RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 RARS2Q5T160 578 aaKnown RBP18.69■□□□□ 0.58
PRPF40A-204ENST00000450303 ATF7IP2Q5U623 682 aa18.69■□□□□ 0.58
PRPF40A-204ENST00000450303 FMR1NBQ8N0W7 255 aaPredicted RBP18.69■□□□□ 0.58
PRPF40A-204ENST00000450303 ENGASEQ8NFI3 743 aa18.69■□□□□ 0.58
PRPF40A-204ENST00000450303 SLC22A17Q8WUG5 538 aa18.69■□□□□ 0.58
PRPF40A-204ENST00000450303 TIGD1Q96MW7 591 aa18.69■□□□□ 0.58
PRPF40A-204ENST00000450303 KLHL5Q96PQ7 755 aa18.69■□□□□ 0.58
PRPF40A-204ENST00000450303 ADPGKQ9BRR6 497 aa18.69■□□□□ 0.58
PRPF40A-204ENST00000450303 COLEC11Q9BWP8 271 aa18.69■□□□□ 0.58
PRPF40A-204ENST00000450303 MRPL17Q9NRX2 175 aaKnown RBP18.69■□□□□ 0.58
PRPF40A-204ENST00000450303 MUTYHQ9UIF7 546 aa18.69■□□□□ 0.58
PRPF40A-204ENST00000450303 GDAQ9Y2T3 454 aa18.69■□□□□ 0.58
PRPF40A-204ENST00000450303 TRIP11Q15643 1979 aa18.69■□□□□ 0.58
PRPF40A-204ENST00000450303 NPHP3-ACAD11A0A0J9YXS1 232 aa18.68■□□□□ 0.58
PRPF40A-204ENST00000450303 LOC730098B7Z3J9 87 aa18.68■□□□□ 0.58
PRPF40A-204ENST00000450303 NR1I2O75469 434 aa18.68■□□□□ 0.58
PRPF40A-204ENST00000450303 RECQL4O94761 1208 aa18.68■□□□□ 0.58
PRPF40A-204ENST00000450303 SOD2P04179 222 aa18.68■□□□□ 0.58
PRPF40A-204ENST00000450303 CNPP09543 421 aaKnown RBP18.68■□□□□ 0.58
PRPF40A-204ENST00000450303 HOXB8P17481 243 aaPredicted RBP18.68■□□□□ 0.58
PRPF40A-204ENST00000450303 GRIK3Q13003 919 aa18.68■□□□□ 0.58
PRPF40A-204ENST00000450303 CBX2Q14781 532 aaPredicted RBP18.68■□□□□ 0.58
PRPF40A-204ENST00000450303 SV2BQ7L1I2 683 aa18.68■□□□□ 0.58
PRPF40A-204ENST00000450303 FEZF2Q8TBJ5 459 aa18.68■□□□□ 0.58
PRPF40A-204ENST00000450303 LARP4BQ92615 738 aaKnown RBP18.68■□□□□ 0.58
PRPF40A-204ENST00000450303 RAD54LQ92698 747 aa18.68■□□□□ 0.58
PRPF40A-204ENST00000450303 SYAP1Q96A49 352 aaPredicted RBP18.68■□□□□ 0.58
PRPF40A-204ENST00000450303 B3GALT6Q96L58 329 aa18.68■□□□□ 0.58
PRPF40A-204ENST00000450303 PAAF1Q9BRP4 392 aa18.68■□□□□ 0.58
PRPF40A-204ENST00000450303 HERC2P3Q9BVR0 1158 aa18.68■□□□□ 0.58
PRPF40A-204ENST00000450303 EMILIN2Q9BXX0 1053 aa18.68■□□□□ 0.58
PRPF40A-204ENST00000450303 KMT5AQ9NQR1 393 aa18.68■□□□□ 0.58
PRPF40A-204ENST00000450303 CASTOR2A6NHX0 329 aa18.67■□□□□ 0.58
PRPF40A-204ENST00000450303 PTGESO14684 152 aa18.67■□□□□ 0.58
PRPF40A-204ENST00000450303 SLC16A4O15374 487 aa18.67■□□□□ 0.58
PRPF40A-204ENST00000450303 GPR37L1O60883 481 aa18.67■□□□□ 0.58
PRPF40A-204ENST00000450303 LILRB3O75022 631 aa18.67■□□□□ 0.58
PRPF40A-204ENST00000450303 URODP06132 367 aa18.67■□□□□ 0.58
PRPF40A-204ENST00000450303 SLFN14P0C7P3 912 aa18.67■□□□□ 0.58
PRPF40A-204ENST00000450303 PLA2G4BP0C869 781 aa18.67■□□□□ 0.58
PRPF40A-204ENST00000450303 MYBP10242 640 aa18.67■□□□□ 0.58
PRPF40A-204ENST00000450303 CACNB1Q02641 598 aaPredicted RBP18.67■□□□□ 0.58
PRPF40A-204ENST00000450303 DMP1Q13316 513 aaPredicted RBP18.67■□□□□ 0.58
PRPF40A-204ENST00000450303 SNW1Q13573 536 aaKnown RBP18.67■□□□□ 0.58
PRPF40A-204ENST00000450303 KLHL40Q2TBA0 621 aa18.67■□□□□ 0.58
PRPF40A-204ENST00000450303 KRBA2Q6ZNG9 492 aa18.67■□□□□ 0.58
PRPF40A-204ENST00000450303 SYT2Q8N9I0 419 aaPredicted RBP18.67■□□□□ 0.58
PRPF40A-204ENST00000450303 DRC1Q96MC2 740 aa18.67■□□□□ 0.58
PRPF40A-204ENST00000450303 GPR62Q9BZJ7 368 aa18.67■□□□□ 0.58
PRPF40A-204ENST00000450303 SERTAD1Q9UHV2 236 aa18.67■□□□□ 0.58
PRPF40A-204ENST00000450303 A0A087X0B3 334 aa18.66■□□□□ 0.58
PRPF40A-204ENST00000450303 EFEMP2O95967 443 aa18.66■□□□□ 0.58
PRPF40A-204ENST00000450303 GLUD2P49448 558 aa18.66■□□□□ 0.58
PRPF40A-204ENST00000450303 SLC12A3P55017 1021 aa18.66■□□□□ 0.58
PRPF40A-204ENST00000450303 DHX8Q14562 1220 aaKnown RBP18.66■□□□□ 0.58
PRPF40A-204ENST00000450303 E2F4Q16254 413 aa18.66■□□□□ 0.58
PRPF40A-204ENST00000450303 CES5AQ6NT32 575 aa18.66■□□□□ 0.58
PRPF40A-204ENST00000450303 TAS1R3Q7RTX0 852 aa18.66■□□□□ 0.58
PRPF40A-204ENST00000450303 ZBTB33Q86T24 672 aa18.66■□□□□ 0.58
PRPF40A-204ENST00000450303 GPT2Q8TD30 523 aa18.66■□□□□ 0.58
PRPF40A-204ENST00000450303 HASPINQ8TF76 798 aa18.66■□□□□ 0.58
PRPF40A-204ENST00000450303 ACO2Q99798 780 aaKnown RBP18.66■□□□□ 0.58
PRPF40A-204ENST00000450303 TARS2Q9BW92 718 aaKnown RBP18.66■□□□□ 0.58
PRPF40A-204ENST00000450303 GZF1Q9H116 711 aaPredicted RBP18.66■□□□□ 0.58
PRPF40A-204ENST00000450303 ADAM7Q9H2U9 754 aa18.66■□□□□ 0.58
PRPF40A-204ENST00000450303 TMEM134Q9H6X4 195 aa18.66■□□□□ 0.58
PRPF40A-204ENST00000450303 STK39Q9UEW8 545 aa18.66■□□□□ 0.58
PRPF40A-204ENST00000450303 PLXNA3P51805 1871 aa18.66■□□□□ 0.58
PRPF40A-204ENST00000450303 PHLPP2Q6ZVD8 1323 aa18.66■□□□□ 0.58
PRPF40A-204ENST00000450303 SPDYE4A6NLX3 237 aa18.65■□□□□ 0.58
PRPF40A-204ENST00000450303 TADA2AO75478 443 aa18.65■□□□□ 0.58
PRPF40A-204ENST00000450303 THP07101 528 aa18.65■□□□□ 0.58
PRPF40A-204ENST00000450303 GUCY2CP25092 1073 aa18.65■□□□□ 0.58
PRPF40A-204ENST00000450303 CLCN4P51793 760 aa18.65■□□□□ 0.58
PRPF40A-204ENST00000450303 OSTNP61366 133 aa18.65■□□□□ 0.58
PRPF40A-204ENST00000450303 TUSC3Q13454 348 aa18.65■□□□□ 0.58
PRPF40A-204ENST00000450303 DCAF4L1Q3SXM0 396 aa18.65■□□□□ 0.58
PRPF40A-204ENST00000450303 KIAA0319Q5VV43 1072 aa18.65■□□□□ 0.58
PRPF40A-204ENST00000450303 KIAA1841Q6NSI8 718 aa18.65■□□□□ 0.58
PRPF40A-204ENST00000450303 FUT10Q6P4F1 479 aa18.65■□□□□ 0.58
PRPF40A-204ENST00000450303 TMC5Q6UXY8 1006 aa18.65■□□□□ 0.58
PRPF40A-204ENST00000450303 PPFIBP1Q86W92 1011 aa18.65■□□□□ 0.58
PRPF40A-204ENST00000450303 ELOA2Q8IYF1 753 aaPredicted RBP18.65■□□□□ 0.58
PRPF40A-204ENST00000450303 RNF168Q8IYW5 571 aaPredicted RBP18.65■□□□□ 0.58
PRPF40A-204ENST00000450303 CEP120Q8N960 986 aa18.65■□□□□ 0.58
PRPF40A-204ENST00000450303 LRRC15Q8TF66 581 aa18.65■□□□□ 0.58
PRPF40A-204ENST00000450303 FBXL18Q96ME1 805 aa18.65■□□□□ 0.58
PRPF40A-204ENST00000450303 TNMDQ9H2S6 317 aa18.65■□□□□ 0.58
PRPF40A-204ENST00000450303 POMKQ9H5K3 350 aa18.65■□□□□ 0.58
PRPF40A-204ENST00000450303 BLOC1S4Q9NUP1 217 aa18.65■□□□□ 0.58
PRPF40A-204ENST00000450303 DZANK1Q9NVP4 752 aa18.65■□□□□ 0.58
PRPF40A-204ENST00000450303 ARHGAP28Q9P2N2 729 aa18.65■□□□□ 0.58
PRPF40A-204ENST00000450303 ADAM28Q9UKQ2 775 aa18.65■□□□□ 0.58
PRPF40A-204ENST00000450303 TNFSF13BQ9Y275 285 aa18.65■□□□□ 0.58
PRPF40A-204ENST00000450303 TEX28O15482 410 aa18.64■□□□□ 0.57
PRPF40A-204ENST00000450303 ACTN4O43707 911 aaKnown RBP18.64■□□□□ 0.57
PRPF40A-204ENST00000450303 MYL1P05976 194 aa18.64■□□□□ 0.57
PRPF40A-204ENST00000450303 ITIH3Q06033 890 aa18.64■□□□□ 0.57
PRPF40A-204ENST00000450303 MCM6Q14566 821 aa18.64■□□□□ 0.57
PRPF40A-204ENST00000450303 HSP90AA2PQ14568 343 aaPredicted RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms