RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 MED15Q96RN5 788 aa8.23□□□□□ -1.09
AC004540.1-206ENST00000448056 FUCA2Q9BTY2 467 aa8.23□□□□□ -1.09
AC004540.1-206ENST00000448056 MSTO1Q9BUK6 570 aa8.23□□□□□ -1.09
AC004540.1-206ENST00000448056 GZF1Q9H116 711 aaPredicted RBP8.23□□□□□ -1.09
AC004540.1-206ENST00000448056 NXF3Q9H4D5 531 aaKnown RBP8.23□□□□□ -1.09
AC004540.1-206ENST00000448056 TMEM161AQ9NX61 479 aa8.23□□□□□ -1.09
AC004540.1-206ENST00000448056 HSPBP1Q9NZL4 362 aa8.23□□□□□ -1.09
AC004540.1-206ENST00000448056 DACH1Q9UI36 760 aa8.23□□□□□ -1.09
AC004540.1-206ENST00000448056 RWDD2AQ9UIY3 292 aa8.23□□□□□ -1.09
AC004540.1-206ENST00000448056 AGO2Q9UKV8 859 aaKnown RBP8.23□□□□□ -1.09
AC004540.1-206ENST00000448056 HES2Q9Y543 173 aa8.23□□□□□ -1.09
AC004540.1-206ENST00000448056 TET1Q8NFU7 2136 aa8.23□□□□□ -1.09
AC004540.1-206ENST00000448056 SCN5AQ14524 2016 aa8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 SIP14410 1827 aa8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 BICDL2A1A5D9 508 aa8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 GOLGA8IPA6NC78 632 aa8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 TRIM49BA6NDI0 452 aa8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 GOLGA8JA6NMD2 632 aa8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 MEIS3P2A8K0S8 358 aa8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 ZBBXA8MT70 800 aa8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 EXTL3O43909 919 aa8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 OFD1O75665 1012 aa8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 UPP2O95045 317 aa8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 LDHAP00338 332 aaKnown RBP8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 NR3C1P04150 777 aa8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 CLTAP09496 248 aa8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 HARSP12081 509 aaKnown RBP8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 ITGA4P13612 1032 aa8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 ATF7P17544 494 aaPredicted RBP8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 IBSPP21815 317 aaPredicted RBP8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 AKAP5P24588 427 aa8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 RPL13P26373 211 aaKnown RBP8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 TNFSF9P41273 254 aa8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 KCNJ6P48051 423 aa8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 ACOT2P49753 483 aa8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 CYP2J2P51589 502 aa8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 STX17P56962 302 aa8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 OSTNP61366 133 aa8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 DEFB103AP81534 67 aa8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 FKBP3Q00688 224 aaKnown RBP8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 POU5F1Q01860 360 aaKnown RBP8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 SEZ6Q53EL9 994 aa8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 ZBTB41Q5SVQ8 909 aa8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 TTI2Q6NXR4 508 aa8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 FOXR2Q6PJQ5 311 aa8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 CRELD2Q6UXH1 353 aaPredicted RBP8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 ALKAL1Q6UXT8 129 aa8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 AGMOQ6ZNB7 445 aa8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 NPAS4Q8IUM7 802 aa8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 TMEM192Q8IY95 271 aa8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 HACE1Q8IYU2 909 aa8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 CEP120Q8N960 986 aa8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 XXYLT1Q8NBI6 393 aa8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 RNF169Q8NCN4 708 aa8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 PHOSPHO2Q8TCD6 241 aa8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 LPPQ93052 612 aa8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 SAAL1Q96ER3 474 aa8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 FBXL18Q96ME1 805 aa8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 ACAP3Q96P50 834 aa8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 TSG101Q99816 390 aa8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 DUSP9Q99956 384 aaKnown RBP8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 FAM213AQ9BRX8 229 aa8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 CCDC94Q9BW85 323 aaPredicted RBP8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 MTIF3Q9H2K0 278 aaKnown RBP8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 KIAA1586Q9HCI6 787 aa8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 UBN1Q9NPG3 1134 aa8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 SNTG2Q9NY99 539 aa8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 PARP2Q9UGN5 583 aa8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 CPSF3Q9UKF6 684 aaKnown RBP8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 LRFN2Q9ULH4 789 aa8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 CTNND2Q9UQB3 1225 aa8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 GIT1Q9Y2X7 761 aa8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 SLC4A7Q9Y6M7 1214 aa8.22□□□□□ -1.09
AC004540.1-206ENST00000448056 TANC1Q9C0D5 1861 aa8.21□□□□□ -1.09
AC004540.1-206ENST00000448056 ZNF233A6NK53 670 aa8.21□□□□□ -1.1
AC004540.1-206ENST00000448056 GOLGA8CPA6NN73 597 aa8.21□□□□□ -1.1
AC004540.1-206ENST00000448056 CETN3O15182 167 aa8.21□□□□□ -1.1
AC004540.1-206ENST00000448056 MEFVO15553 781 aaPredicted RBP8.21□□□□□ -1.1
AC004540.1-206ENST00000448056 EXOC3O60645 756 aa8.21□□□□□ -1.1
AC004540.1-206ENST00000448056 DGKIO75912 1065 aa8.21□□□□□ -1.1
AC004540.1-206ENST00000448056 ADRB2P07550 413 aa8.21□□□□□ -1.1
AC004540.1-206ENST00000448056 FGFR1P11362 822 aa8.21□□□□□ -1.1
AC004540.1-206ENST00000448056 ATP2A2P16615 1042 aaKnown RBP8.21□□□□□ -1.1
AC004540.1-206ENST00000448056 NR2F2P24468 414 aa8.21□□□□□ -1.1
AC004540.1-206ENST00000448056 YARSP54577 528 aaKnown RBP8.21□□□□□ -1.1
AC004540.1-206ENST00000448056 HSP90AA2PQ14568 343 aaPredicted RBP8.21□□□□□ -1.1
AC004540.1-206ENST00000448056 ENOX2Q16206 610 aaKnown RBP8.21□□□□□ -1.1
AC004540.1-206ENST00000448056 SLC10A6Q3KNW5 377 aa8.21□□□□□ -1.1
AC004540.1-206ENST00000448056 ANO6Q4KMQ2 910 aa8.21□□□□□ -1.1
AC004540.1-206ENST00000448056 XKR4Q5GH76 650 aa8.21□□□□□ -1.1
AC004540.1-206ENST00000448056 C11orf57Q6ZUT1 292 aaPredicted RBP8.21□□□□□ -1.1
AC004540.1-206ENST00000448056 TMCO2Q7Z6W1 182 aaPredicted RBP8.21□□□□□ -1.1
AC004540.1-206ENST00000448056 CBWD2Q8IUF1 395 aa8.21□□□□□ -1.1
AC004540.1-206ENST00000448056 ZC3H3Q8IXZ2 948 aaKnown RBP8.21□□□□□ -1.1
AC004540.1-206ENST00000448056 GPD1LQ8N335 351 aa8.21□□□□□ -1.1
AC004540.1-206ENST00000448056 CSGALNACT2Q8N6G5 542 aa8.21□□□□□ -1.1
AC004540.1-206ENST00000448056 RDH13Q8NBN7 331 aa8.21□□□□□ -1.1
AC004540.1-206ENST00000448056 ENOX1Q8TC92 643 aaKnown RBP8.21□□□□□ -1.1
AC004540.1-206ENST00000448056 EEF2KMTQ96G04 330 aa8.21□□□□□ -1.1
AC004540.1-206ENST00000448056 RNPC3Q96LT9 517 aaKnown RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms