RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 CCDC195A0A1B0GUA6 201 aa23.73■■□□□ 1.39
C9orf3-208ENST00000451893 LILRB3O75022 631 aa23.73■■□□□ 1.39
C9orf3-208ENST00000451893 HARSP12081 509 aaKnown RBP23.73■■□□□ 1.39
C9orf3-208ENST00000451893 MATR3P43243 847 aaKnown RBP eCLIP23.73■■□□□ 1.39
C9orf3-208ENST00000451893 NPTX2P47972 431 aa23.73■■□□□ 1.39
C9orf3-208ENST00000451893 RAD51AP2Q09MP3 1159 aa23.73■■□□□ 1.39
C9orf3-208ENST00000451893 KIAA0319Q5VV43 1072 aa23.73■■□□□ 1.39
C9orf3-208ENST00000451893 RINT1Q6NUQ1 792 aa23.73■■□□□ 1.39
C9orf3-208ENST00000451893 STAMQ92783 540 aa23.73■■□□□ 1.39
C9orf3-208ENST00000451893 CALML4Q96GE6 196 aa23.73■■□□□ 1.39
C9orf3-208ENST00000451893 RUSC1Q9BVN2 902 aa23.73■■□□□ 1.39
C9orf3-208ENST00000451893 KCNH6Q9H252 994 aa23.73■■□□□ 1.39
C9orf3-208ENST00000451893 C17orf75Q9HAS0 396 aa23.73■■□□□ 1.39
C9orf3-208ENST00000451893 LMBRD1Q9NUN5 540 aa23.73■■□□□ 1.39
C9orf3-208ENST00000451893 TNFSF13BQ9Y275 285 aa23.73■■□□□ 1.39
C9orf3-208ENST00000451893 USTQ9Y2C2 406 aa23.73■■□□□ 1.39
C9orf3-208ENST00000451893 C2orf16Q68DN1 1984 aa23.72■■□□□ 1.39
C9orf3-208ENST00000451893 SPATA31D3P0C874 917 aa23.72■■□□□ 1.39
C9orf3-208ENST00000451893 OSTNP61366 133 aa23.72■■□□□ 1.39
C9orf3-208ENST00000451893 DNM1Q05193 864 aaKnown RBP23.72■■□□□ 1.39
C9orf3-208ENST00000451893 IL17AQ16552 155 aa23.72■■□□□ 1.39
C9orf3-208ENST00000451893 GLRA4Q5JXX5 417 aa23.72■■□□□ 1.39
C9orf3-208ENST00000451893 FAM171A1Q5VUB5 890 aa23.72■■□□□ 1.39
C9orf3-208ENST00000451893 ARL6IP4Q66PJ3 421 aaKnown RBP23.72■■□□□ 1.39
C9orf3-208ENST00000451893 SPATA31D4Q6ZUB0 917 aa23.72■■□□□ 1.39
C9orf3-208ENST00000451893 UBALD2Q8IYN6 164 aa23.72■■□□□ 1.39
C9orf3-208ENST00000451893 RNF168Q8IYW5 571 aaPredicted RBP23.72■■□□□ 1.39
C9orf3-208ENST00000451893 TTPALQ9BTX7 342 aa23.72■■□□□ 1.39
C9orf3-208ENST00000451893 TMEM134Q9H6X4 195 aa23.72■■□□□ 1.39
C9orf3-208ENST00000451893 RXFP1Q9HBX9 757 aa23.72■■□□□ 1.39
C9orf3-208ENST00000451893 LIMD1Q9UGP4 676 aa23.72■■□□□ 1.39
C9orf3-208ENST00000451893 MTCL1Q9Y4B5 1905 aaKnown RBP23.72■■□□□ 1.39
C9orf3-208ENST00000451893 TRIP11Q15643 1979 aa23.72■■□□□ 1.39
C9orf3-208ENST00000451893 PTGESO14684 152 aa23.71■■□□□ 1.39
C9orf3-208ENST00000451893 SLC16A4O15374 487 aa23.71■■□□□ 1.39
C9orf3-208ENST00000451893 PRPF40AO75400 957 aaKnown RBP23.71■■□□□ 1.39
C9orf3-208ENST00000451893 KIF4AO95239 1232 aa23.71■■□□□ 1.39
C9orf3-208ENST00000451893 BMP15O95972 392 aa23.71■■□□□ 1.39
C9orf3-208ENST00000451893 GBP2P32456 591 aaPredicted RBP23.71■■□□□ 1.39
C9orf3-208ENST00000451893 NT5DC1Q5TFE4 455 aa23.71■■□□□ 1.39
C9orf3-208ENST00000451893 PDXDC1Q6P996 788 aa23.71■■□□□ 1.39
C9orf3-208ENST00000451893 BMP8AQ7Z5Y6 402 aa23.71■■□□□ 1.39
C9orf3-208ENST00000451893 ZDHHC14Q8IZN3 488 aa23.71■■□□□ 1.39
C9orf3-208ENST00000451893 KCTD17Q8N5Z5 321 aa23.71■■□□□ 1.39
C9orf3-208ENST00000451893 SMG7Q92540 1137 aaKnown RBP23.71■■□□□ 1.39
C9orf3-208ENST00000451893 PAAF1Q9BRP4 392 aa23.71■■□□□ 1.39
C9orf3-208ENST00000451893 PLEKHA4Q9H4M7 779 aa23.71■■□□□ 1.39
C9orf3-208ENST00000451893 CHST7Q9NS84 486 aa23.71■■□□□ 1.39
C9orf3-208ENST00000451893 SFI1A8K8P3 1242 aa23.7■■□□□ 1.38
C9orf3-208ENST00000451893 TRAK2O60296 914 aa23.7■■□□□ 1.38
C9orf3-208ENST00000451893 EDN1P05305 212 aa23.7■■□□□ 1.38
C9orf3-208ENST00000451893 ASGR2P07307 311 aa23.7■■□□□ 1.38
C9orf3-208ENST00000451893 RPL17P18621 184 aaKnown RBP23.7■■□□□ 1.38
C9orf3-208ENST00000451893 UBA7P41226 1012 aa23.7■■□□□ 1.38
C9orf3-208ENST00000451893 LIN9Q5TKA1 542 aa23.7■■□□□ 1.38
C9orf3-208ENST00000451893 PRSS55Q6UWB4 352 aaPredicted RBP23.7■■□□□ 1.38
C9orf3-208ENST00000451893 FBXL6Q8N531 539 aa23.7■■□□□ 1.38
C9orf3-208ENST00000451893 FNIP2Q9P278 1114 aa23.7■■□□□ 1.38
C9orf3-208ENST00000451893 DENND4AQ7Z401 1863 aa23.7■■□□□ 1.38
C9orf3-208ENST00000451893 CITO14578 2027 aa23.69■■□□□ 1.38
C9orf3-208ENST00000451893 TGM5O43548 720 aa23.69■■□□□ 1.38
C9orf3-208ENST00000451893 B3GAT3O94766 335 aa23.69■■□□□ 1.38
C9orf3-208ENST00000451893 MBD3O95983 291 aa23.69■■□□□ 1.38
C9orf3-208ENST00000451893 KRT18P05783 430 aaKnown RBP23.69■■□□□ 1.38
C9orf3-208ENST00000451893 PLA2G4BP0C869 781 aa23.69■■□□□ 1.38
C9orf3-208ENST00000451893 PSMD5Q16401 504 aa23.69■■□□□ 1.38
C9orf3-208ENST00000451893 CYP26C1Q6V0L0 522 aa23.69■■□□□ 1.38
C9orf3-208ENST00000451893 C1orf186Q6ZWK4 172 aa23.69■■□□□ 1.38
C9orf3-208ENST00000451893 KCNK18Q7Z418 384 aa23.69■■□□□ 1.38
C9orf3-208ENST00000451893 GPR65Q8IYL9 337 aa23.69■■□□□ 1.38
C9orf3-208ENST00000451893 CMASQ8NFW8 434 aaPredicted RBP23.69■■□□□ 1.38
C9orf3-208ENST00000451893 HDAC7Q8WUI4 952 aa23.69■■□□□ 1.38
C9orf3-208ENST00000451893 BICD1Q96G01 975 aa23.69■■□□□ 1.38
C9orf3-208ENST00000451893 AK8Q96MA6 479 aa23.69■■□□□ 1.38
C9orf3-208ENST00000451893 UROC1Q96N76 676 aa23.69■■□□□ 1.38
C9orf3-208ENST00000451893 ACO2Q99798 780 aaKnown RBP23.69■■□□□ 1.38
C9orf3-208ENST00000451893 MMTAG2Q9BU76 263 aaKnown RBP23.69■■□□□ 1.38
C9orf3-208ENST00000451893 TARS2Q9BW92 718 aaKnown RBP23.69■■□□□ 1.38
C9orf3-208ENST00000451893 MFSD1Q9H3U5 465 aa23.69■■□□□ 1.38
C9orf3-208ENST00000451893 ANKFY1Q9P2R3 1169 aa23.69■■□□□ 1.38
C9orf3-208ENST00000451893 TRAPPC3O43617 180 aa23.68■■□□□ 1.38
C9orf3-208ENST00000451893 RFPL2O75678 378 aa23.68■■□□□ 1.38
C9orf3-208ENST00000451893 GUCY2CP25092 1073 aa23.68■■□□□ 1.38
C9orf3-208ENST00000451893 GRM5P41594 1212 aa23.68■■□□□ 1.38
C9orf3-208ENST00000451893 FOXD4L6Q3SYB3 417 aaPredicted RBP23.68■■□□□ 1.38
C9orf3-208ENST00000451893 RTP2Q5QGT7 225 aa23.68■■□□□ 1.38
C9orf3-208ENST00000451893 FOXD4L3Q6VB84 417 aaPredicted RBP23.68■■□□□ 1.38
C9orf3-208ENST00000451893 SYT2Q8N9I0 419 aaPredicted RBP23.68■■□□□ 1.38
C9orf3-208ENST00000451893 ACAP3Q96P50 834 aa23.68■■□□□ 1.38
C9orf3-208ENST00000451893 PRRX2Q99811 253 aa23.68■■□□□ 1.38
C9orf3-208ENST00000451893 CDT1Q9H211 546 aa23.68■■□□□ 1.38
C9orf3-208ENST00000451893 SLC38A7Q9NVC3 462 aa23.68■■□□□ 1.38
C9orf3-208ENST00000451893 KCND2Q9NZV8 630 aa23.68■■□□□ 1.38
C9orf3-208ENST00000451893 ARHGAP28Q9P2N2 729 aa23.68■■□□□ 1.38
C9orf3-208ENST00000451893 CLUHO75153 1309 aa23.67■■□□□ 1.38
C9orf3-208ENST00000451893 H0YCG3 227 aa23.67■■□□□ 1.38
C9orf3-208ENST00000451893 PLS3P13797 630 aa23.67■■□□□ 1.38
C9orf3-208ENST00000451893 DHX8Q14562 1220 aaKnown RBP23.67■■□□□ 1.38
C9orf3-208ENST00000451893 KLHL40Q2TBA0 621 aa23.67■■□□□ 1.38
C9orf3-208ENST00000451893 MPZL3Q6UWV2 235 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms