RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 ZSCAN31Q96LW9 406 aaPredicted RBP17.69■□□□□ 0.42
GPC1-206ENST00000455111 PNMA5Q96PV4 448 aa17.69■□□□□ 0.42
GPC1-206ENST00000455111 PRRX2Q99811 253 aa17.69■□□□□ 0.42
GPC1-206ENST00000455111 RPP25Q9BUL9 199 aaKnown RBP17.69■□□□□ 0.42
GPC1-206ENST00000455111 PRKD2Q9BZL6 878 aa17.69■□□□□ 0.42
GPC1-206ENST00000455111 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.69■□□□□ 0.42
GPC1-206ENST00000455111 CITO14578 2027 aa17.69■□□□□ 0.42
GPC1-206ENST00000455111 ZMYND10O75800 440 aa17.68■□□□□ 0.42
GPC1-206ENST00000455111 C1RP00736 705 aa17.68■□□□□ 0.42
GPC1-206ENST00000455111 THP07101 528 aa17.68■□□□□ 0.42
GPC1-206ENST00000455111 CLCNKBP51801 687 aa17.68■□□□□ 0.42
GPC1-206ENST00000455111 XKR4Q5GH76 650 aa17.68■□□□□ 0.42
GPC1-206ENST00000455111 ALKAL1Q6UXT8 129 aa17.68■□□□□ 0.42
GPC1-206ENST00000455111 SLC44A3Q8N4M1 653 aa17.68■□□□□ 0.42
GPC1-206ENST00000455111 SNX29Q8TEQ0 813 aa17.68■□□□□ 0.42
GPC1-206ENST00000455111 ZMAT2Q96NC0 199 aaKnown RBP17.68■□□□□ 0.42
GPC1-206ENST00000455111 CDT1Q9H211 546 aa17.68■□□□□ 0.42
GPC1-206ENST00000455111 PLEKHA4Q9H4M7 779 aa17.68■□□□□ 0.42
GPC1-206ENST00000455111 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.68■□□□□ 0.42
GPC1-206ENST00000455111 SF3B1O75533 1304 aaKnown RBP eCLIP17.68■□□□□ 0.42
GPC1-206ENST00000455111 SPDYE4A6NLX3 237 aa17.67■□□□□ 0.42
GPC1-206ENST00000455111 I3L4J1 428 aa17.67■□□□□ 0.42
GPC1-206ENST00000455111 HIP1RO75146 1068 aa17.67■□□□□ 0.42
GPC1-206ENST00000455111 FGFR3P22607 806 aa17.67■□□□□ 0.42
GPC1-206ENST00000455111 GBP2P32456 591 aaPredicted RBP17.67■□□□□ 0.42
GPC1-206ENST00000455111 NPTX2P47972 431 aa17.67■□□□□ 0.42
GPC1-206ENST00000455111 PDIA5Q14554 519 aa17.67■□□□□ 0.42
GPC1-206ENST00000455111 PSMD5Q16401 504 aa17.67■□□□□ 0.42
GPC1-206ENST00000455111 ATF7IP2Q5U623 682 aa17.67■□□□□ 0.42
GPC1-206ENST00000455111 HAUS3Q68CZ6 603 aa17.67■□□□□ 0.42
GPC1-206ENST00000455111 RINT1Q6NUQ1 792 aa17.67■□□□□ 0.42
GPC1-206ENST00000455111 CYP26C1Q6V0L0 522 aa17.67■□□□□ 0.42
GPC1-206ENST00000455111 C1orf186Q6ZWK4 172 aa17.67■□□□□ 0.42
GPC1-206ENST00000455111 ACO2Q99798 780 aaKnown RBP17.67■□□□□ 0.42
GPC1-206ENST00000455111 TTPALQ9BTX7 342 aa17.67■□□□□ 0.42
GPC1-206ENST00000455111 SH2B1Q9NRF2 756 aaPredicted RBP17.67■□□□□ 0.42
GPC1-206ENST00000455111 ZDHHC7Q9NXF8 308 aa17.67■□□□□ 0.42
GPC1-206ENST00000455111 ARHGAP28Q9P2N2 729 aa17.67■□□□□ 0.42
GPC1-206ENST00000455111 TNFSF13BQ9Y275 285 aa17.67■□□□□ 0.42
GPC1-206ENST00000455111 CFAP54Q96N23 3096 aa17.67■□□□□ 0.42
GPC1-206ENST00000455111 ANHXE9PGG2 379 aa17.66■□□□□ 0.42
GPC1-206ENST00000455111 TMEM189-UBE2V1I3L0A0 370 aa17.66■□□□□ 0.42
GPC1-206ENST00000455111 NR1I2O75469 434 aa17.66■□□□□ 0.42
GPC1-206ENST00000455111 CFHP08603 1231 aa17.66■□□□□ 0.42
GPC1-206ENST00000455111 LAMP2P13473 410 aa17.66■□□□□ 0.42
GPC1-206ENST00000455111 AOC1P19801 751 aa17.66■□□□□ 0.42
GPC1-206ENST00000455111 PROZP22891 400 aa17.66■□□□□ 0.42
GPC1-206ENST00000455111 BRCC3P46736 316 aa17.66■□□□□ 0.42
GPC1-206ENST00000455111 CLCN5P51795 746 aa17.66■□□□□ 0.42
GPC1-206ENST00000455111 PEX3P56589 373 aa17.66■□□□□ 0.42
GPC1-206ENST00000455111 HTR4Q13639 388 aa17.66■□□□□ 0.42
GPC1-206ENST00000455111 GET4Q7L5D6 327 aaPredicted RBP17.66■□□□□ 0.42
GPC1-206ENST00000455111 ASCL5Q7RTU5 278 aa17.66■□□□□ 0.42
GPC1-206ENST00000455111 CEP57Q86XR8 500 aa17.66■□□□□ 0.42
GPC1-206ENST00000455111 FLCNQ8NFG4 579 aa17.66■□□□□ 0.42
GPC1-206ENST00000455111 ATOH1Q92858 354 aaPredicted RBP17.66■□□□□ 0.42
GPC1-206ENST00000455111 ZBTB45Q96K62 511 aaPredicted RBP17.66■□□□□ 0.42
GPC1-206ENST00000455111 IGSF9Q9P2J2 1179 aa17.66■□□□□ 0.42
GPC1-206ENST00000455111 CACNA1HO95180 2353 aa17.66■□□□□ 0.42
GPC1-206ENST00000455111 SMIM28A0A1B0GU29 152 aa17.65■□□□□ 0.42
GPC1-206ENST00000455111 SFI1A8K8P3 1242 aa17.65■□□□□ 0.42
GPC1-206ENST00000455111 PROB1E7EW31 1015 aa17.65■□□□□ 0.42
GPC1-206ENST00000455111 NRG2O14511 850 aaPredicted RBP17.65■□□□□ 0.42
GPC1-206ENST00000455111 TKTP29401 623 aaKnown RBP17.65■□□□□ 0.42
GPC1-206ENST00000455111 NUBP1P53384 320 aa17.65■□□□□ 0.42
GPC1-206ENST00000455111 UPP1Q16831 310 aa17.65■□□□□ 0.42
GPC1-206ENST00000455111 DCAF4L1Q3SXM0 396 aa17.65■□□□□ 0.42
GPC1-206ENST00000455111 GRASPQ7Z6J2 395 aaPredicted RBP17.65■□□□□ 0.42
GPC1-206ENST00000455111 SIX5Q8N196 739 aa17.65■□□□□ 0.42
GPC1-206ENST00000455111 FAM184AQ8NB25 1140 aa17.65■□□□□ 0.42
GPC1-206ENST00000455111 KIFAP3Q92845 792 aa17.65■□□□□ 0.42
GPC1-206ENST00000455111 DDX27Q96GQ7 796 aaKnown RBP17.65■□□□□ 0.42
GPC1-206ENST00000455111 TARS2Q9BW92 718 aaKnown RBP17.65■□□□□ 0.42
GPC1-206ENST00000455111 HAPLN2Q9GZV7 340 aa17.65■□□□□ 0.42
GPC1-206ENST00000455111 HCFC1R1Q9NWW0 138 aa17.65■□□□□ 0.42
GPC1-206ENST00000455111 MTRRQ9UBK8 725 aa17.65■□□□□ 0.42
GPC1-206ENST00000455111 PHLPP2Q6ZVD8 1323 aa17.65■□□□□ 0.42
GPC1-206ENST00000455111 COL4A2P08572 1712 aa17.64■□□□□ 0.41
GPC1-206ENST00000455111 GRM5P41594 1212 aa17.64■□□□□ 0.41
GPC1-206ENST00000455111 OSTNP61366 133 aa17.64■□□□□ 0.41
GPC1-206ENST00000455111 PPP2R5AQ15172 486 aa17.64■□□□□ 0.41
GPC1-206ENST00000455111 HYIQ5T013 277 aa17.64■□□□□ 0.41
GPC1-206ENST00000455111 ITFG1Q8TB96 612 aa17.64■□□□□ 0.41
GPC1-206ENST00000455111 FGF14Q92915 247 aa17.64■□□□□ 0.41
GPC1-206ENST00000455111 ADPGKQ9BRR6 497 aa17.64■□□□□ 0.41
GPC1-206ENST00000455111 TMEM134Q9H6X4 195 aa17.64■□□□□ 0.41
GPC1-206ENST00000455111 NOL7Q9UMY1 257 aaKnown RBP17.64■□□□□ 0.41
GPC1-206ENST00000455111 NUMBLQ9Y6R0 609 aa17.64■□□□□ 0.41
GPC1-206ENST00000455111 ANK1P16157 1881 aa17.63■□□□□ 0.41
GPC1-206ENST00000455111 K7ERI5 159 aa17.63■□□□□ 0.41
GPC1-206ENST00000455111 CCL16O15467 120 aa17.63■□□□□ 0.41
GPC1-206ENST00000455111 GFRA3O60609 400 aa17.63■□□□□ 0.41
GPC1-206ENST00000455111 C8AP07357 584 aa17.63■□□□□ 0.41
GPC1-206ENST00000455111 OR1D2P34982 312 aa17.63■□□□□ 0.41
GPC1-206ENST00000455111 PRPHP41219 470 aa17.63■□□□□ 0.41
GPC1-206ENST00000455111 NBL1P41271 181 aa17.63■□□□□ 0.41
GPC1-206ENST00000455111 EFNA5P52803 228 aa17.63■□□□□ 0.41
GPC1-206ENST00000455111 ATP2C1P98194 919 aaPredicted RBP17.63■□□□□ 0.41
GPC1-206ENST00000455111 RAB33AQ14088 237 aa17.63■□□□□ 0.41
GPC1-206ENST00000455111 SEZ6Q53EL9 994 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms