RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 TRAPPC3O43617 180 aa24.08■■□□□ 1.45
CPSF7-208ENST00000450000 B3GAT3O94766 335 aa24.08■■□□□ 1.45
CPSF7-208ENST00000450000 C1RP00736 705 aa24.08■■□□□ 1.45
CPSF7-208ENST00000450000 EDN1P05305 212 aa24.08■■□□□ 1.45
CPSF7-208ENST00000450000 PLA2G4BP0C869 781 aa24.08■■□□□ 1.45
CPSF7-208ENST00000450000 HARSP12081 509 aaKnown RBP24.08■■□□□ 1.45
CPSF7-208ENST00000450000 RPL17P18621 184 aaKnown RBP24.08■■□□□ 1.45
CPSF7-208ENST00000450000 GBP2P32456 591 aaPredicted RBP24.08■■□□□ 1.45
CPSF7-208ENST00000450000 MATR3P43243 847 aaKnown RBP eCLIP24.08■■□□□ 1.45
CPSF7-208ENST00000450000 BRAPQ7Z569 592 aa24.08■■□□□ 1.45
CPSF7-208ENST00000450000 SYT2Q8N9I0 419 aaPredicted RBP24.08■■□□□ 1.45
CPSF7-208ENST00000450000 UROC1Q96N76 676 aa24.08■■□□□ 1.45
CPSF7-208ENST00000450000 PRRX2Q99811 253 aa24.08■■□□□ 1.45
CPSF7-208ENST00000450000 TARS2Q9BW92 718 aaKnown RBP24.08■■□□□ 1.45
CPSF7-208ENST00000450000 VPS37CA5D8V6 355 aaPredicted RBP24.07■■□□□ 1.44
CPSF7-208ENST00000450000 H0YCG3 227 aa24.07■■□□□ 1.44
CPSF7-208ENST00000450000 TGM5O43548 720 aa24.07■■□□□ 1.44
CPSF7-208ENST00000450000 EFEMP2O95967 443 aa24.07■■□□□ 1.44
CPSF7-208ENST00000450000 ASGR2P07307 311 aa24.07■■□□□ 1.44
CPSF7-208ENST00000450000 PLS3P13797 630 aa24.07■■□□□ 1.44
CPSF7-208ENST00000450000 PDCP20941 246 aa24.07■■□□□ 1.44
CPSF7-208ENST00000450000 GRM5P41594 1212 aa24.07■■□□□ 1.44
CPSF7-208ENST00000450000 PSMD5Q16401 504 aa24.07■■□□□ 1.44
CPSF7-208ENST00000450000 HYIQ5T013 277 aa24.07■■□□□ 1.44
CPSF7-208ENST00000450000 LIN9Q5TKA1 542 aa24.07■■□□□ 1.44
CPSF7-208ENST00000450000 DCLRE1AQ6PJP8 1040 aa24.07■■□□□ 1.44
CPSF7-208ENST00000450000 PRSS55Q6UWB4 352 aaPredicted RBP24.07■■□□□ 1.44
CPSF7-208ENST00000450000 KCNK18Q7Z418 384 aa24.07■■□□□ 1.44
CPSF7-208ENST00000450000 ACAP3Q96P50 834 aa24.07■■□□□ 1.44
CPSF7-208ENST00000450000 SLC38A7Q9NVC3 462 aa24.07■■□□□ 1.44
CPSF7-208ENST00000450000 ARHGAP28Q9P2N2 729 aa24.07■■□□□ 1.44
CPSF7-208ENST00000450000 SLC26A4O43511 780 aa24.06■■□□□ 1.44
CPSF7-208ENST00000450000 RFPL2O75678 378 aa24.06■■□□□ 1.44
CPSF7-208ENST00000450000 KRT18P05783 430 aaKnown RBP24.06■■□□□ 1.44
CPSF7-208ENST00000450000 MCF2P10911 925 aa24.06■■□□□ 1.44
CPSF7-208ENST00000450000 RTP2Q5QGT7 225 aa24.06■■□□□ 1.44
CPSF7-208ENST00000450000 MPZL3Q6UWV2 235 aa24.06■■□□□ 1.44
CPSF7-208ENST00000450000 DAW1Q8N136 415 aa24.06■■□□□ 1.44
CPSF7-208ENST00000450000 SPIRE2Q8WWL2 714 aa24.06■■□□□ 1.44
CPSF7-208ENST00000450000 BICD1Q96G01 975 aa24.06■■□□□ 1.44
CPSF7-208ENST00000450000 PNMA5Q96PV4 448 aa24.06■■□□□ 1.44
CPSF7-208ENST00000450000 CDT1Q9H211 546 aa24.06■■□□□ 1.44
CPSF7-208ENST00000450000 MFSD1Q9H3U5 465 aa24.06■■□□□ 1.44
CPSF7-208ENST00000450000 ZDHHC7Q9NXF8 308 aa24.06■■□□□ 1.44
CPSF7-208ENST00000450000 LARSQ9P2J5 1176 aaKnown RBP24.06■■□□□ 1.44
CPSF7-208ENST00000450000 ANKFY1Q9P2R3 1169 aa24.06■■□□□ 1.44
CPSF7-208ENST00000450000 DHX8Q14562 1220 aaKnown RBP24.05■■□□□ 1.44
CPSF7-208ENST00000450000 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.05■■□□□ 1.44
CPSF7-208ENST00000450000 PIK3R5Q8WYR1 880 aa24.05■■□□□ 1.44
CPSF7-208ENST00000450000 DDX27Q96GQ7 796 aaKnown RBP24.05■■□□□ 1.44
CPSF7-208ENST00000450000 WDR6Q9NNW5 1121 aaKnown RBP24.05■■□□□ 1.44
CPSF7-208ENST00000450000 TDRD15B5MCY1 1934 aaKnown RBP24.05■■□□□ 1.44
CPSF7-208ENST00000450000 BRD1O95696 1058 aa24.04■■□□□ 1.44
CPSF7-208ENST00000450000 CLCNKBP51801 687 aa24.04■■□□□ 1.44
CPSF7-208ENST00000450000 ASIC4Q96FT7 647 aa24.04■■□□□ 1.44
CPSF7-208ENST00000450000 PPP1R10Q96QC0 940 aaKnown RBP24.04■■□□□ 1.44
CPSF7-208ENST00000450000 NTPCRQ9BSD7 190 aaKnown RBP24.04■■□□□ 1.44
CPSF7-208ENST00000450000 CXCL16Q9H2A7 254 aa24.04■■□□□ 1.44
CPSF7-208ENST00000450000 CLUHO75153 1309 aa24.04■■□□□ 1.44
CPSF7-208ENST00000450000 C5orf42Q9H799 3197 aa24.03■■□□□ 1.44
CPSF7-208ENST00000450000 SMIM28A0A1B0GU29 152 aa24.03■■□□□ 1.44
CPSF7-208ENST00000450000 LONP1P36776 959 aaKnown RBP24.03■■□□□ 1.44
CPSF7-208ENST00000450000 SLC12A3P55017 1021 aa24.03■■□□□ 1.44
CPSF7-208ENST00000450000 MAPK7Q13164 816 aa24.03■■□□□ 1.44
CPSF7-208ENST00000450000 CEP120Q8N960 986 aa24.03■■□□□ 1.44
CPSF7-208ENST00000450000 RHOBTB2Q9BYZ6 727 aa24.03■■□□□ 1.44
CPSF7-208ENST00000450000 PRKD2Q9BZL6 878 aa24.03■■□□□ 1.44
CPSF7-208ENST00000450000 ZHX3Q9H4I2 956 aa24.03■■□□□ 1.44
CPSF7-208ENST00000450000 TMEM189-UBE2V1I3L0A0 370 aa24.02■■□□□ 1.44
CPSF7-208ENST00000450000 CLDN3O15551 220 aa24.02■■□□□ 1.44
CPSF7-208ENST00000450000 TOM1L1O75674 476 aa24.02■■□□□ 1.44
CPSF7-208ENST00000450000 ZMYND10O75800 440 aa24.02■■□□□ 1.44
CPSF7-208ENST00000450000 FAM13AO94988 1023 aa24.02■■□□□ 1.44
CPSF7-208ENST00000450000 CACNB1Q02641 598 aaPredicted RBP24.02■■□□□ 1.44
CPSF7-208ENST00000450000 TDGQ13569 410 aa24.02■■□□□ 1.44
CPSF7-208ENST00000450000 NOLC1Q14978 699 aaKnown RBP eCLIP24.02■■□□□ 1.44
CPSF7-208ENST00000450000 SF3A1Q15459 793 aaKnown RBP24.02■■□□□ 1.44
CPSF7-208ENST00000450000 NAB2Q15742 525 aa24.02■■□□□ 1.44
CPSF7-208ENST00000450000 TMEM119Q4V9L6 283 aa24.02■■□□□ 1.44
CPSF7-208ENST00000450000 PPM1LQ5SGD2 360 aa24.02■■□□□ 1.44
CPSF7-208ENST00000450000 GPBP1Q86WP2 473 aa24.02■■□□□ 1.44
CPSF7-208ENST00000450000 LNX1Q8TBB1 728 aaPredicted RBP24.02■■□□□ 1.44
CPSF7-208ENST00000450000 PTPRHQ9HD43 1115 aa24.02■■□□□ 1.44
CPSF7-208ENST00000450000 IGSF9Q9P2J2 1179 aa24.02■■□□□ 1.44
CPSF7-208ENST00000450000 FBXL21Q9UKT6 434 aa24.02■■□□□ 1.44
CPSF7-208ENST00000450000 NUB1Q9Y5A7 615 aa24.02■■□□□ 1.44
CPSF7-208ENST00000450000 PTPN5P54829 565 aa24.01■■□□□ 1.43
CPSF7-208ENST00000450000 UPP1Q16831 310 aa24.01■■□□□ 1.43
CPSF7-208ENST00000450000 LILRA6Q6PI73 481 aa24.01■■□□□ 1.43
CPSF7-208ENST00000450000 TAS1R3Q7RTX0 852 aa24.01■■□□□ 1.43
CPSF7-208ENST00000450000 MYCT1Q8N699 235 aa24.01■■□□□ 1.43
CPSF7-208ENST00000450000 TMEM161BQ8NDZ6 487 aa24.01■■□□□ 1.43
CPSF7-208ENST00000450000 FEZF2Q8TBJ5 459 aa24.01■■□□□ 1.43
CPSF7-208ENST00000450000 CLSTN3Q9BQT9 956 aa24.01■■□□□ 1.43
CPSF7-208ENST00000450000 GOLGA2P5Q9HBQ8 144 aa24.01■■□□□ 1.43
CPSF7-208ENST00000450000 ODF2LQ9ULJ1 636 aa24.01■■□□□ 1.43
CPSF7-208ENST00000450000 POLIQ9UNA4 740 aa24.01■■□□□ 1.43
CPSF7-208ENST00000450000 NPHP3-ACAD11A0A0J9YXS1 232 aa24■■□□□ 1.43
CPSF7-208ENST00000450000 XYLBO75191 536 aa24■■□□□ 1.43
CPSF7-208ENST00000450000 TBCAO75347 108 aaKnown RBP24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms