RNA–Protein interactions for RNA: ENST00000449261.6

BRPF3-206, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5

Gene BRPF3, Length 4,816 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-206ENST00000449261 VIL1P09327 827 aaKnown RBP12.1□□□□□ -0.47
BRPF3-206ENST00000449261 MYBL1P10243 752 aa12.1□□□□□ -0.47
BRPF3-206ENST00000449261 IL1R1P14778 569 aa12.1□□□□□ -0.47
BRPF3-206ENST00000449261 ARL4CP56559 192 aa12.1□□□□□ -0.47
BRPF3-206ENST00000449261 C9orf131Q5VYM1 1079 aa12.1□□□□□ -0.47
BRPF3-206ENST00000449261 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.1□□□□□ -0.478e-6■■□□□ 11.7
BRPF3-206ENST00000449261 DDX47Q9H0S4 455 aaKnown RBP12.1□□□□□ -0.47
BRPF3-206ENST00000449261 ERAP1Q9NZ08 941 aa12.1□□□□□ -0.47
BRPF3-206ENST00000449261 APEX2Q9UBZ4 518 aa12.1□□□□□ -0.47
BRPF3-206ENST00000449261 MSH4O15457 936 aa12.1□□□□□ -0.47
BRPF3-206ENST00000449261 CPB1P15086 417 aa12.1□□□□□ -0.47
BRPF3-206ENST00000449261 BCAR1P56945 870 aa12.1□□□□□ -0.47
BRPF3-206ENST00000449261 RBP5P82980 135 aa12.1□□□□□ -0.47
BRPF3-206ENST00000449261 PUS10Q3MIT2 529 aaKnown RBP12.1□□□□□ -0.47
BRPF3-206ENST00000449261 SPOPLQ6IQ16 392 aa12.1□□□□□ -0.47
BRPF3-206ENST00000449261 ZNF449Q6P9G9 518 aa12.1□□□□□ -0.47
BRPF3-206ENST00000449261 PACS2Q86VP3 889 aa12.1□□□□□ -0.47
BRPF3-206ENST00000449261 CATSPER3Q86XQ3 398 aa12.1□□□□□ -0.47
BRPF3-206ENST00000449261 LRRC71Q8N4P6 559 aa12.1□□□□□ -0.47
BRPF3-206ENST00000449261 CCDC197Q8NCU1 140 aa12.1□□□□□ -0.47
BRPF3-206ENST00000449261 CHP1Q99653 195 aa12.1□□□□□ -0.47
BRPF3-206ENST00000449261 CACYBPQ9HB71 228 aaKnown RBP12.1□□□□□ -0.47
BRPF3-206ENST00000449261 ANKEF1Q9NU02 776 aa12.1□□□□□ -0.47
BRPF3-206ENST00000449261 TTC7AQ9ULT0 858 aaPredicted RBP12.1□□□□□ -0.47
BRPF3-206ENST00000449261 PACSIN2Q9UNF0 486 aaPredicted RBP12.1□□□□□ -0.47
BRPF3-206ENST00000449261 MAP2P11137 1827 aaKnown RBP12.1□□□□□ -0.47
BRPF3-206ENST00000449261 ASAP2O43150 1006 aa12.09□□□□□ -0.47
BRPF3-206ENST00000449261 SART1O43290 800 aaKnown RBP12.09□□□□□ -0.47
BRPF3-206ENST00000449261 SSTR3P32745 418 aaPredicted RBP12.09□□□□□ -0.47
BRPF3-206ENST00000449261 NCOA4Q13772 614 aa12.09□□□□□ -0.47
BRPF3-206ENST00000449261 SEC23AQ15436 765 aa12.09□□□□□ -0.47
BRPF3-206ENST00000449261 SLC44A4Q53GD3 710 aa12.09□□□□□ -0.47
BRPF3-206ENST00000449261 MAP3K21Q5TCX8 1036 aa12.09□□□□□ -0.47
BRPF3-206ENST00000449261 FBXO38Q6PIJ6 1188 aa12.09□□□□□ -0.47
BRPF3-206ENST00000449261 STK33Q9BYT3 514 aa12.09□□□□□ -0.47
BRPF3-206ENST00000449261 EHD4Q9H223 541 aa12.09□□□□□ -0.47
BRPF3-206ENST00000449261 KDM4FA0A1W2PPD8 638 aa12.09□□□□□ -0.47
BRPF3-206ENST00000449261 CCDC189A1A4V9 331 aa12.09□□□□□ -0.47
BRPF3-206ENST00000449261 USP27XA6NNY8 438 aa12.09□□□□□ -0.47
BRPF3-206ENST00000449261 HBP1O60381 514 aa12.09□□□□□ -0.47
BRPF3-206ENST00000449261 CYP2C9P11712 490 aa12.09□□□□□ -0.47
BRPF3-206ENST00000449261 UCHL3P15374 230 aa12.09□□□□□ -0.47
BRPF3-206ENST00000449261 BACE1P56817 501 aa12.09□□□□□ -0.47
BRPF3-206ENST00000449261 MAP3K7CLP57077 242 aa12.09□□□□□ -0.47
BRPF3-206ENST00000449261 COG7P83436 770 aa12.09□□□□□ -0.47
BRPF3-206ENST00000449261 TMEM62Q0P6H9 643 aa12.09□□□□□ -0.47
BRPF3-206ENST00000449261 ERO1BQ86YB8 467 aa12.09□□□□□ -0.47
BRPF3-206ENST00000449261 AFG1LQ8WV93 481 aa12.09□□□□□ -0.47
BRPF3-206ENST00000449261 GPRASP2Q96D09 838 aa12.09□□□□□ -0.47
BRPF3-206ENST00000449261 VPS39Q96JC1 886 aa12.09□□□□□ -0.47
BRPF3-206ENST00000449261 NRDE2Q9H7Z3 1164 aa12.09□□□□□ -0.47
BRPF3-206ENST00000449261 VWDEQ8N2E2 1590 aa12.09□□□□□ -0.47
BRPF3-206ENST00000449261 SLC37A4O43826 429 aa12.09□□□□□ -0.47
BRPF3-206ENST00000449261 HNRNPH1P31943 449 aaKnown RBP12.09□□□□□ -0.47
BRPF3-206ENST00000449261 CFAP61Q8NHU2 1237 aa12.09□□□□□ -0.47
BRPF3-206ENST00000449261 SPATA17Q96L03 361 aa12.09□□□□□ -0.47
BRPF3-206ENST00000449261 NUDT12Q9BQG2 462 aa12.09□□□□□ -0.47
BRPF3-206ENST00000449261 DHX35Q9H5Z1 703 aaKnown RBP12.09□□□□□ -0.47
BRPF3-206ENST00000449261 ADARB2Q9NS39 739 aaKnown RBP12.09□□□□□ -0.47
BRPF3-206ENST00000449261 HDAC6Q9UBN7 1215 aa12.09□□□□□ -0.47
BRPF3-206ENST00000449261 TSC22D4Q9Y3Q8 395 aa12.09□□□□□ -0.47
BRPF3-206ENST00000449261 PNMA6AP0CW24 399 aaPredicted RBP12.09□□□□□ -0.47
BRPF3-206ENST00000449261 FOSL1P15407 271 aa12.09□□□□□ -0.47
BRPF3-206ENST00000449261 MMEL1Q495T6 779 aa12.09□□□□□ -0.47
BRPF3-206ENST00000449261 IER5Q5VY09 327 aa12.09□□□□□ -0.47
BRPF3-206ENST00000449261 DEPDC1BQ8WUY9 529 aa12.09□□□□□ -0.47
BRPF3-206ENST00000449261 POLR3CQ9BUI4 534 aaPredicted RBP12.09□□□□□ -0.47
BRPF3-206ENST00000449261 TMX2Q9Y320 296 aa12.09□□□□□ -0.47
BRPF3-206ENST00000449261 MOCS2O96007 188 aaPredicted RBP12.08□□□□□ -0.47
BRPF3-206ENST00000449261 RECQLP46063 649 aaPredicted RBP12.08□□□□□ -0.47
BRPF3-206ENST00000449261 EFHC2Q5JST6 749 aa12.08□□□□□ -0.47
BRPF3-206ENST00000449261 GNASQ5JWF2 1037 aa12.08□□□□□ -0.47
BRPF3-206ENST00000449261 C6orf118Q5T5N4 469 aa12.08□□□□□ -0.47
BRPF3-206ENST00000449261 RASIP1Q5U651 963 aa12.08□□□□□ -0.47
BRPF3-206ENST00000449261 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.08□□□□□ -0.478e-7■■□□□ 14.4
BRPF3-206ENST00000449261 WNT8AQ9H1J5 351 aa12.08□□□□□ -0.47
BRPF3-206ENST00000449261 SYNPO2Q9UMS6 1093 aa12.08□□□□□ -0.47
BRPF3-206ENST00000449261 COL3A1P02461 1466 aaPredicted RBP12.08□□□□□ -0.48
BRPF3-206ENST00000449261 SALL3Q9BXA9 1300 aa12.08□□□□□ -0.48
BRPF3-206ENST00000449261 IQANK1A0A1B0GTG1 560 aa12.08□□□□□ -0.48
BRPF3-206ENST00000449261 KRT37O76014 449 aa12.08□□□□□ -0.48
BRPF3-206ENST00000449261 NR1D1P20393 614 aa12.08□□□□□ -0.48
BRPF3-206ENST00000449261 TMEM132DQ14C87 1099 aa12.08□□□□□ -0.48
BRPF3-206ENST00000449261 NBPF12Q5TAG4 269 aaPredicted RBP12.08□□□□□ -0.48
BRPF3-206ENST00000449261 JADE1Q6IE81 842 aa12.08□□□□□ -0.48
BRPF3-206ENST00000449261 TRIM59Q8IWR1 403 aa12.08□□□□□ -0.48
BRPF3-206ENST00000449261 RDM1Q8NG50 284 aa12.08□□□□□ -0.48
BRPF3-206ENST00000449261 PARD3BQ8TEW8 1205 aa12.08□□□□□ -0.48
BRPF3-206ENST00000449261 RAB3IPQ96QF0 476 aaPredicted RBP12.08□□□□□ -0.48
BRPF3-206ENST00000449261 TARS2Q9BW92 718 aaKnown RBP12.08□□□□□ -0.48
BRPF3-206ENST00000449261 SIK2Q9H0K1 926 aa12.08□□□□□ -0.48
BRPF3-206ENST00000449261 CNOT10Q9H9A5 744 aaKnown RBP12.08□□□□□ -0.48
BRPF3-206ENST00000449261 CYP26B1Q9NR63 512 aa12.08□□□□□ -0.48
BRPF3-206ENST00000449261 PARVAQ9NVD7 372 aa12.08□□□□□ -0.48
BRPF3-206ENST00000449261 RGL2O15211 777 aa12.08□□□□□ -0.48
BRPF3-206ENST00000449261 TOM1L1O75674 476 aa12.08□□□□□ -0.48
BRPF3-206ENST00000449261 CYP11B2P19099 503 aa12.08□□□□□ -0.48
BRPF3-206ENST00000449261 FXR1P51114 621 aaKnown RBP eCLIP12.08□□□□□ -0.48
BRPF3-206ENST00000449261 NME3Q13232 169 aa12.08□□□□□ -0.48
BRPF3-206ENST00000449261 SLC18A3Q16572 532 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms