RNA–Protein interactions for RNA: ENST00000455551.6

SEMA4D-213, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 3,594 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-213ENST00000455551 TNNI1P19237 187 aa13.1□□□□□ -0.31
SEMA4D-213ENST00000455551 COILP38432 576 aaPredicted RBP13.1□□□□□ -0.31
SEMA4D-213ENST00000455551 RWDD2BP57060 319 aa13.1□□□□□ -0.31
SEMA4D-213ENST00000455551 ZNF516Q92618 1163 aa13.1□□□□□ -0.31
SEMA4D-213ENST00000455551 TMEM143Q96AN5 459 aa13.1□□□□□ -0.31
SEMA4D-213ENST00000455551 C1orf112Q9NSG2 853 aa13.1□□□□□ -0.31
SEMA4D-213ENST00000455551 MTUS1Q9ULD2 1270 aa13.1□□□□□ -0.31
SEMA4D-213ENST00000455551 MTA2O94776 668 aa13.1□□□□□ -0.31
SEMA4D-213ENST00000455551 STBD1O95210 358 aa13.1□□□□□ -0.31
SEMA4D-213ENST00000455551 FAM107AO95990 144 aa13.1□□□□□ -0.31
SEMA4D-213ENST00000455551 HSPA6P17066 643 aa13.1□□□□□ -0.31
SEMA4D-213ENST00000455551 MAPK4P31152 587 aa13.1□□□□□ -0.31
SEMA4D-213ENST00000455551 GMPSP49915 693 aaPredicted RBP13.1□□□□□ -0.31
SEMA4D-213ENST00000455551 LIG4P49917 911 aa13.1□□□□□ -0.31
SEMA4D-213ENST00000455551 ACTR2P61160 394 aa13.1□□□□□ -0.31
SEMA4D-213ENST00000455551 ACAD10Q6JQN1 1059 aa13.1□□□□□ -0.31
SEMA4D-213ENST00000455551 PASD1Q8IV76 773 aa13.1□□□□□ -0.31
SEMA4D-213ENST00000455551 TMC2Q8TDI7 906 aa13.1□□□□□ -0.31
SEMA4D-213ENST00000455551 ATG4AQ8WYN0 398 aa13.1□□□□□ -0.31
SEMA4D-213ENST00000455551 GPRASP2Q96D09 838 aa13.1□□□□□ -0.31
SEMA4D-213ENST00000455551 SELENOSQ9BQE4 189 aa13.1□□□□□ -0.31
SEMA4D-213ENST00000455551 PABPC3Q9H361 631 aaKnown RBP13.1□□□□□ -0.31
SEMA4D-213ENST00000455551 PCYOX1Q9UHG3 505 aa13.1□□□□□ -0.31
SEMA4D-213ENST00000455551 PCDHA3Q9Y5H8 950 aa13.1□□□□□ -0.31
SEMA4D-213ENST00000455551 GRIN3BO60391 1043 aa13.1□□□□□ -0.31
SEMA4D-213ENST00000455551 PEX10O60683 326 aa13.1□□□□□ -0.31
SEMA4D-213ENST00000455551 PSAPP07602 524 aa13.1□□□□□ -0.31
SEMA4D-213ENST00000455551 IFT88Q13099 833 aa13.1□□□□□ -0.31
SEMA4D-213ENST00000455551 PPP1R7Q15435 360 aa13.1□□□□□ -0.31
SEMA4D-213ENST00000455551 TRIP13Q15645 432 aaPredicted RBP13.1□□□□□ -0.31
SEMA4D-213ENST00000455551 CLUL1Q15846 466 aa13.1□□□□□ -0.31
SEMA4D-213ENST00000455551 QPCTQ16769 361 aa13.1□□□□□ -0.31
SEMA4D-213ENST00000455551 NSUN6Q8TEA1 469 aaKnown RBP13.1□□□□□ -0.31
SEMA4D-213ENST00000455551 SPIRE2Q8WWL2 714 aa13.1□□□□□ -0.31
SEMA4D-213ENST00000455551 CYFIP2Q96F07 1278 aa13.1□□□□□ -0.31
SEMA4D-213ENST00000455551 IFT74Q96LB3 600 aa13.1□□□□□ -0.31
SEMA4D-213ENST00000455551 FBXL18Q96ME1 805 aa13.1□□□□□ -0.31
SEMA4D-213ENST00000455551 AZI2Q9H6S1 392 aa13.1□□□□□ -0.31
SEMA4D-213ENST00000455551 ATP6V0A4Q9HBG4 840 aa13.1□□□□□ -0.31
SEMA4D-213ENST00000455551 CYP26B1Q9NR63 512 aa13.1□□□□□ -0.31
SEMA4D-213ENST00000455551 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.1□□□□□ -0.31
SEMA4D-213ENST00000455551 PIM2Q9P1W9 311 aa13.1□□□□□ -0.31
SEMA4D-213ENST00000455551 SLC9A2Q9UBY0 812 aa13.1□□□□□ -0.31
SEMA4D-213ENST00000455551 WDR81Q562E7 1941 aa13.09□□□□□ -0.31
SEMA4D-213ENST00000455551 HARSP12081 509 aaKnown RBP13.09□□□□□ -0.31
SEMA4D-213ENST00000455551 RRM1P23921 792 aa13.09□□□□□ -0.31
SEMA4D-213ENST00000455551 PRKG1Q13976 671 aa13.09□□□□□ -0.31
SEMA4D-213ENST00000455551 TCEAL1Q15170 157 aa13.09□□□□□ -0.31
SEMA4D-213ENST00000455551 CLEC16AQ2KHT3 1053 aa13.09□□□□□ -0.31
SEMA4D-213ENST00000455551 CHADLQ6NUI6 762 aa13.09□□□□□ -0.31
SEMA4D-213ENST00000455551 OTUD6BQ8N6M0 293 aa13.09□□□□□ -0.31
SEMA4D-213ENST00000455551 ZNF526Q8TF50 670 aaPredicted RBP13.09□□□□□ -0.31
SEMA4D-213ENST00000455551 RAPGEF5Q92565 580 aa13.09□□□□□ -0.31
SEMA4D-213ENST00000455551 HVCN1Q96D96 273 aa13.09□□□□□ -0.31
SEMA4D-213ENST00000455551 UVRAGQ9P2Y5 699 aa13.09□□□□□ -0.31
SEMA4D-213ENST00000455551 GMNCA6NCL1 334 aa13.09□□□□□ -0.31
SEMA4D-213ENST00000455551 DGAT1O75907 488 aa13.09□□□□□ -0.31
SEMA4D-213ENST00000455551 GJC1P36383 396 aa13.09□□□□□ -0.31
SEMA4D-213ENST00000455551 NLRP11P59045 1033 aaKnown RBP13.09□□□□□ -0.31
SEMA4D-213ENST00000455551 TMEM132BQ14DG7 1078 aa13.09□□□□□ -0.31
SEMA4D-213ENST00000455551 SIX1Q15475 284 aaPredicted RBP13.09□□□□□ -0.31
SEMA4D-213ENST00000455551 USP37Q86T82 979 aa13.09□□□□□ -0.31
SEMA4D-213ENST00000455551 ZNF280CQ8ND82 737 aa13.09□□□□□ -0.31
SEMA4D-213ENST00000455551 ZBTB45Q96K62 511 aaPredicted RBP13.09□□□□□ -0.31
SEMA4D-213ENST00000455551 FNBP1Q96RU3 617 aa13.09□□□□□ -0.31
SEMA4D-213ENST00000455551 FAM118BQ9BPY3 351 aa13.09□□□□□ -0.31
SEMA4D-213ENST00000455551 PICK1Q9NRD5 415 aa13.09□□□□□ -0.31
SEMA4D-213ENST00000455551 DNAJC17Q9NVM6 304 aaKnown RBP13.09□□□□□ -0.31
SEMA4D-213ENST00000455551 ANKFY1Q9P2R3 1169 aa13.09□□□□□ -0.31
SEMA4D-213ENST00000455551 MTRF1LQ9UGC7 380 aaKnown RBP13.09□□□□□ -0.31
SEMA4D-213ENST00000455551 COL11A1P12107 1806 aaPredicted RBP13.09□□□□□ -0.31
SEMA4D-213ENST00000455551 PDE4CQ08493 712 aa13.09□□□□□ -0.31
SEMA4D-213ENST00000455551 SEZ6Q53EL9 994 aa13.09□□□□□ -0.31
SEMA4D-213ENST00000455551 HOOK3Q86VS8 718 aa13.09□□□□□ -0.31
SEMA4D-213ENST00000455551 SAMD3Q8N6K7 520 aa13.09□□□□□ -0.31
SEMA4D-213ENST00000455551 MCPH1Q8NEM0 835 aa13.09□□□□□ -0.31
SEMA4D-213ENST00000455551 EPS8L3Q8TE67 593 aaKnown RBP13.09□□□□□ -0.31
SEMA4D-213ENST00000455551 NTPCRQ9BSD7 190 aaKnown RBP13.09□□□□□ -0.31
SEMA4D-213ENST00000455551 A1CFQ9NQ94 594 aaKnown RBP13.09□□□□□ -0.31
SEMA4D-213ENST00000455551 ZNF214Q9UL59 606 aaPredicted RBP13.09□□□□□ -0.31
SEMA4D-213ENST00000455551 PTPRJQ12913 1337 aa13.08□□□□□ -0.32
SEMA4D-213ENST00000455551 PODXLO00592 558 aa13.08□□□□□ -0.32
SEMA4D-213ENST00000455551 CFHP08603 1231 aa13.08□□□□□ -0.32
SEMA4D-213ENST00000455551 SCP2P22307 547 aa13.08□□□□□ -0.32
SEMA4D-213ENST00000455551 PIK3CAP42336 1068 aa13.08□□□□□ -0.32
SEMA4D-213ENST00000455551 POLGP54098 1239 aaPredicted RBP13.08□□□□□ -0.32
SEMA4D-213ENST00000455551 EIF3BP55884 814 aaKnown RBP13.08□□□□□ -0.32
SEMA4D-213ENST00000455551 IFI35P80217 286 aaPredicted RBP13.08□□□□□ -0.32
SEMA4D-213ENST00000455551 SGO2Q562F6 1265 aa13.08□□□□□ -0.32
SEMA4D-213ENST00000455551 ZBTB41Q5SVQ8 909 aa13.08□□□□□ -0.32
SEMA4D-213ENST00000455551 KAT2BQ92831 832 aa13.08□□□□□ -0.32
SEMA4D-213ENST00000455551 HERPUD2Q9BSE4 406 aa13.08□□□□□ -0.32
SEMA4D-213ENST00000455551 CCDC113Q9H0I3 377 aa13.08□□□□□ -0.32
SEMA4D-213ENST00000455551 LRRIQ4A6NIV6 560 aa13.08□□□□□ -0.32
SEMA4D-213ENST00000455551 O00370 1275 aa13.08□□□□□ -0.32
SEMA4D-213ENST00000455551 MEFVO15553 781 aaPredicted RBP13.08□□□□□ -0.32
SEMA4D-213ENST00000455551 TRAPPC3O43617 180 aa13.08□□□□□ -0.32
SEMA4D-213ENST00000455551 ECEL1O95672 775 aa13.08□□□□□ -0.32
SEMA4D-213ENST00000455551 HLA-DRAP01903 254 aa13.08□□□□□ -0.32
SEMA4D-213ENST00000455551 PTPRAP18433 802 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms