RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 PRPF39Q86UA1 669 aaKnown RBP5.28□□□□□ -1.56
PCDH9-203ENST00000456367 IQCKQ8N0W5 287 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 ZNF555Q8NEP9 628 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 SLC35G2Q8TBE7 412 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 E2F7Q96AV8 911 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 FAF2Q96CS3 445 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 MRPS26Q9BYN8 205 aaKnown RBP5.28□□□□□ -1.56
PCDH9-203ENST00000456367 AGXT2Q9BYV1 514 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 R3HDM2Q9Y2K5 976 aaKnown RBP5.28□□□□□ -1.56
PCDH9-203ENST00000456367 TBX22Q9Y458 520 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 INO80Q9ULG1 1556 aaPredicted RBP5.28□□□□□ -1.56
PCDH9-203ENST00000456367 CDC42BPBQ9Y5S2 1711 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 MATN2O00339 956 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 LCA5LO95447 670 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 SNRPAP09012 282 aaKnown RBP5.28□□□□□ -1.56
PCDH9-203ENST00000456367 NUDT17P0C025 328 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 THRAP10827 490 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 BLVRAP53004 296 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 ALDH18A1P54886 795 aaKnown RBP5.28□□□□□ -1.56
PCDH9-203ENST00000456367 AMPD2Q01433 879 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 KRT76Q01546 638 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 DMP1Q13316 513 aaPredicted RBP5.28□□□□□ -1.56
PCDH9-203ENST00000456367 ZNF268Q14587 947 aaPredicted RBP5.28□□□□□ -1.56
PCDH9-203ENST00000456367 USH1GQ495M9 461 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 TPTE2Q6XPS3 522 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 NET1Q7Z628 596 aaPredicted RBP5.28□□□□□ -1.56
PCDH9-203ENST00000456367 DDX42Q86XP3 938 aaKnown RBP eCLIP5.28□□□□□ -1.56
PCDH9-203ENST00000456367 PLD3Q8IV08 490 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 PCYOX1LQ8NBM8 494 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 KCTD6Q8NC69 237 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 RFWD2Q8NHY2 731 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 CKAP2Q8WWK9 683 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 TUBGCP3Q96CW5 907 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 ACAP3Q96P50 834 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 UBXN6Q9BZV1 441 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 GPHNQ9NQX3 736 aaPredicted RBP5.28□□□□□ -1.56
PCDH9-203ENST00000456367 COPG2Q9UBF2 871 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 CAPN6Q9Y6Q1 641 aa5.28□□□□□ -1.56
PCDH9-203ENST00000456367 TET3O43151 1660 aa5.27□□□□□ -1.57
PCDH9-203ENST00000456367 A0A087WXM4 84 aa5.27□□□□□ -1.57
PCDH9-203ENST00000456367 ZNF233A6NK53 670 aa5.27□□□□□ -1.57
PCDH9-203ENST00000456367 H2AFYO75367 372 aaKnown RBP5.27□□□□□ -1.57
PCDH9-203ENST00000456367 ALOX5P09917 674 aa5.27□□□□□ -1.57
PCDH9-203ENST00000456367 ATP6V1B1P15313 513 aa5.27□□□□□ -1.57
PCDH9-203ENST00000456367 UCHL3P15374 230 aa5.27□□□□□ -1.57
PCDH9-203ENST00000456367 CASP1P29466 404 aa5.27□□□□□ -1.57
PCDH9-203ENST00000456367 ATICP31939 592 aa5.27□□□□□ -1.57
PCDH9-203ENST00000456367 PIK3CAP42336 1068 aa5.27□□□□□ -1.57
PCDH9-203ENST00000456367 PTDSS1P48651 473 aaKnown RBP5.27□□□□□ -1.57
PCDH9-203ENST00000456367 LIG4P49917 911 aa5.27□□□□□ -1.57
PCDH9-203ENST00000456367 CHN2P52757 468 aa5.27□□□□□ -1.57
PCDH9-203ENST00000456367 OCRLQ01968 901 aa5.27□□□□□ -1.57
PCDH9-203ENST00000456367 PABPC4Q13310 644 aaKnown RBP eCLIP5.27□□□□□ -1.57
PCDH9-203ENST00000456367 AP3B2Q13367 1082 aa5.27□□□□□ -1.57
PCDH9-203ENST00000456367 PPM1NQ8N819 430 aa5.27□□□□□ -1.57
PCDH9-203ENST00000456367 SCFD1Q8WVM8 642 aa5.27□□□□□ -1.57
PCDH9-203ENST00000456367 LRRC59Q96AG4 307 aaKnown RBP5.27□□□□□ -1.57
PCDH9-203ENST00000456367 MKNK1Q9BUB5 465 aa5.27□□□□□ -1.57
PCDH9-203ENST00000456367 C1orf50Q9BV19 199 aa5.27□□□□□ -1.57
PCDH9-203ENST00000456367 FHDC1Q9C0D6 1143 aaPredicted RBP5.27□□□□□ -1.57
PCDH9-203ENST00000456367 LACRTQ9GZZ8 138 aa5.27□□□□□ -1.57
PCDH9-203ENST00000456367 INTS2Q9H0H0 1204 aaKnown RBP5.27□□□□□ -1.57
PCDH9-203ENST00000456367 GJB4Q9NTQ9 266 aa5.27□□□□□ -1.57
PCDH9-203ENST00000456367 ABCF3Q9NUQ8 709 aa5.27□□□□□ -1.57
PCDH9-203ENST00000456367 GALNT8Q9NY28 637 aa5.27□□□□□ -1.57
PCDH9-203ENST00000456367 ADAM22Q9P0K1 906 aa5.27□□□□□ -1.57
PCDH9-203ENST00000456367 HERC5Q9UII4 1024 aaKnown RBP5.27□□□□□ -1.57
PCDH9-203ENST00000456367 CAB39Q9Y376 341 aaPredicted RBP5.27□□□□□ -1.57
PCDH9-203ENST00000456367 NEU2Q9Y3R4 380 aa5.27□□□□□ -1.57
PCDH9-203ENST00000456367 MROH7Q68CQ1 1323 aa5.27□□□□□ -1.57
PCDH9-203ENST00000456367 WDR64B1ANS9 1081 aa5.27□□□□□ -1.57
PCDH9-203ENST00000456367 H7C1W4 665 aa5.27□□□□□ -1.57
PCDH9-203ENST00000456367 AP3B1O00203 1094 aa5.27□□□□□ -1.57
PCDH9-203ENST00000456367 P4HA2O15460 535 aa5.27□□□□□ -1.57
PCDH9-203ENST00000456367 KLHL41O60662 606 aa5.27□□□□□ -1.57
PCDH9-203ENST00000456367 ZNF200P98182 395 aaPredicted RBP5.27□□□□□ -1.57
PCDH9-203ENST00000456367 FLOT2Q14254 428 aa5.27□□□□□ -1.57
PCDH9-203ENST00000456367 BSPRYQ5W0U4 402 aa5.27□□□□□ -1.57
PCDH9-203ENST00000456367 CYB5R4Q7L1T6 521 aa5.27□□□□□ -1.57
PCDH9-203ENST00000456367 RBM12BQ8IXT5 1001 aaKnown RBP5.27□□□□□ -1.57
PCDH9-203ENST00000456367 DRAXINQ8NBI3 349 aaPredicted RBP5.27□□□□□ -1.57
PCDH9-203ENST00000456367 TSEN2Q8NCE0 465 aaKnown RBP5.27□□□□□ -1.57
PCDH9-203ENST00000456367 VPS39Q96JC1 886 aa5.27□□□□□ -1.57
PCDH9-203ENST00000456367 TMEM237Q96Q45 408 aa5.27□□□□□ -1.57
PCDH9-203ENST00000456367 SETDB2Q96T68 719 aa5.27□□□□□ -1.57
PCDH9-203ENST00000456367 CAAP1Q9H8G2 361 aa5.27□□□□□ -1.57
PCDH9-203ENST00000456367 POLE3Q9NRF9 147 aa5.27□□□□□ -1.57
PCDH9-203ENST00000456367 GRID1Q9ULK0 1009 aa5.27□□□□□ -1.57
PCDH9-203ENST00000456367 CROCC2H7BZ55 1655 aa5.27□□□□□ -1.57
PCDH9-203ENST00000456367 AFF2P51816 1311 aa5.27□□□□□ -1.57
PCDH9-203ENST00000456367 GOLGA8TH3BQL2 631 aa5.27□□□□□ -1.57
PCDH9-203ENST00000456367 TBC1D4O60343 1298 aa5.27□□□□□ -1.57
PCDH9-203ENST00000456367 GOLGA8HP0CJ92 632 aa5.27□□□□□ -1.57
PCDH9-203ENST00000456367 C16orf72Q14CZ0 275 aa5.27□□□□□ -1.57
PCDH9-203ENST00000456367 SGSM1Q2NKQ1 1148 aa5.27□□□□□ -1.57
PCDH9-203ENST00000456367 GET4Q7L5D6 327 aaPredicted RBP5.27□□□□□ -1.57
PCDH9-203ENST00000456367 DPH6Q7L8W6 267 aa5.27□□□□□ -1.57
PCDH9-203ENST00000456367 ERICH1Q86X53 443 aa5.27□□□□□ -1.57
PCDH9-203ENST00000456367 SLC13A5Q86YT5 568 aaPredicted RBP5.27□□□□□ -1.57
PCDH9-203ENST00000456367 TBC1D10CQ8IV04 446 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms