RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 RAD51CO43502 376 aa8.21□□□□□ -1.1
NEDD9-204ENST00000448183 CARSP49589 748 aaKnown RBP8.21□□□□□ -1.1
NEDD9-204ENST00000448183 LBRQ14739 615 aaKnown RBP8.21□□□□□ -1.1
NEDD9-204ENST00000448183 EPHA7Q15375 998 aa8.21□□□□□ -1.1
NEDD9-204ENST00000448183 CCDC92Q53HC0 331 aaPredicted RBP8.21□□□□□ -1.1
NEDD9-204ENST00000448183 TMEM154Q6P9G4 183 aa8.21□□□□□ -1.1
NEDD9-204ENST00000448183 JAMLQ86YT9 394 aa8.21□□□□□ -1.1
NEDD9-204ENST00000448183 DDIASQ8IXT1 998 aa8.21□□□□□ -1.1
NEDD9-204ENST00000448183 KIRREL3Q8IZU9 778 aa8.21□□□□□ -1.1
NEDD9-204ENST00000448183 C4orf33Q8N1A6 199 aa8.21□□□□□ -1.1
NEDD9-204ENST00000448183 TMCO5AQ8N6Q1 288 aa8.21□□□□□ -1.1
NEDD9-204ENST00000448183 CCDC134Q9H6E4 229 aa8.21□□□□□ -1.1
NEDD9-204ENST00000448183 RUBCNLQ9H714 662 aa8.21□□□□□ -1.1
NEDD9-204ENST00000448183 APEX2Q9UBZ4 518 aa8.21□□□□□ -1.1
NEDD9-204ENST00000448183 PALLDQ8WX93 1383 aa8.21□□□□□ -1.1
NEDD9-204ENST00000448183 ROBO2Q9HCK4 1378 aa8.21□□□□□ -1.1
NEDD9-204ENST00000448183 TMEM120BA0PK00 339 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 E5RI56 91 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 F5H423 210 aaPredicted RBP8.2□□□□□ -1.1
NEDD9-204ENST00000448183 APOL1O14791 398 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 ESRRBO95718 433 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 KCNA2P16389 499 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 MAP4P27816 1152 aaKnown RBP8.2□□□□□ -1.1
NEDD9-204ENST00000448183 TRADDQ15628 312 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 PTGISQ16647 500 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 DUOXA2Q1HG44 320 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 P3H1Q32P28 736 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 LRRC8BQ6P9F7 803 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 POTEAQ6S8J7 498 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 RNF135Q8IUD6 432 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 THEM5Q8N1Q8 247 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 MRPL4Q9BYD3 311 aaKnown RBP8.2□□□□□ -1.1
NEDD9-204ENST00000448183 ISCUQ9H1K1 167 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 EML4Q9HC35 981 aaKnown RBP8.2□□□□□ -1.1
NEDD9-204ENST00000448183 GABBR1Q9UBS5 961 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 AGO2Q9UKV8 859 aaKnown RBP8.2□□□□□ -1.1
NEDD9-204ENST00000448183 C16orf96A6NNT2 1141 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 ZBTB22O15209 634 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 GYPCP04921 128 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 SERPINB9P50453 376 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 ABCE1P61221 599 aaKnown RBP8.2□□□□□ -1.1
NEDD9-204ENST00000448183 MRPS15P82914 257 aaKnown RBP8.2□□□□□ -1.1
NEDD9-204ENST00000448183 TRIP10Q15642 601 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 LRRC36Q1X8D7 754 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 KIAA2013Q8IYS2 634 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 ADGRF4Q8IZF3 695 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 SRBD1Q8N5C6 995 aaKnown RBP8.2□□□□□ -1.1
NEDD9-204ENST00000448183 EME1Q96AY2 570 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 SLC40A1Q9NP59 571 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 NEU2Q9Y3R4 380 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 CPDO75976 1380 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 F5H6K3 240 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 ANGPT2O15123 496 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 SUPT3HO75486 399 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 KLHL2O95198 593 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 HLA-DPA1P20036 260 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 NMT1P30419 496 aaKnown RBP8.2□□□□□ -1.1
NEDD9-204ENST00000448183 CRKP46108 304 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 CACNB3P54284 484 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 KLRC3Q07444 240 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 TBCCQ15814 346 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 SZRD1Q7Z422 152 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 PDCD6IPQ8WUM4 868 aaKnown RBP8.2□□□□□ -1.1
NEDD9-204ENST00000448183 LZICQ8WZA0 190 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 SEPT8Q92599 483 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 HPS3Q969F9 1004 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 GPR101Q96P66 508 aaPredicted RBP8.2□□□□□ -1.1
NEDD9-204ENST00000448183 EGFL8Q99944 293 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 THTPAQ9BU02 230 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 PHF20Q9BVI0 1012 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 CD209Q9NNX6 404 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 SARS2Q9NP81 518 aaKnown RBP8.2□□□□□ -1.1
NEDD9-204ENST00000448183 TBC1D23Q9NUY8 699 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 IRAK4Q9NWZ3 460 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 MTO1Q9Y2Z2 717 aaKnown RBP8.2□□□□□ -1.1
NEDD9-204ENST00000448183 MROH7-TTC4A0A0A0MT08 1334 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 ADGRL3Q9HAR2 1447 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 SEC24DO94855 1032 aaPredicted RBP8.2□□□□□ -1.1
NEDD9-204ENST00000448183 PYGLP06737 847 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 SESN2P58004 480 aaPredicted RBP8.2□□□□□ -1.1
NEDD9-204ENST00000448183 STK4Q13043 487 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 EDRF1Q3B7T1 1238 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 SWSAP1Q6NVH7 229 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 ARHGAP27Q6ZUM4 889 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 MARCH10Q8NA82 808 aaPredicted RBP8.2□□□□□ -1.1
NEDD9-204ENST00000448183 USP38Q8NB14 1042 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 ERP44Q9BS26 406 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 POLR3FQ9H1D9 316 aaPredicted RBP8.2□□□□□ -1.1
NEDD9-204ENST00000448183 ASCC2Q9H1I8 757 aaPredicted RBP8.2□□□□□ -1.1
NEDD9-204ENST00000448183 L2HGDHQ9H9P8 463 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 ZNF302Q9NR11 478 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 MRGBPQ9NV56 204 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 ZC3H7BQ9UGR2 993 aaKnown RBP8.2□□□□□ -1.1
NEDD9-204ENST00000448183 SRP68Q9UHB9 627 aaKnown RBP8.2□□□□□ -1.1
NEDD9-204ENST00000448183 PAIP2BQ9ULR5 123 aaKnown RBP8.2□□□□□ -1.1
NEDD9-204ENST00000448183 LZTS1Q9Y250 596 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 TMEM94Q12767 1356 aa8.2□□□□□ -1.1
NEDD9-204ENST00000448183 A0A1W2PQJ5 194 aa8.19□□□□□ -1.1
NEDD9-204ENST00000448183 B2RBV5 119 aa8.19□□□□□ -1.1
NEDD9-204ENST00000448183 KIAA0391O15091 583 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms