ -0.39
SYNE2-207ENST00000458046 VAV3Q9UKW4 847 aa12.64□□□□□ -0.39
SYNE2-207ENST00000458046 NOC2LQ9Y3T9 749 aaKnown RBP12.64□□□□□ -0.39
SYNE2-207ENST00000458046 A0A087WUV0 522 aaPredicted RBP12.64□□□□□ -0.39
SYNE2-207ENST00000458046 IL33O95760 270 aa12.64□□□□□ -0.39
SYNE2-207ENST00000458046 OATP04181 439 aa12.64□□□□□ -0.39
SYNE2-207ENST00000458046 NR1D1P20393 614 aa12.64□□□□□ -0.39
SYNE2-207ENST00000458046 ECHS1P30084 290 aa12.64□□□□□ -0.39
SYNE2-207ENST00000458046 SREBF1P36956 1147 aa12.64□□□□□ -0.39
SYNE2-207ENST00000458046 PRKCIP41743 596 aa12.64□□□□□ -0.39
SYNE2-207ENST00000458046 SEC24CP53992 1094 aa12.64□□□□□ -0.39
SYNE2-207ENST00000458046 RINT1Q6NUQ1 792 aa12.64□□□□□ -0.39
SYNE2-207ENST00000458046 MZT2AQ6P582 158 aa12.64□□□□□ -0.39
SYNE2-207ENST00000458046 TADA2BQ86TJ2 420 aa12.64□□□□□ -0.39
SYNE2-207ENST00000458046 C1orf216Q8TAB5 229 aa12.64□□□□□ -0.39
SYNE2-207ENST00000458046 ACTRT1Q8TDG2 376 aa12.64□□□□□ -0.39
SYNE2-207ENST00000458046 ATP6V1G3Q96LB4 118 aa12.64□□□□□ -0.39
SYNE2-207ENST00000458046 CDH19Q9H159 772 aa12.64□□□□□ -0.39
SYNE2-207ENST00000458046 OSGEPQ9NPF4 335 aa12.64□□□□□ -0.39
SYNE2-207ENST00000458046 PGRMC1O00264 195 aaKnown RBP12.63□□□□□ -0.39
SYNE2-207ENST00000458046 OPLAHO14841 1288 aa12.63□□□□□ -0.39
SYNE2-207ENST00000458046 CCDC159P0C7I6 412 aa12.63□□□□□ -0.39
SYNE2-207ENST00000458046 ABCB4P21439 1286 aa12.63□□□□□ -0.39
SYNE2-207ENST00000458046 LSP1P33241 339 aa12.63□□□□□ -0.39
SYNE2-207ENST00000458046 HSD17B3P37058 310 aa12.63□□□□□ -0.39
SYNE2-207ENST00000458046 RXRGP48443 463 aa12.63□□□□□ -0.39
SYNE2-207ENST00000458046 GALCP54803 685 aa12.63□□□□□ -0.39
SYNE2-207ENST00000458046 JAM2P57087 298 aa12.63□□□□□ -0.39
SYNE2-207ENST00000458046 SYDE2Q5VT97 1194 aa12.63□□□□□ -0.39
SYNE2-207ENST00000458046 NAA35Q5VZE5 725 aa12.63□□□□□ -0.39
SYNE2-207ENST00000458046 KDM7AQ6ZMT4 941 aa12.63□□□□□ -0.39
SYNE2-207ENST00000458046 VPS36Q86VN1 386 aa12.63□□□□□ -0.39
SYNE2-207ENST00000458046 CELF4Q9BZC1 486 aaKnown RBP12.63□□□□□ -0.39
SYNE2-207ENST00000458046 CDHR5Q9HBB8 845 aa12.63□□□□□ -0.39
SYNE2-207ENST00000458046 TAF1LQ8IZX4 1826 aa12.63□□□□□ -0.39
SYNE2-207ENST00000458046 ARFGEF1Q9Y6D6 1849 aa12.63□□□□□ -0.39
SYNE2-207ENST00000458046 DAPK3O43293 454 aa12.63□□□□□ -0.39
SYNE2-207ENST00000458046 EVI5O60447 810 aa12.63□□□□□ -0.39
SYNE2-207ENST00000458046 FAM13AO94988 1023 aa12.63□□□□□ -0.39
SYNE2-207ENST00000458046 EYA4O95677 639 aa12.63□□□□□ -0.39
SYNE2-207ENST00000458046 SLC4A1P02730 911 aa12.63□□□□□ -0.39
SYNE2-207ENST00000458046 HSPA9P38646 679 aaKnown RBP12.63□□□□□ -0.39
SYNE2-207ENST00000458046 HTR3AP46098 478 aa12.63□□□□□ -0.39
SYNE2-207ENST00000458046 TMED1Q13445 227 aa12.63□□□□□ -0.39
SYNE2-207ENST00000458046 ABCB5Q2M3G0 1257 aa12.63□□□□□ -0.39
SYNE2-207ENST00000458046 ADAT2Q7Z6V5 191 aaKnown RBP12.63□□□□□ -0.39
SYNE2-207ENST00000458046 FAM186BQ8IYM0 893 aa12.63□□□□□ -0.39
SYNE2-207ENST00000458046 DYDC2Q96IM9 177 aa12.63□□□□□ -0.39
SYNE2-207ENST00000458046 FAM107BQ9H098 131 aa12.63□□□□□ -0.39
SYNE2-207ENST00000458046 KIF13BQ9NQT8 1826 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms