RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 ANKRD40Q6AI12 368 aa15.32■□□□□ 0.04
TIMP1-205ENST00000456754 ALKAL1Q6UXT8 129 aa15.32■□□□□ 0.04
TIMP1-205ENST00000456754 TMEM173Q86WV6 379 aaPredicted RBP15.32■□□□□ 0.04
TIMP1-205ENST00000456754 FIBCD1Q8N539 461 aa15.32■□□□□ 0.04
TIMP1-205ENST00000456754 PLEKHO2Q8TD55 490 aa15.32■□□□□ 0.04
TIMP1-205ENST00000456754 C18orf25Q96B23 403 aaPredicted RBP15.32■□□□□ 0.04
TIMP1-205ENST00000456754 FAM161BQ96MY7 647 aa15.32■□□□□ 0.04
TIMP1-205ENST00000456754 PAAF1Q9BRP4 392 aa15.32■□□□□ 0.04
TIMP1-205ENST00000456754 NRDE2Q9H7Z3 1164 aa15.32■□□□□ 0.04
TIMP1-205ENST00000456754 GIT1Q9Y2X7 761 aa15.32■□□□□ 0.04
TIMP1-205ENST00000456754 COL4A4P53420 1690 aaPredicted RBP15.32■□□□□ 0.04
TIMP1-205ENST00000456754 PLXNA4Q9HCM2 1894 aa15.31■□□□□ 0.04
TIMP1-205ENST00000456754 SMIM28A0A1B0GU29 152 aa15.31■□□□□ 0.04
TIMP1-205ENST00000456754 TTC26A0AVF1 554 aa15.31■□□□□ 0.04
TIMP1-205ENST00000456754 PDXKO00764 312 aa15.31■□□□□ 0.04
TIMP1-205ENST00000456754 INPPL1O15357 1258 aa15.31■□□□□ 0.04
TIMP1-205ENST00000456754 HOXA2O43364 376 aa15.31■□□□□ 0.04
TIMP1-205ENST00000456754 EXTL3O43909 919 aa15.31■□□□□ 0.04
TIMP1-205ENST00000456754 NR3C1P04150 777 aa15.31■□□□□ 0.04
TIMP1-205ENST00000456754 NFICP08651 508 aa15.31■□□□□ 0.04
TIMP1-205ENST00000456754 CLTAP09496 248 aa15.31■□□□□ 0.04
TIMP1-205ENST00000456754 KLHL40Q2TBA0 621 aa15.31■□□□□ 0.04
TIMP1-205ENST00000456754 XKR4Q5GH76 650 aa15.31■□□□□ 0.04
TIMP1-205ENST00000456754 PPP2R2DQ66LE6 453 aa15.31■□□□□ 0.04
TIMP1-205ENST00000456754 LMBRD2Q68DH5 695 aaPredicted RBP15.31■□□□□ 0.04
TIMP1-205ENST00000456754 FAM43BQ6ZT52 329 aaPredicted RBP15.31■□□□□ 0.04
TIMP1-205ENST00000456754 Q7L0L9 218 aa15.31■□□□□ 0.04
TIMP1-205ENST00000456754 HS2ST1Q7LGA3 356 aa15.31■□□□□ 0.04
TIMP1-205ENST00000456754 HACE1Q8IYU2 909 aa15.31■□□□□ 0.04
TIMP1-205ENST00000456754 LRRC43Q8N309 656 aa15.31■□□□□ 0.04
TIMP1-205ENST00000456754 GPD1LQ8N335 351 aa15.31■□□□□ 0.04
TIMP1-205ENST00000456754 BCL7CQ8WUZ0 217 aaPredicted RBP15.31■□□□□ 0.04
TIMP1-205ENST00000456754 NELFBQ8WX92 580 aa15.31■□□□□ 0.04
TIMP1-205ENST00000456754 RPF1Q9H9Y2 349 aaKnown RBP15.31■□□□□ 0.04
TIMP1-205ENST00000456754 DMAC2Q9NW81 257 aa15.31■□□□□ 0.04
TIMP1-205ENST00000456754 TRAF3IP3Q9Y228 551 aa15.31■□□□□ 0.04
TIMP1-205ENST00000456754 PTPRJQ12913 1337 aa15.31■□□□□ 0.04
TIMP1-205ENST00000456754 CDH23Q9H251 3354 aa15.31■□□□□ 0.04
TIMP1-205ENST00000456754 SZT2Q5T011 3432 aa15.31■□□□□ 0.04
TIMP1-205ENST00000456754 ATG2AQ2TAZ0 1938 aa15.31■□□□□ 0.04
TIMP1-205ENST00000456754 CASTOR2A6NHX0 329 aa15.3■□□□□ 0.04
TIMP1-205ENST00000456754 ZC3H11AO75152 810 aaKnown RBP eCLIP15.3■□□□□ 0.04
TIMP1-205ENST00000456754 CSPG5O95196 566 aa15.3■□□□□ 0.04
TIMP1-205ENST00000456754 SLC11A1P49279 550 aa15.3■□□□□ 0.04
TIMP1-205ENST00000456754 FXR1P51114 621 aaKnown RBP eCLIP15.3■□□□□ 0.04
TIMP1-205ENST00000456754 YARSP54577 528 aaKnown RBP15.3■□□□□ 0.04
TIMP1-205ENST00000456754 NLRP12P59046 1061 aa15.3■□□□□ 0.04
TIMP1-205ENST00000456754 COBLL1Q53SF7 1204 aa15.3■□□□□ 0.04
TIMP1-205ENST00000456754 SPOUT1Q5T280 376 aaKnown RBP15.3■□□□□ 0.04
TIMP1-205ENST00000456754 JADE1Q6IE81 842 aa15.3■□□□□ 0.04
TIMP1-205ENST00000456754 CENPPQ6IPU0 288 aa15.3■□□□□ 0.04
TIMP1-205ENST00000456754 APBB1IPQ7Z5R6 666 aaPredicted RBP15.3■□□□□ 0.04
TIMP1-205ENST00000456754 C12orf56Q8IXR9 622 aa15.3■□□□□ 0.04
TIMP1-205ENST00000456754 EFCAB13Q8IY85 973 aa15.3■□□□□ 0.04
TIMP1-205ENST00000456754 URGCPQ8TCY9 931 aa15.3■□□□□ 0.04
TIMP1-205ENST00000456754 P2RX5Q93086 422 aa15.3■□□□□ 0.04
TIMP1-205ENST00000456754 PPP1R10Q96QC0 940 aaKnown RBP15.3■□□□□ 0.04
TIMP1-205ENST00000456754 RPS6KC1Q96S38 1066 aa15.3■□□□□ 0.04
TIMP1-205ENST00000456754 DUSP9Q99956 384 aaKnown RBP15.3■□□□□ 0.04
TIMP1-205ENST00000456754 GZF1Q9H116 711 aaPredicted RBP15.3■□□□□ 0.04
TIMP1-205ENST00000456754 PDE11AQ9HCR9 933 aa15.3■□□□□ 0.04
TIMP1-205ENST00000456754 CNTN3Q9P232 1028 aa15.3■□□□□ 0.04
TIMP1-205ENST00000456754 CHD7Q9P2D1 2997 aa15.3■□□□□ 0.04
TIMP1-205ENST00000456754 TUBGCP4Q9UGJ1 667 aa15.3■□□□□ 0.04
TIMP1-205ENST00000456754 EXOC3O60645 756 aa15.29■□□□□ 0.04
TIMP1-205ENST00000456754 CTNNB1P35222 781 aa15.29■□□□□ 0.04
TIMP1-205ENST00000456754 BCAR1P56945 870 aa15.29■□□□□ 0.04
TIMP1-205ENST00000456754 RNASELQ05823 741 aaKnown RBP15.29■□□□□ 0.04
TIMP1-205ENST00000456754 DSC1Q08554 894 aa15.29■□□□□ 0.04
TIMP1-205ENST00000456754 CEP135Q66GS9 1140 aa15.29■□□□□ 0.04
TIMP1-205ENST00000456754 C11orf57Q6ZUT1 292 aaPredicted RBP15.29■□□□□ 0.04
TIMP1-205ENST00000456754 BRSK2Q8IWQ3 736 aa15.29■□□□□ 0.04
TIMP1-205ENST00000456754 COLGALT2Q8IYK4 626 aa15.29■□□□□ 0.04
TIMP1-205ENST00000456754 TRIML1Q8N9V2 468 aa15.29■□□□□ 0.04
TIMP1-205ENST00000456754 XXYLT1Q8NBI6 393 aa15.29■□□□□ 0.04
TIMP1-205ENST00000456754 COLGALT1Q8NBJ5 622 aa15.29■□□□□ 0.04
TIMP1-205ENST00000456754 ARNTL2Q8WYA1 636 aa15.29■□□□□ 0.04
TIMP1-205ENST00000456754 FBXL18Q96ME1 805 aa15.29■□□□□ 0.04
TIMP1-205ENST00000456754 POP1Q99575 1024 aaKnown RBP15.29■□□□□ 0.04
TIMP1-205ENST00000456754 SLC28A3Q9HAS3 691 aa15.29■□□□□ 0.04
TIMP1-205ENST00000456754 UBN1Q9NPG3 1134 aa15.29■□□□□ 0.04
TIMP1-205ENST00000456754 TOPORSQ9NS56 1045 aaPredicted RBP15.29■□□□□ 0.04
TIMP1-205ENST00000456754 RBAKQ9NYW8 714 aaPredicted RBP15.29■□□□□ 0.04
TIMP1-205ENST00000456754 MYO7AQ13402 2215 aa15.28■□□□□ 0.04
TIMP1-205ENST00000456754 PPEF2O14830 753 aa15.28■□□□□ 0.04
TIMP1-205ENST00000456754 CALUO43852 315 aaPredicted RBP15.28■□□□□ 0.04
TIMP1-205ENST00000456754 AKAP3O75969 853 aa15.28■□□□□ 0.04
TIMP1-205ENST00000456754 ITGB1P05556 798 aa15.28■□□□□ 0.04
TIMP1-205ENST00000456754 KCNE1P15382 129 aa15.28■□□□□ 0.04
TIMP1-205ENST00000456754 NR2F2P24468 414 aa15.28■□□□□ 0.04
TIMP1-205ENST00000456754 CCNE1P24864 410 aa15.28■□□□□ 0.04
TIMP1-205ENST00000456754 PPP2R3AQ06190 1150 aa15.28■□□□□ 0.04
TIMP1-205ENST00000456754 GRIK3Q13003 919 aa15.28■□□□□ 0.04
TIMP1-205ENST00000456754 SNRNP35Q16560 246 aaKnown RBP15.28■□□□□ 0.04
TIMP1-205ENST00000456754 EPC2Q52LR7 807 aa15.28■□□□□ 0.04
TIMP1-205ENST00000456754 TTI2Q6NXR4 508 aa15.28■□□□□ 0.04
TIMP1-205ENST00000456754 HASPINQ8TF76 798 aa15.28■□□□□ 0.04
TIMP1-205ENST00000456754 GDPD5Q8WTR4 605 aa15.28■□□□□ 0.04
TIMP1-205ENST00000456754 CLP1Q92989 425 aaKnown RBP15.28■□□□□ 0.04
TIMP1-205ENST00000456754 KIF12Q96FN5 646 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms