RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 KAT5Q92993 513 aa11□□□□□ -0.65
CLIP4-208ENST00000456385 P2RX7Q99572 595 aaKnown RBP11□□□□□ -0.65
CLIP4-208ENST00000456385 NUP85Q9BW27 656 aa11□□□□□ -0.65
CLIP4-208ENST00000456385 EURLQ9NYK6 297 aa11□□□□□ -0.65
CLIP4-208ENST00000456385 ANAPC5Q9UJX4 755 aa11□□□□□ -0.65
CLIP4-208ENST00000456385 LOC102724428A0A0B4J2F2 783 aa10.99□□□□□ -0.65
CLIP4-208ENST00000456385 TULP1O00294 542 aaPredicted RBP10.99□□□□□ -0.65
CLIP4-208ENST00000456385 TCEA3O75764 348 aa10.99□□□□□ -0.65
CLIP4-208ENST00000456385 DCTN3O75935 186 aa10.99□□□□□ -0.65
CLIP4-208ENST00000456385 KRT36O76013 467 aa10.99□□□□□ -0.65
CLIP4-208ENST00000456385 SGPL1O95470 568 aa10.99□□□□□ -0.65
CLIP4-208ENST00000456385 SNHG28P0DPA3 235 aa10.99□□□□□ -0.65
CLIP4-208ENST00000456385 MARK3P27448 753 aa10.99□□□□□ -0.65
CLIP4-208ENST00000456385 RPA3P35244 121 aaPredicted RBP10.99□□□□□ -0.65
CLIP4-208ENST00000456385 SIK1P57059 783 aa10.99□□□□□ -0.65
CLIP4-208ENST00000456385 ZNF543Q08ER8 600 aa10.99□□□□□ -0.65
CLIP4-208ENST00000456385 CCDC6Q16204 474 aa10.99□□□□□ -0.65
CLIP4-208ENST00000456385 PDCD2Q16342 344 aaPredicted RBP10.99□□□□□ -0.65
CLIP4-208ENST00000456385 PLEKHG4Q58EX7 1191 aa10.99□□□□□ -0.65
CLIP4-208ENST00000456385 HP1BP3Q5SSJ5 553 aaPredicted RBP10.99□□□□□ -0.65
CLIP4-208ENST00000456385 IRGCQ6NXR0 463 aa10.99□□□□□ -0.65
CLIP4-208ENST00000456385 C4orf50Q6ZRC1 276 aa10.99□□□□□ -0.65
CLIP4-208ENST00000456385 ZNF804AQ7Z570 1209 aa10.99□□□□□ -0.65
CLIP4-208ENST00000456385 ZC3H18Q86VM9 953 aaKnown RBP10.99□□□□□ -0.65
CLIP4-208ENST00000456385 ANKRD35Q8N283 1001 aa10.99□□□□□ -0.65
CLIP4-208ENST00000456385 MYCT1Q8N699 235 aa10.99□□□□□ -0.65
CLIP4-208ENST00000456385 DRAXINQ8NBI3 349 aaPredicted RBP10.99□□□□□ -0.65
CLIP4-208ENST00000456385 LMO3Q8TAP4 145 aa10.99□□□□□ -0.65
CLIP4-208ENST00000456385 ETNPPLQ8TBG4 499 aa10.99□□□□□ -0.65
CLIP4-208ENST00000456385 ZNF564Q8TBZ8 553 aaPredicted RBP10.99□□□□□ -0.65
CLIP4-208ENST00000456385 DTX3LQ8TDB6 740 aa10.99□□□□□ -0.65
CLIP4-208ENST00000456385 MAML1Q92585 1016 aa10.99□□□□□ -0.65
CLIP4-208ENST00000456385 EZH1Q92800 747 aaPredicted RBP10.99□□□□□ -0.65
CLIP4-208ENST00000456385 MRRFQ96E11 262 aaKnown RBP10.99□□□□□ -0.65
CLIP4-208ENST00000456385 GORASP1Q9BQQ3 440 aa10.99□□□□□ -0.65
CLIP4-208ENST00000456385 CADM1Q9BY67 442 aaKnown RBP10.99□□□□□ -0.65
CLIP4-208ENST00000456385 VCXQ9H320 206 aa10.99□□□□□ -0.65
CLIP4-208ENST00000456385 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.99□□□□□ -0.65
CLIP4-208ENST00000456385 IRS2Q9Y4H2 1338 aa10.99□□□□□ -0.65
CLIP4-208ENST00000456385 ZBTB5O15062 677 aa10.98□□□□□ -0.65
CLIP4-208ENST00000456385 MAGEB2O15479 319 aa10.98□□□□□ -0.65
CLIP4-208ENST00000456385 EDF1O60869 148 aaKnown RBP10.98□□□□□ -0.65
CLIP4-208ENST00000456385 AKR1B1P15121 316 aa10.98□□□□□ -0.65
CLIP4-208ENST00000456385 RRM1P23921 792 aa10.98□□□□□ -0.65
CLIP4-208ENST00000456385 PTPN4P29074 926 aa10.98□□□□□ -0.65
CLIP4-208ENST00000456385 VHLP40337 213 aa10.98□□□□□ -0.65
CLIP4-208ENST00000456385 GSTO1P78417 241 aa10.98□□□□□ -0.65
CLIP4-208ENST00000456385 CERKLQ49MI3 558 aaPredicted RBP10.98□□□□□ -0.65
CLIP4-208ENST00000456385 PPP1R18Q6NYC8 613 aa10.98□□□□□ -0.65
CLIP4-208ENST00000456385 WDR66Q8TBY9 1149 aa10.98□□□□□ -0.65
CLIP4-208ENST00000456385 FGD4Q96M96 766 aa10.98□□□□□ -0.65
CLIP4-208ENST00000456385 DDX50Q9BQ39 737 aaKnown RBP10.98□□□□□ -0.65
CLIP4-208ENST00000456385 ANO3Q9BYT9 981 aa10.98□□□□□ -0.65
CLIP4-208ENST00000456385 ANKRD2Q9GZV1 360 aa10.98□□□□□ -0.65
CLIP4-208ENST00000456385 UBN1Q9NPG3 1134 aa10.98□□□□□ -0.65
CLIP4-208ENST00000456385 STOML1Q9UBI4 398 aa10.98□□□□□ -0.65
CLIP4-208ENST00000456385 SCOCQ9UIL1 159 aa10.98□□□□□ -0.65
CLIP4-208ENST00000456385 ZFP69BQ9UJL9 534 aa10.98□□□□□ -0.65
CLIP4-208ENST00000456385 ZNF652Q9Y2D9 606 aa10.98□□□□□ -0.65
CLIP4-208ENST00000456385 R3HDM2Q9Y2K5 976 aaKnown RBP10.98□□□□□ -0.65
CLIP4-208ENST00000456385 LRCH1Q9Y2L9 728 aa10.98□□□□□ -0.65
CLIP4-208ENST00000456385 ARFGEF1Q9Y6D6 1849 aa10.98□□□□□ -0.65
CLIP4-208ENST00000456385 FAM86B1E9PN63 330 aa10.98□□□□□ -0.65
CLIP4-208ENST00000456385 TRAFD1O14545 582 aaPredicted RBP10.98□□□□□ -0.65
CLIP4-208ENST00000456385 FAM86B2P0C5J1 330 aa10.98□□□□□ -0.65
CLIP4-208ENST00000456385 ATF2P15336 505 aa10.98□□□□□ -0.65
CLIP4-208ENST00000456385 GCAP28676 217 aa10.98□□□□□ -0.65
CLIP4-208ENST00000456385 RASSF2P50749 326 aa10.98□□□□□ -0.65
CLIP4-208ENST00000456385 CDR2Q01850 454 aa10.98□□□□□ -0.65
CLIP4-208ENST00000456385 KPNB1Q14974 876 aaKnown RBP10.98□□□□□ -0.65
CLIP4-208ENST00000456385 SLC1A5Q15758 541 aa10.98□□□□□ -0.65
CLIP4-208ENST00000456385 CTC1Q2NKJ3 1217 aa10.98□□□□□ -0.65
CLIP4-208ENST00000456385 ACSBG2Q5FVE4 666 aa10.98□□□□□ -0.65
CLIP4-208ENST00000456385 DAB2IPQ5VWQ8 1189 aa10.98□□□□□ -0.65
CLIP4-208ENST00000456385 RINT1Q6NUQ1 792 aa10.98□□□□□ -0.65
CLIP4-208ENST00000456385 DPP8Q6V1X1 898 aaPredicted RBP10.98□□□□□ -0.65
CLIP4-208ENST00000456385 NOP9Q86U38 636 aaKnown RBP10.98□□□□□ -0.65
CLIP4-208ENST00000456385 TRABD2AQ86V40 505 aa10.98□□□□□ -0.65
CLIP4-208ENST00000456385 CCDC125Q86Z20 511 aa10.98□□□□□ -0.65
CLIP4-208ENST00000456385 SLFN12Q8IYM2 578 aa10.98□□□□□ -0.65
CLIP4-208ENST00000456385 B4GALNT2Q8NHY0 566 aa10.98□□□□□ -0.65
CLIP4-208ENST00000456385 CYP2W1Q8TAV3 490 aa10.98□□□□□ -0.65
CLIP4-208ENST00000456385 DENND1AQ8TEH3 1009 aa10.98□□□□□ -0.65
CLIP4-208ENST00000456385 PSPC1Q8WXF1 523 aaKnown RBP10.98□□□□□ -0.65
CLIP4-208ENST00000456385 SLCO2A1Q92959 643 aa10.98□□□□□ -0.65
CLIP4-208ENST00000456385 NPHS2Q9NP85 383 aa10.98□□□□□ -0.65
CLIP4-208ENST00000456385 DCTN4Q9UJW0 460 aa10.98□□□□□ -0.65
CLIP4-208ENST00000456385 FRMD4BQ9Y2L6 1034 aa10.98□□□□□ -0.65
CLIP4-208ENST00000456385 LAMB2P55268 1798 aa10.97□□□□□ -0.65
CLIP4-208ENST00000456385 GSTTP1A0A1W2PQM5 241 aa10.97□□□□□ -0.65
CLIP4-208ENST00000456385 POC1B-GALNT4F8VUJ3 575 aa10.97□□□□□ -0.65
CLIP4-208ENST00000456385 CAPN9O14815 690 aa10.97□□□□□ -0.65
CLIP4-208ENST00000456385 FSCN2O14926 492 aa10.97□□□□□ -0.65
CLIP4-208ENST00000456385 RAD21O60216 631 aa10.97□□□□□ -0.65
CLIP4-208ENST00000456385 TBX10O75333 385 aa10.97□□□□□ -0.65
CLIP4-208ENST00000456385 KCNA3P22001 575 aa10.97□□□□□ -0.65
CLIP4-208ENST00000456385 CACNA2D1P54289 1103 aa10.97□□□□□ -0.65
CLIP4-208ENST00000456385 KCNQ4P56696 695 aa10.97□□□□□ -0.65
CLIP4-208ENST00000456385 PKN2Q16513 984 aaKnown RBP10.97□□□□□ -0.65
CLIP4-208ENST00000456385 TBC1D9BQ66K14 1250 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms