RNA–Protein interactions for RNA: ENST00000447683.2

OTUB1-204, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 2

Gene OTUB1, Length 2,315 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-204ENST00000447683 TTI1O43156 1089 aa17.48■□□□□ 0.39
OTUB1-204ENST00000447683 SHOX2O60902 331 aaPredicted RBP17.48■□□□□ 0.39
OTUB1-204ENST00000447683 STRN3Q13033 797 aa17.48■□□□□ 0.39
OTUB1-204ENST00000447683 ZACNQ401N2 412 aa17.48■□□□□ 0.39
OTUB1-204ENST00000447683 SEPT14Q6ZU15 432 aa17.48■□□□□ 0.39
OTUB1-204ENST00000447683 DDX42Q86XP3 938 aaKnown RBP eCLIP17.48■□□□□ 0.39
OTUB1-204ENST00000447683 UBL4BQ8N7F7 174 aa17.48■□□□□ 0.39
OTUB1-204ENST00000447683 PROCA1Q8NCQ7 364 aaPredicted RBP17.48■□□□□ 0.39
OTUB1-204ENST00000447683 DHX38Q92620 1227 aaKnown RBP17.48■□□□□ 0.39
OTUB1-204ENST00000447683 CD101Q93033 1021 aa17.48■□□□□ 0.39
OTUB1-204ENST00000447683 GSTTP1A0A1W2PQM5 241 aa17.48■□□□□ 0.39
OTUB1-204ENST00000447683 COMTP21964 271 aa17.48■□□□□ 0.39
OTUB1-204ENST00000447683 UBA1P22314 1058 aaKnown RBP17.48■□□□□ 0.39
OTUB1-204ENST00000447683 PEX5P50542 639 aa17.48■□□□□ 0.39
OTUB1-204ENST00000447683 ZNF211Q13398 564 aaPredicted RBP17.48■□□□□ 0.39
OTUB1-204ENST00000447683 TARBP2Q15633 366 aaKnown RBP17.48■□□□□ 0.39
OTUB1-204ENST00000447683 ACAD10Q6JQN1 1059 aa17.48■□□□□ 0.39
OTUB1-204ENST00000447683 SUGP1Q8IWZ8 645 aaKnown RBP17.48■□□□□ 0.39
OTUB1-204ENST00000447683 C1orf131Q8NDD1 294 aaKnown RBP17.48■□□□□ 0.39
OTUB1-204ENST00000447683 PCYT2Q99447 389 aa17.48■□□□□ 0.39
OTUB1-204ENST00000447683 WNT8AQ9H1J5 351 aa17.48■□□□□ 0.39
OTUB1-204ENST00000447683 NEUROG2Q9H2A3 272 aa17.48■□□□□ 0.39
OTUB1-204ENST00000447683 UVRAGQ9P2Y5 699 aa17.48■□□□□ 0.39
OTUB1-204ENST00000447683 AGO2Q9UKV8 859 aaKnown RBP17.48■□□□□ 0.39
OTUB1-204ENST00000447683 TRPC6Q9Y210 931 aa17.48■□□□□ 0.39
OTUB1-204ENST00000447683 GOLGA6L10A0A0M3HER8 536 aa17.47■□□□□ 0.39
OTUB1-204ENST00000447683 FARP2O94887 1054 aaPredicted RBP17.47■□□□□ 0.39
OTUB1-204ENST00000447683 C4BPAP04003 597 aaKnown RBP17.47■□□□□ 0.39
OTUB1-204ENST00000447683 HSPA6P17066 643 aa17.47■□□□□ 0.39
OTUB1-204ENST00000447683 MESDQ14696 234 aa17.47■□□□□ 0.39
OTUB1-204ENST00000447683 SLFN12LQ6IEE8 588 aa17.47■□□□□ 0.39
OTUB1-204ENST00000447683 CRELD2Q6UXH1 353 aaPredicted RBP17.47■□□□□ 0.39
OTUB1-204ENST00000447683 KRT35Q92764 455 aa17.47■□□□□ 0.39
OTUB1-204ENST00000447683 PI4K2AQ9BTU6 479 aa17.47■□□□□ 0.39
OTUB1-204ENST00000447683 CELF4Q9BZC1 486 aaKnown RBP17.47■□□□□ 0.39
OTUB1-204ENST00000447683 HAPLN2Q9GZV7 340 aa17.47■□□□□ 0.39
OTUB1-204ENST00000447683 FAM114A2Q9NRY5 505 aa17.47■□□□□ 0.39
OTUB1-204ENST00000447683 SOWAHBA6NEL2 793 aa17.47■□□□□ 0.39
OTUB1-204ENST00000447683 DAPK3O43293 454 aa17.47■□□□□ 0.39
OTUB1-204ENST00000447683 ATMINO43313 823 aaPredicted RBP17.47■□□□□ 0.39
OTUB1-204ENST00000447683 PEX10O60683 326 aa17.47■□□□□ 0.39
OTUB1-204ENST00000447683 RFC5P40937 340 aa17.47■□□□□ 0.39
OTUB1-204ENST00000447683 NLRP11P59045 1033 aaKnown RBP17.47■□□□□ 0.39
OTUB1-204ENST00000447683 NAA35Q5VZE5 725 aa17.47■□□□□ 0.39
OTUB1-204ENST00000447683 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.47■□□□□ 0.39
OTUB1-204ENST00000447683 DEPTORQ8TB45 409 aa17.47■□□□□ 0.39
OTUB1-204ENST00000447683 ZNF564Q8TBZ8 553 aaPredicted RBP17.47■□□□□ 0.39
OTUB1-204ENST00000447683 LRRC45Q96CN5 670 aa17.47■□□□□ 0.39
OTUB1-204ENST00000447683 NUP85Q9BW27 656 aa17.47■□□□□ 0.39
OTUB1-204ENST00000447683 ERVK-5Q9HDB9 667 aa17.47■□□□□ 0.39
OTUB1-204ENST00000447683 C1orf112Q9NSG2 853 aa17.47■□□□□ 0.39
OTUB1-204ENST00000447683 UTP11Q9Y3A2 253 aaKnown RBP17.47■□□□□ 0.39
OTUB1-204ENST00000447683 K7ERI5 159 aa17.46■□□□□ 0.39
OTUB1-204ENST00000447683 TULP1O00294 542 aaPredicted RBP17.46■□□□□ 0.39
OTUB1-204ENST00000447683 MARCKSL1P49006 195 aa17.46■□□□□ 0.39
OTUB1-204ENST00000447683 WNT7BP56706 349 aa17.46■□□□□ 0.39
OTUB1-204ENST00000447683 CLEC16AQ2KHT3 1053 aa17.46■□□□□ 0.39
OTUB1-204ENST00000447683 LRRC31Q6UY01 552 aa17.46■□□□□ 0.39
OTUB1-204ENST00000447683 SLC7A3Q8WY07 619 aa17.46■□□□□ 0.39
OTUB1-204ENST00000447683 ELMO3Q96BJ8 720 aa17.46■□□□□ 0.39
OTUB1-204ENST00000447683 ZNF653Q96CK0 615 aa17.46■□□□□ 0.39
OTUB1-204ENST00000447683 FNBP1Q96RU3 617 aa17.46■□□□□ 0.39
OTUB1-204ENST00000447683 SPATC1LQ9H0A9 340 aa17.46■□□□□ 0.39
OTUB1-204ENST00000447683 TMEM134Q9H6X4 195 aa17.46■□□□□ 0.39
OTUB1-204ENST00000447683 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.46■□□□□ 0.39
OTUB1-204ENST00000447683 CHORDC1Q9UHD1 332 aaPredicted RBP17.46■□□□□ 0.39
OTUB1-204ENST00000447683 FAM187AA6NFU0 413 aa17.46■□□□□ 0.38
OTUB1-204ENST00000447683 TMEM110-MUSTN1A8MSY1 372 aa17.46■□□□□ 0.38
OTUB1-204ENST00000447683 GGPS1O95749 300 aa17.46■□□□□ 0.38
OTUB1-204ENST00000447683 KRT14P02533 472 aa17.46■□□□□ 0.38
OTUB1-204ENST00000447683 CTNNA2P26232 953 aa17.46■□□□□ 0.38
OTUB1-204ENST00000447683 LRIG3Q6UXM1 1119 aa17.46■□□□□ 0.38
OTUB1-204ENST00000447683 FAM84AQ96KN4 292 aa17.46■□□□□ 0.38
OTUB1-204ENST00000447683 RAB17Q9H0T7 212 aa17.46■□□□□ 0.38
OTUB1-204ENST00000447683 LRRIQ4A6NIV6 560 aa17.45■□□□□ 0.38
OTUB1-204ENST00000447683 LDHAP00338 332 aaKnown RBP17.45■□□□□ 0.38
OTUB1-204ENST00000447683 HLA-DRAP01903 254 aa17.45■□□□□ 0.38
OTUB1-204ENST00000447683 TGFB3P10600 412 aa17.45■□□□□ 0.38
OTUB1-204ENST00000447683 KRT5P13647 590 aa17.45■□□□□ 0.38
OTUB1-204ENST00000447683 SKOR1P84550 965 aa17.45■□□□□ 0.38
OTUB1-204ENST00000447683 DHX34Q14147 1143 aaKnown RBP17.45■□□□□ 0.38
OTUB1-204ENST00000447683 NEDD9Q14511 834 aa17.45■□□□□ 0.38
OTUB1-204ENST00000447683 TDRD10Q5VZ19 366 aaKnown RBP17.45■□□□□ 0.38
OTUB1-204ENST00000447683 DLK2Q6UY11 383 aa17.45■□□□□ 0.38
OTUB1-204ENST00000447683 ZNF677Q86XU0 584 aa17.45■□□□□ 0.38
OTUB1-204ENST00000447683 NRBP2Q9NSY0 501 aa17.45■□□□□ 0.38
OTUB1-204ENST00000447683 CSADQ9Y600 493 aa17.45■□□□□ 0.38
OTUB1-204ENST00000447683 A0A0B4J269 797 aa17.44■□□□□ 0.38
OTUB1-204ENST00000447683 IVLP07476 585 aa17.44■□□□□ 0.38
OTUB1-204ENST00000447683 UNGP13051 313 aaPredicted RBP17.44■□□□□ 0.38
OTUB1-204ENST00000447683 TNNI1P19237 187 aa17.44■□□□□ 0.38
OTUB1-204ENST00000447683 CTNNA1P35221 906 aaKnown RBP17.44■□□□□ 0.38
OTUB1-204ENST00000447683 HSD17B3P37058 310 aa17.44■□□□□ 0.38
OTUB1-204ENST00000447683 ACOT2P49753 483 aa17.44■□□□□ 0.38
OTUB1-204ENST00000447683 UAP1Q16222 522 aaPredicted RBP17.44■□□□□ 0.38
OTUB1-204ENST00000447683 AADACL2Q6P093 401 aa17.44■□□□□ 0.38
OTUB1-204ENST00000447683 SRLQ86TD4 932 aa17.44■□□□□ 0.38
OTUB1-204ENST00000447683 ZBTB45Q96K62 511 aaPredicted RBP17.44■□□□□ 0.38
OTUB1-204ENST00000447683 PLAAQ9Y263 795 aa17.44■□□□□ 0.38
OTUB1-204ENST00000447683 PCDHA3Q9Y5H8 950 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms