RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 MEIS3Q99687 375 aa3.82□□□□□ -1.8
PMS1-215ENST00000447232 MAF1Q9H063 256 aa3.82□□□□□ -1.8
PMS1-215ENST00000447232 MRVI1Q9Y6F6 885 aa3.82□□□□□ -1.8
PMS1-215ENST00000447232 IGSF9BQ9UPX0 1349 aa3.82□□□□□ -1.8
PMS1-215ENST00000447232 F5P12259 2224 aa3.81□□□□□ -1.8
PMS1-215ENST00000447232 URB1O60287 2271 aaKnown RBP3.81□□□□□ -1.8
PMS1-215ENST00000447232 MBLAC1A4D2B0 266 aaPredicted RBP3.81□□□□□ -1.8
PMS1-215ENST00000447232 C4orf47A7E2U8 309 aa3.81□□□□□ -1.8
PMS1-215ENST00000447232 CHURC1-FNTBB4DL54 471 aa3.81□□□□□ -1.8
PMS1-215ENST00000447232 C9IYK1 514 aa3.81□□□□□ -1.8
PMS1-215ENST00000447232 MGEA5O60502 916 aa3.81□□□□□ -1.8
PMS1-215ENST00000447232 EIF3JO75822 258 aaKnown RBP3.81□□□□□ -1.8
PMS1-215ENST00000447232 ALX3O95076 343 aa3.81□□□□□ -1.8
PMS1-215ENST00000447232 MBD4O95243 580 aa3.81□□□□□ -1.8
PMS1-215ENST00000447232 PAPSS2O95340 614 aaPredicted RBP3.81□□□□□ -1.8
PMS1-215ENST00000447232 CTSAP10619 480 aa3.81□□□□□ -1.8
PMS1-215ENST00000447232 FNTBP49356 437 aa3.81□□□□□ -1.8
PMS1-215ENST00000447232 CLCN4P51793 760 aa3.81□□□□□ -1.8
PMS1-215ENST00000447232 ARHGAP4P98171 946 aa3.81□□□□□ -1.8
PMS1-215ENST00000447232 SP2Q02086 613 aa3.81□□□□□ -1.8
PMS1-215ENST00000447232 SBK1Q52WX2 424 aa3.81□□□□□ -1.8
PMS1-215ENST00000447232 LONP2Q86WA8 852 aa3.81□□□□□ -1.8
PMS1-215ENST00000447232 NSUN6Q8TEA1 469 aaKnown RBP3.81□□□□□ -1.8
PMS1-215ENST00000447232 FGF14Q92915 247 aa3.81□□□□□ -1.8
PMS1-215ENST00000447232 CRELD1Q96HD1 420 aa3.81□□□□□ -1.8
PMS1-215ENST00000447232 CASD1Q96PB1 797 aa3.81□□□□□ -1.8
PMS1-215ENST00000447232 SMOC1Q9H4F8 434 aa3.81□□□□□ -1.8
PMS1-215ENST00000447232 AKTIPQ9H8T0 292 aa3.81□□□□□ -1.8
PMS1-215ENST00000447232 RNF19AQ9NV58 838 aa3.81□□□□□ -1.8
PMS1-215ENST00000447232 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.81□□□□□ -1.8
PMS1-215ENST00000447232 COL20A1Q9P218 1284 aa3.81□□□□□ -1.8
PMS1-215ENST00000447232 ARPP21Q9UBL0 812 aaPredicted RBP3.81□□□□□ -1.8
PMS1-215ENST00000447232 TRIM33Q9UPN9 1127 aa3.81□□□□□ -1.8
PMS1-215ENST00000447232 PCDHGA5Q9Y5G8 931 aa3.81□□□□□ -1.8
PMS1-215ENST00000447232 CACNA1EQ15878 2313 aa3.81□□□□□ -1.8
PMS1-215ENST00000447232 COL6A6A6NMZ7 2263 aa3.81□□□□□ -1.8
PMS1-215ENST00000447232 K7ESF4 209 aa3.81□□□□□ -1.8
PMS1-215ENST00000447232 GGPS1O95749 300 aa3.81□□□□□ -1.8
PMS1-215ENST00000447232 FGFR1P11362 822 aa3.81□□□□□ -1.8
PMS1-215ENST00000447232 UBA1P22314 1058 aaKnown RBP3.81□□□□□ -1.8
PMS1-215ENST00000447232 FAM189BP81408 668 aa3.81□□□□□ -1.8
PMS1-215ENST00000447232 MRPS6P82932 125 aaKnown RBP3.81□□□□□ -1.8
PMS1-215ENST00000447232 PFKPQ01813 784 aa3.81□□□□□ -1.8
PMS1-215ENST00000447232 SATB1Q01826 763 aa3.81□□□□□ -1.8
PMS1-215ENST00000447232 DAB2IPQ5VWQ8 1189 aa3.81□□□□□ -1.8
PMS1-215ENST00000447232 TCEAL6Q6IPX3 200 aa3.81□□□□□ -1.8
PMS1-215ENST00000447232 PARM1Q6UWI2 310 aa3.81□□□□□ -1.8
PMS1-215ENST00000447232 ZNF852Q6ZMS4 543 aa3.81□□□□□ -1.8
PMS1-215ENST00000447232 RSPH3Q86UC2 560 aa3.81□□□□□ -1.8
PMS1-215ENST00000447232 DNAJB3Q8WWF6 145 aa3.81□□□□□ -1.8
PMS1-215ENST00000447232 AUTS2Q8WXX7 1259 aa3.81□□□□□ -1.8
PMS1-215ENST00000447232 TCEAL3Q969E4 200 aa3.81□□□□□ -1.8
PMS1-215ENST00000447232 TAAR1Q96RJ0 339 aa3.81□□□□□ -1.8
PMS1-215ENST00000447232 EDEM2Q9BV94 578 aa3.81□□□□□ -1.8
PMS1-215ENST00000447232 TMEM117Q9H0C3 514 aa3.81□□□□□ -1.8
PMS1-215ENST00000447232 RBSNQ9H1K0 784 aa3.81□□□□□ -1.8
PMS1-215ENST00000447232 ELAC1Q9H777 363 aaKnown RBP3.81□□□□□ -1.8
PMS1-215ENST00000447232 MKNK2Q9HBH9 465 aa3.81□□□□□ -1.8
PMS1-215ENST00000447232 RGS18Q9NS28 235 aa3.81□□□□□ -1.8
PMS1-215ENST00000447232 C1orf112Q9NSG2 853 aa3.81□□□□□ -1.8
PMS1-215ENST00000447232 PNMA2Q9UL42 364 aa3.81□□□□□ -1.8
PMS1-215ENST00000447232 WDR19Q8NEZ3 1342 aa3.81□□□□□ -1.8
PMS1-215ENST00000447232 ASCC3Q8N3C0 2202 aaKnown RBP3.8□□□□□ -1.8
PMS1-215ENST00000447232 PLXNB3Q9ULL4 1909 aa3.8□□□□□ -1.8
PMS1-215ENST00000447232 PNMA6EA0A0J9YXQ4 647 aa3.8□□□□□ -1.8
PMS1-215ENST00000447232 HOXA6P31267 233 aa3.8□□□□□ -1.8
PMS1-215ENST00000447232 MPLP40238 635 aa3.8□□□□□ -1.8
PMS1-215ENST00000447232 POLGP54098 1239 aaPredicted RBP3.8□□□□□ -1.8
PMS1-215ENST00000447232 FGD1P98174 961 aa3.8□□□□□ -1.8
PMS1-215ENST00000447232 PAK2Q13177 524 aa3.8□□□□□ -1.8
PMS1-215ENST00000447232 LRP8Q14114 963 aa3.8□□□□□ -1.8
PMS1-215ENST00000447232 BMS1Q14692 1282 aaKnown RBP3.8□□□□□ -1.8
PMS1-215ENST00000447232 TTF1Q15361 905 aaPredicted RBP3.8□□□□□ -1.8
PMS1-215ENST00000447232 MARCH8Q5T0T0 291 aa3.8□□□□□ -1.8
PMS1-215ENST00000447232 KCNV1Q6PIU1 500 aa3.8□□□□□ -1.8
PMS1-215ENST00000447232 TPRG1Q6ZUI0 275 aa3.8□□□□□ -1.8
PMS1-215ENST00000447232 SLC24A5Q71RS6 500 aa3.8□□□□□ -1.8
PMS1-215ENST00000447232 VPS52Q8N1B4 723 aa3.8□□□□□ -1.8
PMS1-215ENST00000447232 LRRC43Q8N309 656 aa3.8□□□□□ -1.8
PMS1-215ENST00000447232 ST13P5Q8NFI4 369 aaPredicted RBP3.8□□□□□ -1.8
PMS1-215ENST00000447232 SYTL5Q8TDW5 730 aaPredicted RBP3.8□□□□□ -1.8
PMS1-215ENST00000447232 ZNF707Q96C28 371 aaPredicted RBP3.8□□□□□ -1.8
PMS1-215ENST00000447232 EAF2Q96CJ1 260 aaPredicted RBP3.8□□□□□ -1.8
PMS1-215ENST00000447232 MRPL18Q9H0U6 180 aaKnown RBP3.8□□□□□ -1.8
PMS1-215ENST00000447232 VPS45Q9NRW7 570 aa3.8□□□□□ -1.8
PMS1-215ENST00000447232 TMEM161AQ9NX61 479 aa3.8□□□□□ -1.8
PMS1-215ENST00000447232 STIM2Q9P246 746 aa3.8□□□□□ -1.8
PMS1-215ENST00000447232 ISY1Q9ULR0 285 aaKnown RBP3.8□□□□□ -1.8
PMS1-215ENST00000447232 MRPS17Q9Y2R5 130 aaKnown RBP3.8□□□□□ -1.8
PMS1-215ENST00000447232 RAXQ9Y2V3 346 aa3.8□□□□□ -1.8
PMS1-215ENST00000447232 ZFP37Q9Y6Q3 630 aaPredicted RBP3.8□□□□□ -1.8
PMS1-215ENST00000447232 KDM3AQ9Y4C1 1321 aa3.8□□□□□ -1.8
PMS1-215ENST00000447232 COL4A2P08572 1712 aa3.8□□□□□ -1.8
PMS1-215ENST00000447232 RELNP78509 3460 aa3.8□□□□□ -1.8
PMS1-215ENST00000447232 A0A087WV48 116 aa3.8□□□□□ -1.8
PMS1-215ENST00000447232 CCDC195A0A1B0GUA6 201 aa3.8□□□□□ -1.8
PMS1-215ENST00000447232 F8W735 103 aaPredicted RBP3.8□□□□□ -1.8
PMS1-215ENST00000447232 SORBS3O60504 671 aa3.8□□□□□ -1.8
PMS1-215ENST00000447232 RPLP2P05387 115 aaKnown RBP3.8□□□□□ -1.8
PMS1-215ENST00000447232 TGFB3P10600 412 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms