RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 COL6A3P12111 3177 aa11.37□□□□□ -0.59
GTF3C2-206ENST00000454704 ZNFX1Q9P2E3 1918 aaKnown RBP11.37□□□□□ -0.59
GTF3C2-206ENST00000454704 C5orf60A6NFR6 353 aa11.36□□□□□ -0.59
GTF3C2-206ENST00000454704 CHMP2AO43633 222 aa11.36□□□□□ -0.59
GTF3C2-206ENST00000454704 ZC3H11AO75152 810 aaKnown RBP eCLIP11.36□□□□□ -0.59
GTF3C2-206ENST00000454704 CAP2P40123 477 aa11.36□□□□□ -0.59
GTF3C2-206ENST00000454704 FNTAP49354 379 aa11.36□□□□□ -0.59
GTF3C2-206ENST00000454704 MXI1P50539 228 aa11.36□□□□□ -0.59
GTF3C2-206ENST00000454704 KCNA1Q09470 495 aa11.36□□□□□ -0.59
GTF3C2-206ENST00000454704 MTMR2Q13614 643 aa11.36□□□□□ -0.59
GTF3C2-206ENST00000454704 BYSLQ13895 437 aaKnown RBP11.36□□□□□ -0.59
GTF3C2-206ENST00000454704 SLMAPQ14BN4 828 aa11.36□□□□□ -0.59
GTF3C2-206ENST00000454704 UAP1Q16222 522 aaPredicted RBP11.36□□□□□ -0.59
GTF3C2-206ENST00000454704 ZC2HC1CQ53FD0 456 aaPredicted RBP11.36□□□□□ -0.59
GTF3C2-206ENST00000454704 NAA35Q5VZE5 725 aa11.36□□□□□ -0.59
GTF3C2-206ENST00000454704 SYDE1Q6ZW31 735 aaPredicted RBP11.36□□□□□ -0.59
GTF3C2-206ENST00000454704 CYFIP1Q7L576 1253 aa11.36□□□□□ -0.59
GTF3C2-206ENST00000454704 NECAB2Q7Z6G3 386 aa11.36□□□□□ -0.59
GTF3C2-206ENST00000454704 C7orf61Q8IZ16 206 aa11.36□□□□□ -0.59
GTF3C2-206ENST00000454704 C12orf50Q8NA57 414 aaPredicted RBP11.36□□□□□ -0.59
GTF3C2-206ENST00000454704 MYCBPAPQ8TBZ2 947 aa11.36□□□□□ -0.59
GTF3C2-206ENST00000454704 TMC2Q8TDI7 906 aa11.36□□□□□ -0.59
GTF3C2-206ENST00000454704 ZNF473Q8WTR7 871 aaKnown RBP11.36□□□□□ -0.59
GTF3C2-206ENST00000454704 UBLCP1Q8WVY7 318 aaPredicted RBP11.36□□□□□ -0.59
GTF3C2-206ENST00000454704 KIFAP3Q92845 792 aa11.36□□□□□ -0.59
GTF3C2-206ENST00000454704 KCNN1Q92952 543 aa11.36□□□□□ -0.59
GTF3C2-206ENST00000454704 SLCO2A1Q92959 643 aa11.36□□□□□ -0.59
GTF3C2-206ENST00000454704 TRIM11Q96F44 468 aa11.36□□□□□ -0.59
GTF3C2-206ENST00000454704 LRCH3Q96II8 777 aa11.36□□□□□ -0.59
GTF3C2-206ENST00000454704 TRERF1Q96PN7 1200 aa11.36□□□□□ -0.59
GTF3C2-206ENST00000454704 ZSWIM1Q9BR11 485 aa11.36□□□□□ -0.59
GTF3C2-206ENST00000454704 AP1M1Q9BXS5 423 aa11.36□□□□□ -0.59
GTF3C2-206ENST00000454704 AMACRQ9UHK6 382 aa11.36□□□□□ -0.59
GTF3C2-206ENST00000454704 SLC12A6Q9UHW9 1150 aa11.36□□□□□ -0.59
GTF3C2-206ENST00000454704 GTF3C4Q9UKN8 822 aa11.36□□□□□ -0.59
GTF3C2-206ENST00000454704 COQ4Q9Y3A0 265 aa11.36□□□□□ -0.59
GTF3C2-206ENST00000454704 EMSYQ7Z589 1322 aa11.36□□□□□ -0.59
GTF3C2-206ENST00000454704 A0A1W2PPC1 479 aa11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 GMNCA6NCL1 334 aa11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 KIAA0391O15091 583 aaKnown RBP11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 TTI1O43156 1089 aa11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 DAPK3O43293 454 aa11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 PEX10O60683 326 aa11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 VCAM1P19320 739 aa11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 RARRES1P49788 294 aa11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 SMTNP53814 917 aa11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 SNAP25P60880 206 aa11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 KRT76Q01546 638 aa11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 ADCY2Q08462 1091 aa11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 SHROOM1Q2M3G4 852 aaPredicted RBP11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 KIAA1755Q5JYT7 1200 aa11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 GJB7Q6PEY0 223 aa11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 CEP128Q6ZU80 1094 aa11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 ZNF677Q86XU0 584 aa11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 GPIHBP1Q8IV16 184 aa11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 FAM71AQ8IYT1 594 aa11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 DAW1Q8N136 415 aa11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 OTUD6BQ8N6M0 293 aa11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 PRPF38AQ8NAV1 312 aaKnown RBP11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 TLCD1Q96CP7 247 aa11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 PABPC3Q9H361 631 aaKnown RBP11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 AS3MTQ9HBK9 375 aa11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 GJD2Q9UKL4 321 aa11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 SIP14410 1827 aa11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 SFI1A8K8P3 1242 aa11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 MYO1FO00160 1098 aa11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 MAFGO15525 162 aa11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 TRAPPC3O43617 180 aa11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 CYP1A2P05177 515 aa11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 ARP10275 920 aa11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 ALAS1P13196 640 aa11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 GPC3P51654 580 aa11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 RTP1P59025 263 aa11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 RNASE9P60153 205 aaKnown RBP11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 IRX3P78415 501 aaPredicted RBP11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 JAG1P78504 1218 aa11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 MRPS25P82663 173 aaKnown RBP11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 DHX9Q08211 1270 aaKnown RBP11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 IFFO1Q0D2I5 559 aa11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 SH3D19Q5HYK7 790 aa11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 KCTD16Q68DU8 428 aa11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 PHLDB3Q6NSJ2 640 aa11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 CCDC174Q6PII3 467 aa11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 MMS22LQ6ZRQ5 1243 aa11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 JAMLQ86YT9 394 aa11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 CNPY4Q8N129 248 aa11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 SH2D3CQ8N5H7 860 aa11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 SPIRE2Q8WWL2 714 aa11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 TRIB2Q92519 343 aa11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 SHC3Q92529 594 aa11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 CCT8L2Q96SF2 557 aa11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 SENP7Q9BQF6 1050 aa11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 ROPN1BQ9BZX4 212 aaPredicted RBP11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 THAP2Q9H0W7 228 aa11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 ROPN1Q9HAT0 212 aaPredicted RBP11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 AGO4Q9HCK5 861 aaKnown RBP11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 TMEM8AQ9HCN3 771 aa11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 UBE2TQ9NPD8 197 aaPredicted RBP11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 OSGEPQ9NPF4 335 aa11.35□□□□□ -0.59
GTF3C2-206ENST00000454704 ZDHHC18Q9NUE0 388 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms