RNA–Protein interactions for RNA: ENST00000449307.3

AC006001.3-201, humanhuman

TSL 3 BASIC

Gene AC006001.3, Length 7,092 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.3-201ENST00000449307 HLA-DPA1P20036 260 aa13.47□□□□□ -0.25
AC006001.3-201ENST00000449307 PBLDP30039 288 aaPredicted RBP13.47□□□□□ -0.25
AC006001.3-201ENST00000449307 SLC7A5Q01650 507 aa13.47□□□□□ -0.25
AC006001.3-201ENST00000449307 EMC2Q15006 297 aa13.47□□□□□ -0.25
AC006001.3-201ENST00000449307 CEP55Q53EZ4 464 aa13.47□□□□□ -0.25
AC006001.3-201ENST00000449307 ZNF564Q8TBZ8 553 aaPredicted RBP13.47□□□□□ -0.25
AC006001.3-201ENST00000449307 STAP2Q9UGK3 403 aa13.47□□□□□ -0.25
AC006001.3-201ENST00000449307 RGS12O14924 1447 aa13.47□□□□□ -0.25
AC006001.3-201ENST00000449307 NDUFB10O96000 172 aa13.47□□□□□ -0.25
AC006001.3-201ENST00000449307 CASP1P29466 404 aa13.47□□□□□ -0.25
AC006001.3-201ENST00000449307 PRKCEQ02156 737 aa13.47□□□□□ -0.25
AC006001.3-201ENST00000449307 CHSY1Q86X52 802 aa13.47□□□□□ -0.25
AC006001.3-201ENST00000449307 LRRC8AQ8IWT6 810 aa13.47□□□□□ -0.25
AC006001.3-201ENST00000449307 MARCH10Q8NA82 808 aaPredicted RBP13.47□□□□□ -0.25
AC006001.3-201ENST00000449307 CHST13Q8NET6 341 aa13.47□□□□□ -0.25
AC006001.3-201ENST00000449307 CSGALNACT1Q8TDX6 532 aa13.47□□□□□ -0.25
AC006001.3-201ENST00000449307 OTUB1Q96FW1 271 aaPredicted RBP13.47□□□□□ -0.25
AC006001.3-201ENST00000449307 PPP1R13BQ96KQ4 1090 aa13.47□□□□□ -0.25
AC006001.3-201ENST00000449307 SENP6Q9GZR1 1112 aaPredicted RBP13.47□□□□□ -0.25
AC006001.3-201ENST00000449307 A0A1W2PQ27 194 aa13.47□□□□□ -0.25
AC006001.3-201ENST00000449307 A0A1W2PQ64 194 aa13.47□□□□□ -0.25
AC006001.3-201ENST00000449307 A0A1W2PQD8 194 aa13.47□□□□□ -0.25
AC006001.3-201ENST00000449307 TRIM49BA6NDI0 452 aa13.47□□□□□ -0.25
AC006001.3-201ENST00000449307 ODC1P11926 461 aa13.47□□□□□ -0.25
AC006001.3-201ENST00000449307 AP3M2P53677 418 aa13.47□□□□□ -0.25
AC006001.3-201ENST00000449307 MRPS31Q92665 395 aaKnown RBP13.47□□□□□ -0.25
AC006001.3-201ENST00000449307 CDKL3Q8IVW4 592 aaPredicted RBP13.46□□□□□ -0.25
AC006001.3-201ENST00000449307 CARNMT1Q8N4J0 409 aa13.46□□□□□ -0.25
AC006001.3-201ENST00000449307 THOC1Q96FV9 657 aaKnown RBP13.46□□□□□ -0.25
AC006001.3-201ENST00000449307 LATS2Q9NRM7 1088 aa13.46□□□□□ -0.25
AC006001.3-201ENST00000449307 GJB4Q9NTQ9 266 aa13.46□□□□□ -0.25
AC006001.3-201ENST00000449307 TMEM63CQ9P1W3 806 aa13.46□□□□□ -0.25
AC006001.3-201ENST00000449307 TMPRSS15P98073 1019 aa13.46□□□□□ -0.25
AC006001.3-201ENST00000449307 KCNH2Q12809 1159 aa13.46□□□□□ -0.25
AC006001.3-201ENST00000449307 ATG4CQ96DT6 458 aa13.46□□□□□ -0.25
AC006001.3-201ENST00000449307 PKP3Q9Y446 797 aa13.46□□□□□ -0.25
AC006001.3-201ENST00000449307 ADGRL2O95490 1459 aa13.46□□□□□ -0.25
AC006001.3-201ENST00000449307 FGGP02679 453 aa13.46□□□□□ -0.25
AC006001.3-201ENST00000449307 NR3C2P08235 984 aa13.46□□□□□ -0.25
AC006001.3-201ENST00000449307 HMOX2P30519 316 aa13.46□□□□□ -0.25
AC006001.3-201ENST00000449307 TCF7P36402 384 aaPredicted RBP13.46□□□□□ -0.25
AC006001.3-201ENST00000449307 PLCL1Q15111 1095 aa13.46□□□□□ -0.25
AC006001.3-201ENST00000449307 EPHA7Q15375 998 aa13.46□□□□□ -0.25
AC006001.3-201ENST00000449307 ACAD11Q709F0 780 aa13.46□□□□□ -0.25
AC006001.3-201ENST00000449307 OXER1Q8TDS5 423 aa13.46□□□□□ -0.25
AC006001.3-201ENST00000449307 ZFP42Q96MM3 310 aa13.46□□□□□ -0.25
AC006001.3-201ENST00000449307 MED15Q96RN5 788 aa13.46□□□□□ -0.25
AC006001.3-201ENST00000449307 UPF3AQ9H1J1 476 aaKnown RBP13.46□□□□□ -0.25
AC006001.3-201ENST00000449307 KLHL11Q9NVR0 708 aa13.46□□□□□ -0.25
AC006001.3-201ENST00000449307 KPNA7A9QM74 516 aa13.46□□□□□ -0.26
AC006001.3-201ENST00000449307 KRT7P08729 469 aa13.46□□□□□ -0.26
AC006001.3-201ENST00000449307 AGBL1Q96MI9 1066 aa13.46□□□□□ -0.26
AC006001.3-201ENST00000449307 NCAPD2Q15021 1401 aa13.46□□□□□ -0.26
AC006001.3-201ENST00000449307 TTC37Q6PGP7 1564 aa13.46□□□□□ -0.26
AC006001.3-201ENST00000449307 TBKBP1A7MCY6 615 aa13.46□□□□□ -0.26
AC006001.3-201ENST00000449307 NDUFS3O75489 264 aa13.46□□□□□ -0.26
AC006001.3-201ENST00000449307 CKMP06732 381 aa13.46□□□□□ -0.26
AC006001.3-201ENST00000449307 TRIM49P0CI25 452 aa13.46□□□□□ -0.26
AC006001.3-201ENST00000449307 TRIM49CP0CI26 452 aa13.46□□□□□ -0.26
AC006001.3-201ENST00000449307 ZFXP17010 805 aaPredicted RBP13.46□□□□□ -0.26
AC006001.3-201ENST00000449307 PCSK1P29120 753 aa13.46□□□□□ -0.26
AC006001.3-201ENST00000449307 CHCHD3Q9NX63 227 aaKnown RBP13.46□□□□□ -0.26
AC006001.3-201ENST00000449307 KDM1AO60341 852 aa13.45□□□□□ -0.26
AC006001.3-201ENST00000449307 EFCAB14O75071 495 aa13.45□□□□□ -0.26
AC006001.3-201ENST00000449307 GRAP2O75791 330 aa13.45□□□□□ -0.26
AC006001.3-201ENST00000449307 GLRA4Q5JXX5 417 aa13.45□□□□□ -0.26
AC006001.3-201ENST00000449307 ASPSCR1Q9BZE9 553 aa13.45□□□□□ -0.26
AC006001.3-201ENST00000449307 CLASP1Q7Z460 1538 aa13.45□□□□□ -0.26
AC006001.3-201ENST00000449307 PATL1Q86TB9 770 aaKnown RBP13.45□□□□□ -0.26
AC006001.3-201ENST00000449307 PPP1R9AQ9ULJ8 1098 aa13.45□□□□□ -0.26
AC006001.3-201ENST00000449307 KRT37O76014 449 aa13.45□□□□□ -0.26
AC006001.3-201ENST00000449307 GFAPP14136 432 aa13.45□□□□□ -0.26
AC006001.3-201ENST00000449307 SP100P23497 879 aaPredicted RBP13.45□□□□□ -0.26
AC006001.3-201ENST00000449307 MZF1P28698 734 aaPredicted RBP13.45□□□□□ -0.26
AC006001.3-201ENST00000449307 RFX3P48380 749 aa13.45□□□□□ -0.26
AC006001.3-201ENST00000449307 PPP1R36Q96LQ0 422 aa13.45□□□□□ -0.26
AC006001.3-201ENST00000449307 VCPKMTQ9H867 229 aa13.45□□□□□ -0.26
AC006001.3-201ENST00000449307 C5orf58C9J3I9 102 aa13.45□□□□□ -0.26
AC006001.3-201ENST00000449307 HBP1O60381 514 aa13.45□□□□□ -0.26
AC006001.3-201ENST00000449307 ENTPD3O75355 529 aa13.45□□□□□ -0.26
AC006001.3-201ENST00000449307 SUPT20HL2P0C7V6 817 aa13.45□□□□□ -0.26
AC006001.3-201ENST00000449307 DPYDQ12882 1025 aa13.45□□□□□ -0.26
AC006001.3-201ENST00000449307 PTRHD1Q6GMV3 140 aaKnown RBP13.45□□□□□ -0.26
AC006001.3-201ENST00000449307 LINC00301Q8NCQ3 95 aa13.45□□□□□ -0.26
AC006001.3-201ENST00000449307 PIP4K2CQ8TBX8 421 aa13.45□□□□□ -0.26
AC006001.3-201ENST00000449307 SERPINI1Q99574 410 aa13.45□□□□□ -0.26
AC006001.3-201ENST00000449307 PARVAQ9NVD7 372 aa13.45□□□□□ -0.26
AC006001.3-201ENST00000449307 RGL4Q8IZJ4 473 aa13.45□□□□□ -0.26
AC006001.3-201ENST00000449307 PPM1NQ8N819 430 aa13.45□□□□□ -0.26
AC006001.3-201ENST00000449307 AGR3Q8TD06 166 aa13.45□□□□□ -0.26
AC006001.3-201ENST00000449307 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.45□□□□□ -0.26
AC006001.3-201ENST00000449307 NMT1P30419 496 aaKnown RBP13.45□□□□□ -0.26
AC006001.3-201ENST00000449307 EPHB3P54753 998 aa13.45□□□□□ -0.26
AC006001.3-201ENST00000449307 DRAP1Q14919 205 aaPredicted RBP13.45□□□□□ -0.26
AC006001.3-201ENST00000449307 ZRANB3Q5FWF4 1079 aa13.45□□□□□ -0.26
AC006001.3-201ENST00000449307 COL23A1Q86Y22 540 aaPredicted RBP13.45□□□□□ -0.26
AC006001.3-201ENST00000449307 HIPK4Q8NE63 616 aa13.45□□□□□ -0.26
AC006001.3-201ENST00000449307 B4GALNT2Q8NHY0 566 aa13.45□□□□□ -0.26
AC006001.3-201ENST00000449307 SLC13A1Q9BZW2 595 aa13.45□□□□□ -0.26
AC006001.3-201ENST00000449307 LCMT1Q9UIC8 334 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms