RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 HYIQ5T013 277 aa14.36□□□□□ -0.11
SYNGAP1-204ENST00000449372 FRMD5Q7Z6J6 570 aa14.36□□□□□ -0.11
SYNGAP1-204ENST00000449372 VSIG1Q86XK7 387 aa14.36□□□□□ -0.11
SYNGAP1-204ENST00000449372 SCFD2Q8WU76 684 aa14.36□□□□□ -0.11
SYNGAP1-204ENST00000449372 ABTB1Q969K4 478 aaPredicted RBP14.36□□□□□ -0.11
SYNGAP1-204ENST00000449372 HAPLN3Q96S86 360 aa14.36□□□□□ -0.11
SYNGAP1-204ENST00000449372 DDX50Q9BQ39 737 aaKnown RBP14.36□□□□□ -0.11
SYNGAP1-204ENST00000449372 PLVAPQ9BX97 442 aa14.36□□□□□ -0.11
SYNGAP1-204ENST00000449372 PSTPIP2Q9H939 334 aa14.36□□□□□ -0.11
SYNGAP1-204ENST00000449372 BARX2Q9UMQ3 279 aaPredicted RBP14.36□□□□□ -0.11
SYNGAP1-204ENST00000449372 FAM187AA6NFU0 413 aa14.35□□□□□ -0.11
SYNGAP1-204ENST00000449372 XRCC5P13010 732 aaKnown RBP14.35□□□□□ -0.11
SYNGAP1-204ENST00000449372 SH3BGRP55822 239 aaPredicted RBP14.35□□□□□ -0.11
SYNGAP1-204ENST00000449372 ARID5AQ03989 594 aa14.35□□□□□ -0.11
SYNGAP1-204ENST00000449372 ECM1Q16610 540 aa14.35□□□□□ -0.11
SYNGAP1-204ENST00000449372 EXOC3L4Q17RC7 722 aa14.35□□□□□ -0.11
SYNGAP1-204ENST00000449372 SNX30Q5VWJ9 437 aa14.35□□□□□ -0.11
SYNGAP1-204ENST00000449372 KCTD17Q8N5Z5 321 aa14.35□□□□□ -0.11
SYNGAP1-204ENST00000449372 TMEM237Q96Q45 408 aa14.35□□□□□ -0.11
SYNGAP1-204ENST00000449372 FMO2Q99518 471 aa14.35□□□□□ -0.11
SYNGAP1-204ENST00000449372 HERC5Q9UII4 1024 aaKnown RBP14.35□□□□□ -0.11
SYNGAP1-204ENST00000449372 PCDHA12Q9UN75 941 aa14.35□□□□□ -0.11
SYNGAP1-204ENST00000449372 SIGLEC16A6NMB1 481 aa14.35□□□□□ -0.11
SYNGAP1-204ENST00000449372 ZCCHC18P0CG32 403 aa14.35□□□□□ -0.11
SYNGAP1-204ENST00000449372 MARSP56192 900 aaKnown RBP14.35□□□□□ -0.11
SYNGAP1-204ENST00000449372 SPDYE2Q495Y8 402 aa14.35□□□□□ -0.11
SYNGAP1-204ENST00000449372 CCDC92Q53HC0 331 aaPredicted RBP14.35□□□□□ -0.11
SYNGAP1-204ENST00000449372 WASHC2DQ5SRD0 308 aa14.35□□□□□ -0.11
SYNGAP1-204ENST00000449372 CTNNBL1Q8WYA6 563 aaPredicted RBP14.35□□□□□ -0.11
SYNGAP1-204ENST00000449372 TRIM31Q9BZY9 425 aa14.35□□□□□ -0.11
SYNGAP1-204ENST00000449372 LRMDAQ9H2I8 198 aa14.35□□□□□ -0.11
SYNGAP1-204ENST00000449372 TBCAO75347 108 aaKnown RBP14.35□□□□□ -0.11
SYNGAP1-204ENST00000449372 AGTP01019 485 aa14.35□□□□□ -0.11
SYNGAP1-204ENST00000449372 LMNAP02545 664 aaKnown RBP14.35□□□□□ -0.11
SYNGAP1-204ENST00000449372 CYP1A1P04798 512 aaPredicted RBP14.35□□□□□ -0.11
SYNGAP1-204ENST00000449372 UBTFL6P0CB48 400 aaPredicted RBP14.35□□□□□ -0.11
SYNGAP1-204ENST00000449372 MAP3K10Q02779 954 aa14.35□□□□□ -0.11
SYNGAP1-204ENST00000449372 CCDC15Q0P6D6 951 aa14.35□□□□□ -0.11
SYNGAP1-204ENST00000449372 DENND2CQ68D51 928 aa14.35□□□□□ -0.11
SYNGAP1-204ENST00000449372 MIS12Q9H081 205 aa14.35□□□□□ -0.11
SYNGAP1-204ENST00000449372 LARSQ9P2J5 1176 aaKnown RBP14.35□□□□□ -0.11
SYNGAP1-204ENST00000449372 ZNF70Q9UC06 446 aaPredicted RBP14.35□□□□□ -0.11
SYNGAP1-204ENST00000449372 GH2P01242 217 aa14.35□□□□□ -0.11
SYNGAP1-204ENST00000449372 STAT1P42224 750 aa14.35□□□□□ -0.11
SYNGAP1-204ENST00000449372 CETN1Q12798 172 aa14.35□□□□□ -0.11
SYNGAP1-204ENST00000449372 MAP7Q14244 749 aa14.35□□□□□ -0.11
SYNGAP1-204ENST00000449372 ALKBH5Q6P6C2 394 aaKnown RBP14.35□□□□□ -0.11
SYNGAP1-204ENST00000449372 FAM151AQ8WW52 585 aa14.35□□□□□ -0.11
SYNGAP1-204ENST00000449372 ZNF653Q96CK0 615 aa14.35□□□□□ -0.11
SYNGAP1-204ENST00000449372 CORO1BQ9BR76 489 aa14.35□□□□□ -0.11
SYNGAP1-204ENST00000449372 SUCLA2Q9P2R7 463 aaPredicted RBP14.35□□□□□ -0.11
SYNGAP1-204ENST00000449372 ADAMTS1Q9UHI8 967 aa14.35□□□□□ -0.11
SYNGAP1-204ENST00000449372 PITPNM2Q9BZ72 1349 aa14.34□□□□□ -0.11
SYNGAP1-204ENST00000449372 ASTE1Q2TB18 679 aaPredicted RBP14.34□□□□□ -0.11
SYNGAP1-204ENST00000449372 OLFML2BQ68BL8 750 aa14.34□□□□□ -0.11
SYNGAP1-204ENST00000449372 WDR60Q8WVS4 1066 aa14.34□□□□□ -0.11
SYNGAP1-204ENST00000449372 CSRNP1Q96S65 589 aa14.34□□□□□ -0.11
SYNGAP1-204ENST00000449372 DDX25Q9UHL0 483 aaKnown RBP14.34□□□□□ -0.11
SYNGAP1-204ENST00000449372 EPHB6O15197 1021 aa14.34□□□□□ -0.11
SYNGAP1-204ENST00000449372 TTI1O43156 1089 aa14.34□□□□□ -0.11
SYNGAP1-204ENST00000449372 KPNB1Q14974 876 aaKnown RBP14.34□□□□□ -0.11
SYNGAP1-204ENST00000449372 C6orf118Q5T5N4 469 aa14.34□□□□□ -0.11
SYNGAP1-204ENST00000449372 FKBP1CQ5VVH2 108 aa14.34□□□□□ -0.11
SYNGAP1-204ENST00000449372 LRRC55Q6ZSA7 311 aa14.34□□□□□ -0.11
SYNGAP1-204ENST00000449372 CCDC80Q76M96 950 aa14.34□□□□□ -0.11
SYNGAP1-204ENST00000449372 KCNK18Q7Z418 384 aa14.34□□□□□ -0.11
SYNGAP1-204ENST00000449372 DEFB132Q7Z7B7 95 aa14.34□□□□□ -0.11
SYNGAP1-204ENST00000449372 STKLD1Q8NE28 680 aa14.34□□□□□ -0.11
SYNGAP1-204ENST00000449372 NEK9Q8TD19 979 aa14.34□□□□□ -0.11
SYNGAP1-204ENST00000449372 LENG1Q96BZ8 264 aaPredicted RBP14.34□□□□□ -0.11
SYNGAP1-204ENST00000449372 CENPKQ9BS16 269 aa14.34□□□□□ -0.11
SYNGAP1-204ENST00000449372 EMILIN3Q9NT22 766 aa14.34□□□□□ -0.11
SYNGAP1-204ENST00000449372 HAO1Q9UJM8 370 aa14.34□□□□□ -0.11
SYNGAP1-204ENST00000449372 POTEMA6NI47 508 aa14.34□□□□□ -0.11
SYNGAP1-204ENST00000449372 USP17L15C9J2P7 530 aa14.34□□□□□ -0.11
SYNGAP1-204ENST00000449372 USP17L13C9JLJ4 530 aa14.34□□□□□ -0.11
SYNGAP1-204ENST00000449372 BHMG1C9JSJ3 638 aaPredicted RBP14.34□□□□□ -0.11
SYNGAP1-204ENST00000449372 USP17L11C9JVI0 530 aa14.34□□□□□ -0.11
SYNGAP1-204ENST00000449372 USP17L18D6R9N7 530 aa14.34□□□□□ -0.11
SYNGAP1-204ENST00000449372 USP17L22D6RA61 530 aa14.34□□□□□ -0.11
SYNGAP1-204ENST00000449372 USP17L17D6RBQ6 530 aa14.34□□□□□ -0.11
SYNGAP1-204ENST00000449372 USP17L19D6RCP7 530 aa14.34□□□□□ -0.11
SYNGAP1-204ENST00000449372 USP17L20D6RJB6 530 aa14.34□□□□□ -0.11
SYNGAP1-204ENST00000449372 ATP5HO75947 161 aa14.34□□□□□ -0.11
SYNGAP1-204ENST00000449372 ASLP04424 464 aa14.34□□□□□ -0.11
SYNGAP1-204ENST00000449372 NUDT17P0C025 328 aa14.34□□□□□ -0.11
SYNGAP1-204ENST00000449372 KLRC1P26715 233 aa14.34□□□□□ -0.11
SYNGAP1-204ENST00000449372 USP17L24Q0WX57 530 aa14.34□□□□□ -0.11
SYNGAP1-204ENST00000449372 USP17L6PQ6QN14 398 aa14.34□□□□□ -0.11
SYNGAP1-204ENST00000449372 MOXD1Q6UVY6 613 aa14.34□□□□□ -0.11
SYNGAP1-204ENST00000449372 INTS8Q75QN2 995 aaKnown RBP14.34□□□□□ -0.11
SYNGAP1-204ENST00000449372 GPBP1Q86WP2 473 aa14.34□□□□□ -0.11
SYNGAP1-204ENST00000449372 FBXO41Q8TF61 875 aa14.34□□□□□ -0.11
SYNGAP1-204ENST00000449372 SLC16A10Q8TF71 515 aa14.34□□□□□ -0.11
SYNGAP1-204ENST00000449372 DENND2DQ9H6A0 471 aaPredicted RBP14.34□□□□□ -0.11
SYNGAP1-204ENST00000449372 ZNF277Q9NRM2 450 aaPredicted RBP14.34□□□□□ -0.11
SYNGAP1-204ENST00000449372 PRKAG3Q9UGI9 489 aa14.34□□□□□ -0.11
SYNGAP1-204ENST00000449372 SH3GLB1Q9Y371 365 aa14.34□□□□□ -0.11
SYNGAP1-204ENST00000449372 PCDHA1Q9Y5I3 950 aa14.34□□□□□ -0.11
SYNGAP1-204ENST00000449372 TBC1D12O60347 775 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms