RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 MARK3P27448 753 aa9.38□□□□□ -0.91
NIPBL-202ENST00000448238 HEATR6Q6AI08 1181 aaKnown RBP9.38□□□□□ -0.91
NIPBL-202ENST00000448238 RAB11FIP2Q7L804 512 aa9.38□□□□□ -0.91
NIPBL-202ENST00000448238 ZNF438Q7Z4V0 828 aa9.38□□□□□ -0.91
NIPBL-202ENST00000448238 DGKHQ86XP1 1220 aa9.38□□□□□ -0.91
NIPBL-202ENST00000448238 ZBTB38Q8NAP3 1195 aaPredicted RBP9.38□□□□□ -0.91
NIPBL-202ENST00000448238 SLC9A6Q92581 669 aa9.38□□□□□ -0.91
NIPBL-202ENST00000448238 VTI1BQ9UEU0 232 aa9.38□□□□□ -0.91
NIPBL-202ENST00000448238 NPR3P17342 541 aa9.38□□□□□ -0.91
NIPBL-202ENST00000448238 SERPINB12Q96P63 405 aa9.38□□□□□ -0.91
NIPBL-202ENST00000448238 CHCHD6Q9BRQ6 235 aa9.38□□□□□ -0.91
NIPBL-202ENST00000448238 PSTPIP2Q9H939 334 aa9.38□□□□□ -0.91
NIPBL-202ENST00000448238 TAP1Q03518 808 aa9.38□□□□□ -0.91
NIPBL-202ENST00000448238 OLFML2AQ68BL7 652 aa9.38□□□□□ -0.91
NIPBL-202ENST00000448238 SCARA3Q6AZY7 606 aa9.38□□□□□ -0.91
NIPBL-202ENST00000448238 TRPV3Q8NET8 790 aa9.38□□□□□ -0.91
NIPBL-202ENST00000448238 FICDQ9BVA6 458 aa9.38□□□□□ -0.91
NIPBL-202ENST00000448238 DLGAP2Q9P1A6 1054 aa9.38□□□□□ -0.91
NIPBL-202ENST00000448238 CDYLQ9Y232 598 aa9.38□□□□□ -0.91
NIPBL-202ENST00000448238 TRIM49BA6NDI0 452 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 TRIM49D1C9J1S8 452 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 IKBKBO14920 756 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 TNFRSF21O75509 655 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 SASH1O94885 1247 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 CCNCP24863 283 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 RPS7P62081 194 aaKnown RBP9.37□□□□□ -0.91
NIPBL-202ENST00000448238 S100A12P80511 92 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 DDR2Q16832 855 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 TSHZ3Q63HK5 1081 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 ZCCHC8Q6NZY4 707 aaKnown RBP9.37□□□□□ -0.91
NIPBL-202ENST00000448238 CCDC33Q8N5R6 958 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 TMIEQ8NEW7 156 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 NGLY1Q96IV0 654 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 ACCSQ96QU6 501 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 SLC13A1Q9BZW2 595 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 POLR1BQ9H9Y6 1135 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 BTBD7Q9P203 1132 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 FAM153AQ9UHL3 310 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 HUS1O60921 280 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 KRT34O76011 436 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 CLTBP09497 229 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 OSBPP22059 807 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 RAD23AP54725 363 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 SFSWAPQ12872 951 aaKnown RBP9.37□□□□□ -0.91
NIPBL-202ENST00000448238 ZNF846Q147U1 533 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 PTPROQ16827 1216 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 C1orf189Q5VU69 101 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 NEK5Q6P3R8 708 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 SNIP1Q8TAD8 396 aaKnown RBP9.37□□□□□ -0.91
NIPBL-202ENST00000448238 RANBP17Q9H2T7 1088 aaKnown RBP9.37□□□□□ -0.91
NIPBL-202ENST00000448238 AKAP7Q9P0M2 348 aaPredicted RBP9.37□□□□□ -0.91
NIPBL-202ENST00000448238 AKT3Q9Y243 479 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 TRIM43BA6NCK2 446 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 POLR2MP0CAP2 368 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 ENO3P13929 434 aaPredicted RBP9.37□□□□□ -0.91
NIPBL-202ENST00000448238 HPGDP15428 266 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 KPNA1P52294 538 aaPredicted RBP9.37□□□□□ -0.91
NIPBL-202ENST00000448238 ATP8B2P98198 1209 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 C2orf54Q08AI8 447 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 TFCP2Q12800 502 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 OLFML1Q6UWY5 402 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 PIK3C3Q8NEB9 887 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 GATAD2BQ8WXI9 593 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 HPS1Q92902 700 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 YIPF2Q9BWQ6 316 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 CHMP1AQ9HD42 196 aaPredicted RBP9.37□□□□□ -0.91
NIPBL-202ENST00000448238 ZFATQ9P243 1243 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 NIP7Q9Y221 180 aaKnown RBP eCLIP9.37□□□□□ -0.91
NIPBL-202ENST00000448238 MTO1Q9Y2Z2 717 aaKnown RBP9.37□□□□□ -0.91
NIPBL-202ENST00000448238 ZNF879B4DU55 563 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 NCAM1P13591 858 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 CCDC153Q494R4 210 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 LRRC24Q50LG9 513 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 OTUD7BQ6GQQ9 843 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 TRIM72Q6ZMU5 477 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 SPICE1Q8N0Z3 855 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 APPBP2Q92624 585 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 RBM17Q96I25 401 aaKnown RBP9.37□□□□□ -0.91
NIPBL-202ENST00000448238 ZC3H10Q96K80 434 aaKnown RBP9.37□□□□□ -0.91
NIPBL-202ENST00000448238 PALD1Q9ULE6 856 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 GSAPA4D1B5 854 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 B4E1Z4 1266 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 PNMA6AP0CW24 399 aaPredicted RBP9.37□□□□□ -0.91
NIPBL-202ENST00000448238 PCP11498 1178 aaKnown RBP9.37□□□□□ -0.91
NIPBL-202ENST00000448238 KDSRQ06136 332 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 GPATCH4Q5T3I0 446 aaKnown RBP9.37□□□□□ -0.91
NIPBL-202ENST00000448238 CDK20Q8IZL9 346 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 C7orf25Q9BPX7 421 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 ADD3Q9UEY8 706 aaKnown RBP9.37□□□□□ -0.91
NIPBL-202ENST00000448238 GSTK1Q9Y2Q3 226 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 POGZQ7Z3K3 1410 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 PDS5AQ29RF7 1337 aaKnown RBP9.37□□□□□ -0.91
NIPBL-202ENST00000448238 RGS10O43665 173 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 BNIP3LO60238 219 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 MGRN1O60291 552 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 GTF2E2P29084 291 aaKnown RBP9.37□□□□□ -0.91
NIPBL-202ENST00000448238 ITGADQ13349 1161 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 SWI5Q1ZZU3 235 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 LRRN2O75325 713 aa9.37□□□□□ -0.91
NIPBL-202ENST00000448238 KHDRBS3O75525 346 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms