RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 ADGRA3Q8IWK6 1321 aa6.03□□□□□ -1.44
SDCBP-205ENST00000447267 C4orf47A7E2U8 309 aa6.03□□□□□ -1.44
SDCBP-205ENST00000447267 HIDE1A8MVS5 230 aa6.03□□□□□ -1.44
SDCBP-205ENST00000447267 H3BS24 57 aa6.03□□□□□ -1.44
SDCBP-205ENST00000447267 SRGAP2BP0DMP2 458 aa6.03□□□□□ -1.44
SDCBP-205ENST00000447267 CD72P21854 359 aa6.03□□□□□ -1.44
SDCBP-205ENST00000447267 MTHFRP42898 656 aa6.03□□□□□ -1.44
SDCBP-205ENST00000447267 PHKA1P46020 1223 aa6.03□□□□□ -1.44
SDCBP-205ENST00000447267 SFRP5Q5T4F7 317 aa6.03□□□□□ -1.44
SDCBP-205ENST00000447267 PLPP4Q5VZY2 271 aa6.03□□□□□ -1.44
SDCBP-205ENST00000447267 XRRA1Q6P2D8 792 aa6.03□□□□□ -1.44
SDCBP-205ENST00000447267 CILP2Q8IUL8 1156 aa6.03□□□□□ -1.44
SDCBP-205ENST00000447267 HID1Q8IV36 788 aa6.03□□□□□ -1.44
SDCBP-205ENST00000447267 ANKRD35Q8N283 1001 aa6.03□□□□□ -1.44
SDCBP-205ENST00000447267 MFSD4AQ8N468 514 aa6.03□□□□□ -1.44
SDCBP-205ENST00000447267 REPS2Q8NFH8 660 aa6.03□□□□□ -1.44
SDCBP-205ENST00000447267 TMEM40Q8WWA1 233 aa6.03□□□□□ -1.44
SDCBP-205ENST00000447267 CDCA3Q99618 268 aaPredicted RBP6.03□□□□□ -1.44
SDCBP-205ENST00000447267 MYH16Q9H6N6 1097 aa6.03□□□□□ -1.44
SDCBP-205ENST00000447267 PARP2Q9UGN5 583 aa6.03□□□□□ -1.44
SDCBP-205ENST00000447267 TPX2Q9ULW0 747 aaKnown RBP6.03□□□□□ -1.44
SDCBP-205ENST00000447267 CORINQ9Y5Q5 1042 aa6.03□□□□□ -1.44
SDCBP-205ENST00000447267 FRMPD2Q68DX3 1309 aaPredicted RBP6.02□□□□□ -1.45
SDCBP-205ENST00000447267 COL11A1P12107 1806 aaPredicted RBP6.02□□□□□ -1.45
SDCBP-205ENST00000447267 CFAP46Q8IYW2 2715 aa6.02□□□□□ -1.45
SDCBP-205ENST00000447267 CREBBPQ92793 2442 aa6.02□□□□□ -1.45
SDCBP-205ENST00000447267 F6X3S4 739 aa6.02□□□□□ -1.45
SDCBP-205ENST00000447267 CBX7O95931 251 aa6.02□□□□□ -1.45
SDCBP-205ENST00000447267 CFHR1Q03591 330 aa6.02□□□□□ -1.45
SDCBP-205ENST00000447267 ITIH3Q06033 890 aa6.02□□□□□ -1.45
SDCBP-205ENST00000447267 TNK2Q07912 1038 aa6.02□□□□□ -1.45
SDCBP-205ENST00000447267 RBL2Q08999 1139 aa6.02□□□□□ -1.45
SDCBP-205ENST00000447267 SNW1Q13573 536 aaKnown RBP6.02□□□□□ -1.45
SDCBP-205ENST00000447267 UBXN2BQ14CS0 331 aa6.02□□□□□ -1.45
SDCBP-205ENST00000447267 PUM3Q15397 648 aaKnown RBP6.02□□□□□ -1.45
SDCBP-205ENST00000447267 CERKLQ49MI3 558 aaPredicted RBP6.02□□□□□ -1.45
SDCBP-205ENST00000447267 PAN2Q504Q3 1202 aaKnown RBP6.02□□□□□ -1.45
SDCBP-205ENST00000447267 ATAT1Q5SQI0 421 aa6.02□□□□□ -1.45
SDCBP-205ENST00000447267 TCEAL6Q6IPX3 200 aa6.02□□□□□ -1.45
SDCBP-205ENST00000447267 TATDN1Q6P1N9 297 aa6.02□□□□□ -1.45
SDCBP-205ENST00000447267 SND1Q7KZF4 910 aaKnown RBP eCLIP6.02□□□□□ -1.455e-10■■■■□ 20.2
SDCBP-205ENST00000447267 CDH24Q86UP0 819 aa6.02□□□□□ -1.45
SDCBP-205ENST00000447267 ZSWIM9Q86XI8 627 aa6.02□□□□□ -1.45
SDCBP-205ENST00000447267 CPXCR1Q8N123 301 aa6.02□□□□□ -1.45
SDCBP-205ENST00000447267 CHCHD4Q8N4Q1 142 aa6.02□□□□□ -1.45
SDCBP-205ENST00000447267 MFSD2AQ8NA29 543 aa6.02□□□□□ -1.45
SDCBP-205ENST00000447267 PHC3Q8NDX5 983 aa6.02□□□□□ -1.45
SDCBP-205ENST00000447267 OR6J1Q8NGC5 347 aa6.02□□□□□ -1.45
SDCBP-205ENST00000447267 DNAJB8Q8NHS0 232 aa6.02□□□□□ -1.45
SDCBP-205ENST00000447267 SEPT8Q92599 483 aa6.02□□□□□ -1.45
SDCBP-205ENST00000447267 TCEAL3Q969E4 200 aa6.02□□□□□ -1.45
SDCBP-205ENST00000447267 ACSF2Q96CM8 615 aaPredicted RBP6.02□□□□□ -1.45
SDCBP-205ENST00000447267 ZNF689Q96CS4 500 aaPredicted RBP6.02□□□□□ -1.45
SDCBP-205ENST00000447267 LIN37Q96GY3 246 aaPredicted RBP6.02□□□□□ -1.45
SDCBP-205ENST00000447267 CABP5Q9NP86 173 aa6.02□□□□□ -1.45
SDCBP-205ENST00000447267 DENND2AQ9ULE3 1009 aa6.02□□□□□ -1.45
SDCBP-205ENST00000447267 SIPA1L1O43166 1804 aa6.02□□□□□ -1.45
SDCBP-205ENST00000447267 ZNFX1Q9P2E3 1918 aaKnown RBP6.01□□□□□ -1.45
SDCBP-205ENST00000447267 FBN3Q75N90 2809 aa6.01□□□□□ -1.45
SDCBP-205ENST00000447267 RSPH10B2B2RC85 870 aa6.01□□□□□ -1.45
SDCBP-205ENST00000447267 FOXD2O60548 495 aaPredicted RBP6.01□□□□□ -1.45
SDCBP-205ENST00000447267 N4BP1O75113 896 aaKnown RBP6.01□□□□□ -1.45
SDCBP-205ENST00000447267 ZNF806P0C7X5 589 aa6.01□□□□□ -1.45
SDCBP-205ENST00000447267 RSPH10BP0C881 870 aa6.01□□□□□ -1.45
SDCBP-205ENST00000447267 HSPA5P11021 654 aaKnown RBP6.01□□□□□ -1.45
SDCBP-205ENST00000447267 THPOP40225 353 aa6.01□□□□□ -1.45
SDCBP-205ENST00000447267 CPT1AP50416 773 aa6.01□□□□□ -1.45
SDCBP-205ENST00000447267 STARD6P59095 220 aa6.01□□□□□ -1.45
SDCBP-205ENST00000447267 DAB2P98082 770 aa6.01□□□□□ -1.45
SDCBP-205ENST00000447267 PTPN14Q15678 1187 aa6.01□□□□□ -1.45
SDCBP-205ENST00000447267 DUSP28Q4G0W2 176 aa6.01□□□□□ -1.45
SDCBP-205ENST00000447267 NAALADL2Q58DX5 795 aa6.01□□□□□ -1.45
SDCBP-205ENST00000447267 HIST2H2BCQ6DN03 193 aa6.01□□□□□ -1.45
SDCBP-205ENST00000447267 SIAH1Q8IUQ4 282 aa6.01□□□□□ -1.45
SDCBP-205ENST00000447267 MRPL41Q8IXM3 137 aaKnown RBP6.01□□□□□ -1.45
SDCBP-205ENST00000447267 C8orf58Q8NAV2 365 aa6.01□□□□□ -1.45
SDCBP-205ENST00000447267 DEFB124Q8NES8 71 aa6.01□□□□□ -1.45
SDCBP-205ENST00000447267 COPS5Q92905 334 aa6.01□□□□□ -1.45
SDCBP-205ENST00000447267 Q96M66 194 aa6.01□□□□□ -1.45
SDCBP-205ENST00000447267 JADE2Q9NQC1 790 aa6.01□□□□□ -1.45
SDCBP-205ENST00000447267 IGSF9Q9P2J2 1179 aa6.01□□□□□ -1.45
SDCBP-205ENST00000447267 ANKMY1Q9P2S6 941 aa6.01□□□□□ -1.45
SDCBP-205ENST00000447267 HDAC6Q9UBN7 1215 aa6.01□□□□□ -1.45
SDCBP-205ENST00000447267 FBN2P35556 2912 aa6□□□□□ -1.45
SDCBP-205ENST00000447267 KANSL1LA0AUZ9 987 aa6□□□□□ -1.45
SDCBP-205ENST00000447267 MPHOSPH10O00566 681 aaKnown RBP6□□□□□ -1.45
SDCBP-205ENST00000447267 ESR1P03372 595 aa6□□□□□ -1.45
SDCBP-205ENST00000447267 PGRP06401 933 aa6□□□□□ -1.45
SDCBP-205ENST00000447267 SRFP11831 508 aa6□□□□□ -1.45
SDCBP-205ENST00000447267 GP1BBP13224 206 aa6□□□□□ -1.45
SDCBP-205ENST00000447267 TDGF1P13385 188 aa6□□□□□ -1.45
SDCBP-205ENST00000447267 KRT10P13645 584 aa6□□□□□ -1.45
SDCBP-205ENST00000447267 CEACAM1P13688 526 aa6□□□□□ -1.45
SDCBP-205ENST00000447267 TMPOP42166 694 aaKnown RBP6□□□□□ -1.45
SDCBP-205ENST00000447267 GATMP50440 423 aa6□□□□□ -1.45
SDCBP-205ENST00000447267 ADCY1Q08828 1119 aa6□□□□□ -1.45
SDCBP-205ENST00000447267 MTAPQ13126 283 aa6□□□□□ -1.45
SDCBP-205ENST00000447267 KIAA1841Q6NSI8 718 aa6□□□□□ -1.45
SDCBP-205ENST00000447267 TMC5Q6UXY8 1006 aa6□□□□□ -1.45
SDCBP-205ENST00000447267 RUFY4Q6ZNE9 571 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms