RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 TDRD10Q5VZ19 366 aaKnown RBP14.68□□□□□ -0.06
CLK3-203ENST00000454830 SCARA5Q6ZMJ2 495 aa14.68□□□□□ -0.06
CLK3-203ENST00000454830 FAM71AQ8IYT1 594 aa14.68□□□□□ -0.06
CLK3-203ENST00000454830 OR5B17Q8NGF7 314 aa14.68□□□□□ -0.06
CLK3-203ENST00000454830 HELQQ8TDG4 1101 aa14.68□□□□□ -0.06
CLK3-203ENST00000454830 BTBD6Q96KE9 485 aa14.68□□□□□ -0.06
CLK3-203ENST00000454830 MAF1Q9H063 256 aa14.68□□□□□ -0.06
CLK3-203ENST00000454830 RNPEPQ9H4A4 650 aa14.68□□□□□ -0.06
CLK3-203ENST00000454830 EPB41L5Q9HCM4 733 aa14.68□□□□□ -0.06
CLK3-203ENST00000454830 INTUQ9ULD6 942 aa14.68□□□□□ -0.06
CLK3-203ENST00000454830 IGKV6D-21A0A0A0MT36 114 aa14.68□□□□□ -0.06
CLK3-203ENST00000454830 EDN1P05305 212 aa14.68□□□□□ -0.06
CLK3-203ENST00000454830 TFDP1Q14186 410 aa14.68□□□□□ -0.06
CLK3-203ENST00000454830 BRI3BPQ8WY22 251 aa14.68□□□□□ -0.06
CLK3-203ENST00000454830 SHC3Q92529 594 aa14.68□□□□□ -0.06
CLK3-203ENST00000454830 HAPLN2Q9GZV7 340 aa14.68□□□□□ -0.06
CLK3-203ENST00000454830 ERAP1Q9NZ08 941 aa14.68□□□□□ -0.06
CLK3-203ENST00000454830 PGRMC1O00264 195 aaKnown RBP14.67□□□□□ -0.06
CLK3-203ENST00000454830 PSMD6Q15008 389 aa14.67□□□□□ -0.06
CLK3-203ENST00000454830 MMGT1Q8N4V1 131 aa14.67□□□□□ -0.06
CLK3-203ENST00000454830 STIM2Q9P246 746 aa14.67□□□□□ -0.06
CLK3-203ENST00000454830 RNF14Q9UBS8 474 aa14.67□□□□□ -0.06
CLK3-203ENST00000454830 ZSCAN5CA6NGD5 496 aaPredicted RBP14.67□□□□□ -0.06
CLK3-203ENST00000454830 HBP1O60381 514 aa14.67□□□□□ -0.06
CLK3-203ENST00000454830 RTN2O75298 545 aa14.67□□□□□ -0.06
CLK3-203ENST00000454830 TMEM191BP0C7N4 346 aa14.67□□□□□ -0.06
CLK3-203ENST00000454830 MYBL2P10244 700 aa14.67□□□□□ -0.06
CLK3-203ENST00000454830 INSRRP14616 1297 aa14.67□□□□□ -0.06
CLK3-203ENST00000454830 TARBP2Q15633 366 aaKnown RBP14.67□□□□□ -0.06
CLK3-203ENST00000454830 CPA5Q8WXQ8 436 aa14.67□□□□□ -0.06
CLK3-203ENST00000454830 PBKQ96KB5 322 aa14.67□□□□□ -0.06
CLK3-203ENST00000454830 JPH2Q9BR39 696 aaPredicted RBP14.67□□□□□ -0.06
CLK3-203ENST00000454830 DDX47Q9H0S4 455 aaKnown RBP14.67□□□□□ -0.06
CLK3-203ENST00000454830 NOC2LQ9Y3T9 749 aaKnown RBP14.67□□□□□ -0.06
CLK3-203ENST00000454830 B4GALT5O43286 388 aa14.67□□□□□ -0.06
CLK3-203ENST00000454830 FGGP02679 453 aa14.67□□□□□ -0.06
CLK3-203ENST00000454830 GTF2H1P32780 548 aa14.67□□□□□ -0.06
CLK3-203ENST00000454830 GYS2P54840 703 aa14.67□□□□□ -0.06
CLK3-203ENST00000454830 NCOA4Q13772 614 aa14.67□□□□□ -0.06
CLK3-203ENST00000454830 RHOT2Q8IXI1 618 aa14.67□□□□□ -0.06
CLK3-203ENST00000454830 TRIM31Q9BZY9 425 aa14.67□□□□□ -0.06
CLK3-203ENST00000454830 MTMR12Q9C0I1 747 aa14.67□□□□□ -0.06
CLK3-203ENST00000454830 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.67□□□□□ -0.06
CLK3-203ENST00000454830 L1RE1Q9UN81 338 aa14.67□□□□□ -0.06
CLK3-203ENST00000454830 PTPRJQ12913 1337 aa14.66□□□□□ -0.06
CLK3-203ENST00000454830 DNAJC25-GNG10A0A024R161 153 aa14.66□□□□□ -0.06
CLK3-203ENST00000454830 ATP8B1O43520 1251 aa14.66□□□□□ -0.06
CLK3-203ENST00000454830 TOM1L1O75674 476 aa14.66□□□□□ -0.06
CLK3-203ENST00000454830 GH1P01241 217 aa14.66□□□□□ -0.06
CLK3-203ENST00000454830 GJC1P36383 396 aa14.66□□□□□ -0.06
CLK3-203ENST00000454830 WDR93Q6P2C0 686 aa14.66□□□□□ -0.06
CLK3-203ENST00000454830 LRRC57Q8N9N7 239 aa14.66□□□□□ -0.06
CLK3-203ENST00000454830 AFAP1L1Q8TED9 768 aa14.66□□□□□ -0.06
CLK3-203ENST00000454830 NUP85Q9BW27 656 aa14.66□□□□□ -0.06
CLK3-203ENST00000454830 NXF1Q9UBU9 619 aaKnown RBP14.66□□□□□ -0.06
CLK3-203ENST00000454830 CPA4Q9UI42 421 aa14.66□□□□□ -0.06
CLK3-203ENST00000454830 DAAM1Q9Y4D1 1078 aa14.66□□□□□ -0.06
CLK3-203ENST00000454830 A0A0B4J269 797 aa14.66□□□□□ -0.06
CLK3-203ENST00000454830 VTNP04004 478 aa14.66□□□□□ -0.06
CLK3-203ENST00000454830 GUCY2FP51841 1108 aa14.66□□□□□ -0.06
CLK3-203ENST00000454830 NOP14P78316 857 aaKnown RBP14.66□□□□□ -0.06
CLK3-203ENST00000454830 NT5DC3Q86UY8 548 aa14.66□□□□□ -0.06
CLK3-203ENST00000454830 GOLGA6L1Q8N7Z2 621 aa14.66□□□□□ -0.06
CLK3-203ENST00000454830 CEP120Q8N960 986 aa14.66□□□□□ -0.06
CLK3-203ENST00000454830 CNOT8Q9UFF9 292 aaKnown RBP14.66□□□□□ -0.06
CLK3-203ENST00000454830 TARSL2A2RTX5 802 aaKnown RBP14.65□□□□□ -0.06
CLK3-203ENST00000454830 THAP12O43422 761 aa14.65□□□□□ -0.06
CLK3-203ENST00000454830 FMO1Q01740 532 aa14.65□□□□□ -0.06
CLK3-203ENST00000454830 ZACNQ401N2 412 aa14.65□□□□□ -0.06
CLK3-203ENST00000454830 CCNI2Q6ZMN8 369 aaPredicted RBP14.65□□□□□ -0.06
CLK3-203ENST00000454830 USP38Q8NB14 1042 aa14.65□□□□□ -0.06
CLK3-203ENST00000454830 HNRNPLLQ8WVV9 542 aaKnown RBP14.65□□□□□ -0.06
CLK3-203ENST00000454830 NLRP7Q8WX94 980 aa14.65□□□□□ -0.06
CLK3-203ENST00000454830 RUFY1Q96T51 708 aa14.65□□□□□ -0.06
CLK3-203ENST00000454830 COG5Q9UP83 839 aa14.65□□□□□ -0.06
CLK3-203ENST00000454830 ALG6Q9Y672 507 aa14.65□□□□□ -0.06
CLK3-203ENST00000454830 PTPRFP10586 1907 aa14.65□□□□□ -0.06
CLK3-203ENST00000454830 A0A0A6YYK5 440 aaPredicted RBP14.65□□□□□ -0.06
CLK3-203ENST00000454830 BTNL10A8MVZ5 291 aa14.65□□□□□ -0.06
CLK3-203ENST00000454830 LGALS2P05162 132 aa14.65□□□□□ -0.06
CLK3-203ENST00000454830 HUNKP57058 714 aa14.65□□□□□ -0.06
CLK3-203ENST00000454830 CDR2Q01850 454 aa14.65□□□□□ -0.06
CLK3-203ENST00000454830 LAMC2Q13753 1193 aa14.65□□□□□ -0.06
CLK3-203ENST00000454830 ATF7IP2Q5U623 682 aa14.65□□□□□ -0.06
CLK3-203ENST00000454830 IFT20Q8IY31 132 aa14.65□□□□□ -0.06
CLK3-203ENST00000454830 ZNF564Q8TBZ8 553 aaPredicted RBP14.65□□□□□ -0.06
CLK3-203ENST00000454830 FAM49AQ9H0Q0 323 aaPredicted RBP14.65□□□□□ -0.06
CLK3-203ENST00000454830 VPS18Q9P253 973 aa14.65□□□□□ -0.06
CLK3-203ENST00000454830 COQ4Q9Y3A0 265 aa14.65□□□□□ -0.06
CLK3-203ENST00000454830 KIAA0391O15091 583 aaKnown RBP14.65□□□□□ -0.06
CLK3-203ENST00000454830 CHRNB2P17787 502 aa14.65□□□□□ -0.06
CLK3-203ENST00000454830 NSFP46459 744 aaKnown RBP14.65□□□□□ -0.06
CLK3-203ENST00000454830 TMEM62Q0P6H9 643 aa14.65□□□□□ -0.06
CLK3-203ENST00000454830 CCDC62Q6P9F0 684 aa14.65□□□□□ -0.06
CLK3-203ENST00000454830 CRELD2Q6UXH1 353 aaPredicted RBP14.65□□□□□ -0.06
CLK3-203ENST00000454830 DPH6Q7L8W6 267 aa14.65□□□□□ -0.06
CLK3-203ENST00000454830 PLPPR4Q7Z2D5 763 aa14.65□□□□□ -0.06
CLK3-203ENST00000454830 C2orf40Q9H1Z8 148 aa14.65□□□□□ -0.06
CLK3-203ENST00000454830 TMEM134Q9H6X4 195 aa14.65□□□□□ -0.06
CLK3-203ENST00000454830 NFU1Q9UMS0 254 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms