RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 SLC16A3O15427 465 aaKnown RBP12.59□□□□□ -0.39
SCN9A-204ENST00000452182 DGKIO75912 1065 aa12.59□□□□□ -0.39
SCN9A-204ENST00000452182 AKAP3O75969 853 aa12.59□□□□□ -0.39
SCN9A-204ENST00000452182 RECQL4O94761 1208 aa12.59□□□□□ -0.39
SCN9A-204ENST00000452182 AKAP5P24588 427 aa12.59□□□□□ -0.39
SCN9A-204ENST00000452182 PSMC2P35998 433 aaKnown RBP12.59□□□□□ -0.39
SCN9A-204ENST00000452182 ZNF165P49910 485 aa12.59□□□□□ -0.39
SCN9A-204ENST00000452182 OSTNP61366 133 aa12.59□□□□□ -0.39
SCN9A-204ENST00000452182 MYL5Q02045 173 aa12.59□□□□□ -0.39
SCN9A-204ENST00000452182 SHHQ15465 462 aa12.59□□□□□ -0.39
SCN9A-204ENST00000452182 ENOX2Q16206 610 aaKnown RBP12.59□□□□□ -0.39
SCN9A-204ENST00000452182 SLC10A6Q3KNW5 377 aa12.59□□□□□ -0.39
SCN9A-204ENST00000452182 SEZ6Q53EL9 994 aa12.59□□□□□ -0.39
SCN9A-204ENST00000452182 C9orf50Q5SZB4 431 aa12.59□□□□□ -0.39
SCN9A-204ENST00000452182 CBWD2Q8IUF1 395 aa12.59□□□□□ -0.39
SCN9A-204ENST00000452182 BRSK2Q8IWQ3 736 aa12.59□□□□□ -0.39
SCN9A-204ENST00000452182 TMEM192Q8IY95 271 aa12.59□□□□□ -0.39
SCN9A-204ENST00000452182 ZSWIM2Q8NEG5 633 aa12.59□□□□□ -0.39
SCN9A-204ENST00000452182 NOC3LQ8WTT2 800 aaKnown RBP12.59□□□□□ -0.39
SCN9A-204ENST00000452182 MFSD14AQ96MC6 490 aa12.59□□□□□ -0.39
SCN9A-204ENST00000452182 PRO3102Q9H379 93 aa12.59□□□□□ -0.39
SCN9A-204ENST00000452182 ASB7Q9H672 318 aa12.59□□□□□ -0.39
SCN9A-204ENST00000452182 RPF1Q9H9Y2 349 aaKnown RBP12.59□□□□□ -0.39
SCN9A-204ENST00000452182 RSAD1Q9HA92 442 aa12.59□□□□□ -0.39
SCN9A-204ENST00000452182 RNF19AQ9NV58 838 aa12.59□□□□□ -0.39
SCN9A-204ENST00000452182 RBAKQ9NYW8 714 aaPredicted RBP12.59□□□□□ -0.39
SCN9A-204ENST00000452182 PARP2Q9UGN5 583 aa12.59□□□□□ -0.39
SCN9A-204ENST00000452182 PDCD11Q14690 1871 aaKnown RBP12.59□□□□□ -0.39
SCN9A-204ENST00000452182 FNDC1Q4ZHG4 1894 aaPredicted RBP12.59□□□□□ -0.39
SCN9A-204ENST00000452182 CEP290O15078 2479 aa12.59□□□□□ -0.39
SCN9A-204ENST00000452182 GOLGA8IPA6NC78 632 aa12.59□□□□□ -0.39
SCN9A-204ENST00000452182 GOLGA8JA6NMD2 632 aa12.59□□□□□ -0.39
SCN9A-204ENST00000452182 MEFVO15553 781 aaPredicted RBP12.59□□□□□ -0.39
SCN9A-204ENST00000452182 OFD1O75665 1012 aa12.59□□□□□ -0.39
SCN9A-204ENST00000452182 IL18RAPO95256 599 aa12.59□□□□□ -0.39
SCN9A-204ENST00000452182 GJB5O95377 273 aa12.59□□□□□ -0.39
SCN9A-204ENST00000452182 GNA14O95837 355 aa12.59□□□□□ -0.39
SCN9A-204ENST00000452182 CXCL8P10145 99 aa12.59□□□□□ -0.39
SCN9A-204ENST00000452182 CASP4P49662 377 aa12.59□□□□□ -0.39
SCN9A-204ENST00000452182 MARSP56192 900 aaKnown RBP12.59□□□□□ -0.39
SCN9A-204ENST00000452182 SURF1Q15526 300 aa12.59□□□□□ -0.39
SCN9A-204ENST00000452182 CLLU1OSQ5K130 101 aa12.59□□□□□ -0.39
SCN9A-204ENST00000452182 CEP135Q66GS9 1140 aa12.59□□□□□ -0.39
SCN9A-204ENST00000452182 GLB1LQ6UWU2 654 aa12.59□□□□□ -0.39
SCN9A-204ENST00000452182 RNF169Q8NCN4 708 aa12.59□□□□□ -0.39
SCN9A-204ENST00000452182 GSTCDQ8NEC7 633 aa12.59□□□□□ -0.39
SCN9A-204ENST00000452182 LPPQ93052 612 aa12.59□□□□□ -0.39
SCN9A-204ENST00000452182 ZNF689Q96CS4 500 aaPredicted RBP12.59□□□□□ -0.39
SCN9A-204ENST00000452182 SNX27Q96L92 541 aa12.59□□□□□ -0.39
SCN9A-204ENST00000452182 RNPC3Q96LT9 517 aaKnown RBP12.59□□□□□ -0.39
SCN9A-204ENST00000452182 APOL6Q9BWW8 343 aa12.59□□□□□ -0.39
SCN9A-204ENST00000452182 SRRTQ9BXP5 876 aaKnown RBP12.59□□□□□ -0.39
SCN9A-204ENST00000452182 TMEM117Q9H0C3 514 aa12.59□□□□□ -0.39
SCN9A-204ENST00000452182 RC3H2Q9HBD1 1191 aaKnown RBP12.59□□□□□ -0.39
SCN9A-204ENST00000452182 CNTN3Q9P232 1028 aa12.59□□□□□ -0.39
SCN9A-204ENST00000452182 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.59□□□□□ -0.39
SCN9A-204ENST00000452182 COL4A6Q14031 1691 aa12.58□□□□□ -0.39
SCN9A-204ENST00000452182 TRIP11Q15643 1979 aa12.58□□□□□ -0.4
SCN9A-204ENST00000452182 ARL5CA6NH57 179 aa12.58□□□□□ -0.4
SCN9A-204ENST00000452182 EPB41P11171 864 aaKnown RBP12.58□□□□□ -0.4
SCN9A-204ENST00000452182 KCNE1P15382 129 aa12.58□□□□□ -0.4
SCN9A-204ENST00000452182 ATP2A2P16615 1042 aaKnown RBP12.58□□□□□ -0.4
SCN9A-204ENST00000452182 HTRA4P83105 476 aaPredicted RBP12.58□□□□□ -0.4
SCN9A-204ENST00000452182 PPP2R3AQ06190 1150 aa12.58□□□□□ -0.4
SCN9A-204ENST00000452182 CYP24A1Q07973 514 aa12.58□□□□□ -0.4
SCN9A-204ENST00000452182 NCAPHQ15003 741 aa12.58□□□□□ -0.4
SCN9A-204ENST00000452182 INTS8Q75QN2 995 aaKnown RBP12.58□□□□□ -0.4
SCN9A-204ENST00000452182 NT5DC4Q86YG4 428 aa12.58□□□□□ -0.4
SCN9A-204ENST00000452182 HERC6Q8IVU3 1022 aa12.58□□□□□ -0.4
SCN9A-204ENST00000452182 RDH13Q8NBN7 331 aa12.58□□□□□ -0.4
SCN9A-204ENST00000452182 BORCS6Q96GS4 357 aa12.58□□□□□ -0.4
SCN9A-204ENST00000452182 GAD1Q99259 594 aa12.58□□□□□ -0.4
SCN9A-204ENST00000452182 TSPY26PQ9H489 355 aa12.58□□□□□ -0.4
SCN9A-204ENST00000452182 THAP9Q9H5L6 903 aa12.58□□□□□ -0.4
SCN9A-204ENST00000452182 METTL14Q9HCE5 456 aaKnown RBP12.58□□□□□ -0.4
SCN9A-204ENST00000452182 KANSL3Q9P2N6 904 aa12.58□□□□□ -0.4
SCN9A-204ENST00000452182 DERAQ9Y315 318 aa12.58□□□□□ -0.4
SCN9A-204ENST00000452182 C2CD2Q9Y426 696 aa12.58□□□□□ -0.4
SCN9A-204ENST00000452182 NFE2L3Q9Y4A8 694 aa12.58□□□□□ -0.4
SCN9A-204ENST00000452182 TDRD15B5MCY1 1934 aaKnown RBP12.58□□□□□ -0.4
SCN9A-204ENST00000452182 LACTBL1A8MY62 500 aa12.57□□□□□ -0.4
SCN9A-204ENST00000452182 UPP2O95045 317 aa12.57□□□□□ -0.4
SCN9A-204ENST00000452182 FGFR1P11362 822 aa12.57□□□□□ -0.4
SCN9A-204ENST00000452182 MLH1P40692 756 aa12.57□□□□□ -0.4
SCN9A-204ENST00000452182 CLDN10P78369 228 aa12.57□□□□□ -0.4
SCN9A-204ENST00000452182 PSMD6Q15008 389 aa12.57□□□□□ -0.4
SCN9A-204ENST00000452182 IQCB1Q15051 598 aa12.57□□□□□ -0.4
SCN9A-204ENST00000452182 TPD52L1Q16890 204 aaPredicted RBP12.57□□□□□ -0.4
SCN9A-204ENST00000452182 FRMD5Q7Z6J6 570 aa12.57□□□□□ -0.4
SCN9A-204ENST00000452182 USP37Q86T82 979 aa12.57□□□□□ -0.4
SCN9A-204ENST00000452182 FAM186BQ8IYM0 893 aa12.57□□□□□ -0.4
SCN9A-204ENST00000452182 TDHQ8IZJ6 230 aa12.57□□□□□ -0.4
SCN9A-204ENST00000452182 ABI1Q8IZP0 508 aa12.57□□□□□ -0.4
SCN9A-204ENST00000452182 FAM200AQ8TCP9 573 aa12.57□□□□□ -0.4
SCN9A-204ENST00000452182 TMC2Q8TDI7 906 aa12.57□□□□□ -0.4
SCN9A-204ENST00000452182 PARD3BQ8TEW8 1205 aa12.57□□□□□ -0.4
SCN9A-204ENST00000452182 EEF2KMTQ96G04 330 aa12.57□□□□□ -0.4
SCN9A-204ENST00000452182 ZFP42Q96MM3 310 aa12.57□□□□□ -0.4
SCN9A-204ENST00000452182 CASD1Q96PB1 797 aa12.57□□□□□ -0.4
SCN9A-204ENST00000452182 MRPL9Q9BYD2 267 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms