RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 CYP4F8P98187 520 aa4.42□□□□□ -1.7
RBM39-220ENST00000455343 BEX3Q00994 111 aa4.42□□□□□ -1.7
RBM39-220ENST00000455343 CBX2Q14781 532 aaPredicted RBP4.42□□□□□ -1.7
RBM39-220ENST00000455343 GPNMBQ14956 572 aa4.42□□□□□ -1.7
RBM39-220ENST00000455343 FSCN1Q16658 493 aaKnown RBP4.42□□□□□ -1.7
RBM39-220ENST00000455343 TDRD10Q5VZ19 366 aaKnown RBP4.42□□□□□ -1.7
RBM39-220ENST00000455343 ARMCX2Q7L311 632 aa4.42□□□□□ -1.7
RBM39-220ENST00000455343 HERC6Q8IVU3 1022 aa4.42□□□□□ -1.7
RBM39-220ENST00000455343 FAM133AQ8N9E0 248 aa4.42□□□□□ -1.7
RBM39-220ENST00000455343 NEK9Q8TD19 979 aa4.42□□□□□ -1.7
RBM39-220ENST00000455343 SSH3Q8TE77 659 aa4.42□□□□□ -1.7
RBM39-220ENST00000455343 EAF2Q96CJ1 260 aaPredicted RBP4.42□□□□□ -1.7
RBM39-220ENST00000455343 DDX11Q96FC9 970 aa4.42□□□□□ -1.7
RBM39-220ENST00000455343 DYNLL2Q96FJ2 89 aa4.42□□□□□ -1.7
RBM39-220ENST00000455343 SLC12A9Q9BXP2 914 aa4.42□□□□□ -1.7
RBM39-220ENST00000455343 SRRTQ9BXP5 876 aaKnown RBP4.42□□□□□ -1.7
RBM39-220ENST00000455343 ALDH8A1Q9H2A2 487 aaPredicted RBP4.42□□□□□ -1.7
RBM39-220ENST00000455343 UBE2ZQ9H832 354 aaPredicted RBP4.42□□□□□ -1.7
RBM39-220ENST00000455343 KANSL2Q9H9L4 492 aa4.42□□□□□ -1.7
RBM39-220ENST00000455343 MCM9Q9NXL9 1143 aa4.42□□□□□ -1.7
RBM39-220ENST00000455343 RTEL1Q9NZ71 1219 aa4.42□□□□□ -1.7
RBM39-220ENST00000455343 NOP58Q9Y2X3 529 aaKnown RBP4.42□□□□□ -1.7
RBM39-220ENST00000455343 PRRC2BQ5JSZ5 2229 aaKnown RBP4.42□□□□□ -1.7
RBM39-220ENST00000455343 DMDP11532 3685 aa4.42□□□□□ -1.7
RBM39-220ENST00000455343 ATAD5Q96QE3 1844 aa4.42□□□□□ -1.7
RBM39-220ENST00000455343 DCHS1Q96JQ0 3298 aa4.41□□□□□ -1.7
RBM39-220ENST00000455343 MYH13Q9UKX3 1938 aa4.41□□□□□ -1.7
RBM39-220ENST00000455343 TCRBV5S4A2TA0A5A2 114 aa4.41□□□□□ -1.7
RBM39-220ENST00000455343 KIF28PB7ZC32 967 aa4.41□□□□□ -1.7
RBM39-220ENST00000455343 GNAI2P04899 355 aa4.41□□□□□ -1.7
RBM39-220ENST00000455343 GSTM1P09488 218 aa4.41□□□□□ -1.7
RBM39-220ENST00000455343 IQCF3P0C7M6 154 aa4.41□□□□□ -1.7
RBM39-220ENST00000455343 SUPT20HL2P0C7V6 817 aa4.41□□□□□ -1.7
RBM39-220ENST00000455343 CYP2D6P10635 497 aa4.41□□□□□ -1.7
RBM39-220ENST00000455343 ZNF16P17020 682 aaPredicted RBP4.41□□□□□ -1.7
RBM39-220ENST00000455343 PTGS1P23219 599 aa4.41□□□□□ -1.7
RBM39-220ENST00000455343 RFC2P35250 354 aa4.41□□□□□ -1.7
RBM39-220ENST00000455343 OAZ1P54368 228 aa4.41□□□□□ -1.7
RBM39-220ENST00000455343 ERVK-21P61565 698 aa4.41□□□□□ -1.7
RBM39-220ENST00000455343 FANCCQ00597 558 aa4.41□□□□□ -1.7
RBM39-220ENST00000455343 TNFAIP2Q03169 654 aa4.41□□□□□ -1.7
RBM39-220ENST00000455343 MVKQ03426 396 aa4.41□□□□□ -1.7
RBM39-220ENST00000455343 PLEKHN1Q494U1 663 aaPredicted RBP4.41□□□□□ -1.7
RBM39-220ENST00000455343 FAM83BQ5T0W9 1011 aa4.41□□□□□ -1.7
RBM39-220ENST00000455343 TMEM63BQ5T3F8 832 aa4.41□□□□□ -1.7
RBM39-220ENST00000455343 C12orf60Q5U649 245 aa4.41□□□□□ -1.7
RBM39-220ENST00000455343 CWF19L1Q69YN2 538 aaKnown RBP4.41□□□□□ -1.7
RBM39-220ENST00000455343 SNRNP48Q6IEG0 339 aaKnown RBP4.41□□□□□ -1.7
RBM39-220ENST00000455343 TAPT1Q6NXT6 567 aa4.41□□□□□ -1.7
RBM39-220ENST00000455343 RPTNQ6XPR3 784 aa4.41□□□□□ -1.7
RBM39-220ENST00000455343 BMP8AQ7Z5Y6 402 aa4.41□□□□□ -1.7
RBM39-220ENST00000455343 TLK2Q86UE8 772 aa4.41□□□□□ -1.7
RBM39-220ENST00000455343 FAM129CQ86XR2 697 aa4.41□□□□□ -1.7
RBM39-220ENST00000455343 NAT16Q8N8M0 369 aa4.41□□□□□ -1.7
RBM39-220ENST00000455343 PRPF38AQ8NAV1 312 aaKnown RBP4.41□□□□□ -1.7
RBM39-220ENST00000455343 CHST13Q8NET6 341 aa4.41□□□□□ -1.7
RBM39-220ENST00000455343 SDR42E1Q8WUS8 393 aa4.41□□□□□ -1.7
RBM39-220ENST00000455343 ANKS1AQ92625 1134 aa4.41□□□□□ -1.7
RBM39-220ENST00000455343 TM9SF2Q99805 663 aa4.41□□□□□ -1.7
RBM39-220ENST00000455343 XYLT2Q9H1B5 865 aa4.41□□□□□ -1.7
RBM39-220ENST00000455343 SLC38A10Q9HBR0 1119 aa4.41□□□□□ -1.7
RBM39-220ENST00000455343 ALG13Q9NP73 1137 aaKnown RBP4.41□□□□□ -1.7
RBM39-220ENST00000455343 FBXO40Q9UH90 709 aa4.41□□□□□ -1.7
RBM39-220ENST00000455343 PCDHA5Q9Y5H7 936 aa4.41□□□□□ -1.7
RBM39-220ENST00000455343 TNKSO95271 1327 aa4.41□□□□□ -1.7
RBM39-220ENST00000455343 SMCHD1A6NHR9 2005 aa4.4□□□□□ -1.7
RBM39-220ENST00000455343 LCHNA4D1U4 455 aa4.4□□□□□ -1.71
RBM39-220ENST00000455343 F5H6K3 240 aa4.4□□□□□ -1.71
RBM39-220ENST00000455343 FGF10O15520 208 aaPredicted RBP4.4□□□□□ -1.71
RBM39-220ENST00000455343 ZEB2O60315 1214 aa4.4□□□□□ -1.71
RBM39-220ENST00000455343 BAIAP3O94812 1187 aa4.4□□□□□ -1.71
RBM39-220ENST00000455343 GJB5O95377 273 aa4.4□□□□□ -1.71
RBM39-220ENST00000455343 NDUFB10O96000 172 aa4.4□□□□□ -1.71
RBM39-220ENST00000455343 MSL3P1P0C860 447 aa4.4□□□□□ -1.71
RBM39-220ENST00000455343 CYP2C9P11712 490 aa4.4□□□□□ -1.71
RBM39-220ENST00000455343 ACTN1P12814 892 aa4.4□□□□□ -1.71
RBM39-220ENST00000455343 PDE6AP16499 860 aa4.4□□□□□ -1.71
RBM39-220ENST00000455343 KCNA5P22460 613 aa4.4□□□□□ -1.71
RBM39-220ENST00000455343 RARSP54136 660 aaKnown RBP4.4□□□□□ -1.71
RBM39-220ENST00000455343 ZNF445P59923 1031 aa4.4□□□□□ -1.71
RBM39-220ENST00000455343 PSMC6P62333 389 aa4.4□□□□□ -1.71
RBM39-220ENST00000455343 ATP8B2P98198 1209 aa4.4□□□□□ -1.71
RBM39-220ENST00000455343 CNTN2Q02246 1040 aa4.4□□□□□ -1.71
RBM39-220ENST00000455343 KLRC3Q07444 240 aa4.4□□□□□ -1.71
RBM39-220ENST00000455343 ZNF394Q53GI3 561 aa4.4□□□□□ -1.71
RBM39-220ENST00000455343 ANKRD39Q53RE8 183 aa4.4□□□□□ -1.71
RBM39-220ENST00000455343 AXDND1Q5T1B0 1012 aaPredicted RBP4.4□□□□□ -1.71
RBM39-220ENST00000455343 SLC9C2Q5TAH2 1124 aa4.4□□□□□ -1.71
RBM39-220ENST00000455343 IQSEC1Q6DN90 963 aa4.4□□□□□ -1.71
RBM39-220ENST00000455343 CNKSR3Q6P9H4 555 aa4.4□□□□□ -1.71
RBM39-220ENST00000455343 CYP2R1Q6VVX0 501 aa4.4□□□□□ -1.71
RBM39-220ENST00000455343 C16orf86Q6ZW13 317 aa4.4□□□□□ -1.71
RBM39-220ENST00000455343 DEFB128Q7Z7B8 93 aa4.4□□□□□ -1.71
RBM39-220ENST00000455343 ANKRD35Q8N283 1001 aa4.4□□□□□ -1.71
RBM39-220ENST00000455343 LCORLQ8N3X6 602 aa4.4□□□□□ -1.71
RBM39-220ENST00000455343 RBBP8NLQ8NC74 664 aaPredicted RBP4.4□□□□□ -1.71
RBM39-220ENST00000455343 MORC4Q8TE76 937 aa4.4□□□□□ -1.71
RBM39-220ENST00000455343 MKL1Q969V6 931 aa4.4□□□□□ -1.71
RBM39-220ENST00000455343 FERD3LQ96RJ6 166 aa4.4□□□□□ -1.71
RBM39-220ENST00000455343 UIMC1Q96RL1 719 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms