RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 COL4A3BPQ9Y5P4 624 aa13.76□□□□□ -0.21
SSR4-205ENST00000447375 C2orf16Q68DN1 1984 aa13.76□□□□□ -0.21
SSR4-205ENST00000447375 SLC26A4O43511 780 aa13.75□□□□□ -0.21
SSR4-205ENST00000447375 RFPL2O75678 378 aa13.75□□□□□ -0.21
SSR4-205ENST00000447375 MYBP10242 640 aa13.75□□□□□ -0.21
SSR4-205ENST00000447375 CYP11B2P19099 503 aa13.75□□□□□ -0.21
SSR4-205ENST00000447375 LONP1P36776 959 aaKnown RBP13.75□□□□□ -0.21
SSR4-205ENST00000447375 PRKCQQ04759 706 aa13.75□□□□□ -0.21
SSR4-205ENST00000447375 POU5F1BQ06416 359 aa13.75□□□□□ -0.21
SSR4-205ENST00000447375 BECN1Q14457 450 aa13.75□□□□□ -0.21
SSR4-205ENST00000447375 MXD4Q14582 209 aaPredicted RBP13.75□□□□□ -0.21
SSR4-205ENST00000447375 SLC39A14Q15043 492 aa13.75□□□□□ -0.21
SSR4-205ENST00000447375 PADI6Q6TGC4 694 aa13.75□□□□□ -0.21
SSR4-205ENST00000447375 GET4Q7L5D6 327 aaPredicted RBP13.75□□□□□ -0.21
SSR4-205ENST00000447375 MCPH1Q8NEM0 835 aa13.75□□□□□ -0.21
SSR4-205ENST00000447375 RSPH1Q8WYR4 309 aa13.75□□□□□ -0.21
SSR4-205ENST00000447375 SCLT1Q96NL6 688 aa13.75□□□□□ -0.21
SSR4-205ENST00000447375 USP28Q96RU2 1077 aa13.75□□□□□ -0.21
SSR4-205ENST00000447375 RPP25Q9BUL9 199 aaKnown RBP13.75□□□□□ -0.21
SSR4-205ENST00000447375 INO80BQ9C086 356 aaPredicted RBP13.75□□□□□ -0.21
SSR4-205ENST00000447375 PIDD1Q9HB75 910 aa13.75□□□□□ -0.21
SSR4-205ENST00000447375 BMP2KQ9NSY1 1161 aaPredicted RBP13.75□□□□□ -0.21
SSR4-205ENST00000447375 DACT1Q9NYF0 836 aa13.75□□□□□ -0.21
SSR4-205ENST00000447375 RAB23Q9ULC3 237 aa13.75□□□□□ -0.21
SSR4-205ENST00000447375 DNM3Q9UQ16 869 aa13.75□□□□□ -0.21
SSR4-205ENST00000447375 SRPRBQ9Y5M8 271 aaKnown RBP13.75□□□□□ -0.21
SSR4-205ENST00000447375 ARHGEF35A5YM69 484 aa13.74□□□□□ -0.21
SSR4-205ENST00000447375 SRGAP2CP0DJJ0 459 aa13.74□□□□□ -0.21
SSR4-205ENST00000447375 SLC11A1P49279 550 aa13.74□□□□□ -0.21
SSR4-205ENST00000447375 NASPP49321 788 aaPredicted RBP13.74□□□□□ -0.21
SSR4-205ENST00000447375 CEBPZQ03701 1054 aaKnown RBP13.74□□□□□ -0.21
SSR4-205ENST00000447375 GRIN1Q05586 938 aa13.74□□□□□ -0.21
SSR4-205ENST00000447375 RNASELQ05823 741 aaKnown RBP13.74□□□□□ -0.21
SSR4-205ENST00000447375 PKP1Q13835 747 aa13.74□□□□□ -0.21
SSR4-205ENST00000447375 MLF2Q15773 248 aaPredicted RBP13.74□□□□□ -0.21
SSR4-205ENST00000447375 SLC44A4Q53GD3 710 aa13.74□□□□□ -0.21
SSR4-205ENST00000447375 DDX1Q92499 740 aaKnown RBP13.74□□□□□ -0.21
SSR4-205ENST00000447375 ZNF707Q96C28 371 aaPredicted RBP13.74□□□□□ -0.21
SSR4-205ENST00000447375 NLRP4Q96MN2 994 aa13.74□□□□□ -0.21
SSR4-205ENST00000447375 PNMA5Q96PV4 448 aa13.74□□□□□ -0.21
SSR4-205ENST00000447375 GBP3Q9H0R5 595 aa13.74□□□□□ -0.21
SSR4-205ENST00000447375 BHMT2Q9H2M3 363 aa13.74□□□□□ -0.21
SSR4-205ENST00000447375 DNAJB4Q9UDY4 337 aa13.74□□□□□ -0.21
SSR4-205ENST00000447375 FBXO2Q9UK22 296 aaPredicted RBP13.74□□□□□ -0.21
SSR4-205ENST00000447375 E9PMD0 336 aa13.73□□□□□ -0.21
SSR4-205ENST00000447375 C2CD2LO14523 706 aa13.73□□□□□ -0.21
SSR4-205ENST00000447375 USO1O60763 962 aaKnown RBP13.73□□□□□ -0.21
SSR4-205ENST00000447375 CSDE1O75534 798 aaKnown RBP13.73□□□□□ -0.21
SSR4-205ENST00000447375 GLUD1P00367 558 aa13.73□□□□□ -0.21
SSR4-205ENST00000447375 F13A1P00488 732 aa13.73□□□□□ -0.21
SSR4-205ENST00000447375 ADH1AP07327 375 aa13.73□□□□□ -0.21
SSR4-205ENST00000447375 FGFR4P22455 802 aa13.73□□□□□ -0.21
SSR4-205ENST00000447375 PMLP29590 882 aa13.73□□□□□ -0.21
SSR4-205ENST00000447375 MARCKSP29966 332 aaPredicted RBP13.73□□□□□ -0.21
SSR4-205ENST00000447375 UBA7P41226 1012 aa13.73□□□□□ -0.21
SSR4-205ENST00000447375 LPAL2Q16609 132 aa13.73□□□□□ -0.21
SSR4-205ENST00000447375 LONRF3Q496Y0 759 aa13.73□□□□□ -0.21
SSR4-205ENST00000447375 TMEM119Q4V9L6 283 aa13.73□□□□□ -0.21
SSR4-205ENST00000447375 NOMO2Q5JPE7 1267 aa13.73□□□□□ -0.21
SSR4-205ENST00000447375 ZBTB41Q5SVQ8 909 aa13.73□□□□□ -0.21
SSR4-205ENST00000447375 N4BP2L1Q5TBK1 243 aaPredicted RBP13.73□□□□□ -0.21
SSR4-205ENST00000447375 FOXD4L5Q5VV16 416 aaPredicted RBP13.73□□□□□ -0.21
SSR4-205ENST00000447375 LAIR1Q6GTX8 287 aa13.73□□□□□ -0.21
SSR4-205ENST00000447375 GLB1LQ6UWU2 654 aa13.73□□□□□ -0.21
SSR4-205ENST00000447375 RSPO2Q6UXX9 243 aaPredicted RBP13.73□□□□□ -0.21
SSR4-205ENST00000447375 KCNK18Q7Z418 384 aa13.73□□□□□ -0.21
SSR4-205ENST00000447375 SRGAP1Q7Z6B7 1085 aa13.73□□□□□ -0.21
SSR4-205ENST00000447375 IFNLR1Q8IU57 520 aaPredicted RBP13.73□□□□□ -0.21
SSR4-205ENST00000447375 RNF149Q8NC42 400 aa13.73□□□□□ -0.21
SSR4-205ENST00000447375 FOXD4L4Q8WXT5 416 aaPredicted RBP13.73□□□□□ -0.21
SSR4-205ENST00000447375 LPPQ93052 612 aa13.73□□□□□ -0.21
SSR4-205ENST00000447375 ZNF396Q96N95 335 aaPredicted RBP13.73□□□□□ -0.21
SSR4-205ENST00000447375 FAM126AQ9BYI3 521 aaPredicted RBP13.73□□□□□ -0.21
SSR4-205ENST00000447375 NT5C3AQ9H0P0 336 aa13.73□□□□□ -0.21
SSR4-205ENST00000447375 LTB4R2Q9NPC1 389 aa13.73□□□□□ -0.21
SSR4-205ENST00000447375 TFIP11Q9UBB9 837 aaKnown RBP13.73□□□□□ -0.21
SSR4-205ENST00000447375 INPP5FQ9Y2H2 1132 aa13.73□□□□□ -0.21
SSR4-205ENST00000447375 TDRD15B5MCY1 1934 aaKnown RBP13.72□□□□□ -0.21
SSR4-205ENST00000447375 TEX28O15482 410 aa13.72□□□□□ -0.21
SSR4-205ENST00000447375 OFD1O75665 1012 aa13.72□□□□□ -0.21
SSR4-205ENST00000447375 ALDH2P05091 517 aa13.72□□□□□ -0.21
SSR4-205ENST00000447375 PROS1P07225 676 aa13.72□□□□□ -0.21
SSR4-205ENST00000447375 CD72P21854 359 aa13.72□□□□□ -0.21
SSR4-205ENST00000447375 SFPQP23246 707 aaKnown RBP eCLIP13.72□□□□□ -0.21
SSR4-205ENST00000447375 GLRA2P23416 452 aa13.72□□□□□ -0.21
SSR4-205ENST00000447375 PHKA2P46019 1235 aa13.72□□□□□ -0.21
SSR4-205ENST00000447375 PTENP60484 403 aa13.72□□□□□ -0.21
SSR4-205ENST00000447375 SHC2P98077 582 aa13.72□□□□□ -0.21
SSR4-205ENST00000447375 TFDP1Q14186 410 aa13.72□□□□□ -0.21
SSR4-205ENST00000447375 ATL3Q6DD88 541 aa13.72□□□□□ -0.21
SSR4-205ENST00000447375 PARM1Q6UWI2 310 aa13.72□□□□□ -0.21
SSR4-205ENST00000447375 MAEAQ7L5Y9 396 aa13.72□□□□□ -0.21
SSR4-205ENST00000447375 ZNF280BQ86YH2 543 aa13.72□□□□□ -0.21
SSR4-205ENST00000447375 CELF5Q8N6W0 485 aaKnown RBP13.72□□□□□ -0.21
SSR4-205ENST00000447375 LINC00301Q8NCQ3 95 aa13.72□□□□□ -0.21
SSR4-205ENST00000447375 ASAP3Q8TDY4 903 aa13.72□□□□□ -0.21
SSR4-205ENST00000447375 FGF14Q92915 247 aa13.72□□□□□ -0.21
SSR4-205ENST00000447375 RPS6KC1Q96S38 1066 aa13.72□□□□□ -0.21
SSR4-205ENST00000447375 NFKBIZQ9BYH8 718 aa13.72□□□□□ -0.21
SSR4-205ENST00000447375 CCSER1Q9C0I3 900 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms