RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 UBOX5O94941 541 aa20.39■□□□□ 0.86
SDCBP-204ENST00000447182 CHKAP35790 457 aa20.39■□□□□ 0.86
SDCBP-204ENST00000447182 QARSP47897 775 aaKnown RBP20.39■□□□□ 0.86
SDCBP-204ENST00000447182 HSD17B4P51659 736 aa20.39■□□□□ 0.86
SDCBP-204ENST00000447182 NCALDP61601 193 aa20.39■□□□□ 0.86
SDCBP-204ENST00000447182 TNIP1Q15025 636 aa20.39■□□□□ 0.86
SDCBP-204ENST00000447182 SNRNP35Q16560 246 aaKnown RBP20.39■□□□□ 0.86
SDCBP-204ENST00000447182 LDHDQ86WU2 507 aa20.39■□□□□ 0.86
SDCBP-204ENST00000447182 CCHCR1Q8TD31 782 aa20.39■□□□□ 0.86
SDCBP-204ENST00000447182 GRK7Q8WTQ7 553 aa20.39■□□□□ 0.86
SDCBP-204ENST00000447182 FGFR1OP2Q9NVK5 253 aa20.39■□□□□ 0.86
SDCBP-204ENST00000447182 BAIAP2L1Q9UHR4 511 aa20.39■□□□□ 0.86
SDCBP-204ENST00000447182 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.39■□□□□ 0.86
SDCBP-204ENST00000447182 GJB6O95452 261 aa20.39■□□□□ 0.85
SDCBP-204ENST00000447182 MKRN3Q13064 507 aaKnown RBP20.39■□□□□ 0.85
SDCBP-204ENST00000447182 E2F5Q15329 346 aa20.39■□□□□ 0.85
SDCBP-204ENST00000447182 CLEC16AQ2KHT3 1053 aa20.39■□□□□ 0.85
SDCBP-204ENST00000447182 NSMFQ6X4W1 530 aa20.39■□□□□ 0.85
SDCBP-204ENST00000447182 TBC1D1Q86TI0 1168 aaPredicted RBP20.39■□□□□ 0.85
SDCBP-204ENST00000447182 PARD3BQ8TEW8 1205 aa20.39■□□□□ 0.85
SDCBP-204ENST00000447182 TCP11Q8WWU5 503 aa20.39■□□□□ 0.85
SDCBP-204ENST00000447182 TRAIPQ9BWF2 469 aa20.39■□□□□ 0.85
SDCBP-204ENST00000447182 CD2APQ9Y5K6 639 aa20.39■□□□□ 0.85
SDCBP-204ENST00000447182 SORBS3O60504 671 aa20.38■□□□□ 0.85
SDCBP-204ENST00000447182 ALADP13716 330 aa20.38■□□□□ 0.85
SDCBP-204ENST00000447182 NQO1P15559 274 aaKnown RBP20.38■□□□□ 0.85
SDCBP-204ENST00000447182 SF3A3Q12874 501 aaKnown RBP eCLIP20.38■□□□□ 0.85
SDCBP-204ENST00000447182 LRRC14Q15048 493 aa20.38■□□□□ 0.85
SDCBP-204ENST00000447182 GRIPAP1Q4V328 841 aa20.38■□□□□ 0.85
SDCBP-204ENST00000447182 TLDC1Q6P9B6 456 aa20.38■□□□□ 0.85
SDCBP-204ENST00000447182 CBWD2Q8IUF1 395 aa20.38■□□□□ 0.85
SDCBP-204ENST00000447182 NLGN1Q8N2Q7 840 aa20.38■□□□□ 0.85
SDCBP-204ENST00000447182 FAM81BQ96LP2 452 aa20.38■□□□□ 0.85
SDCBP-204ENST00000447182 NT5C1BQ96P26 610 aa20.38■□□□□ 0.85
SDCBP-204ENST00000447182 AVENQ9NQS1 362 aaPredicted RBP20.38■□□□□ 0.85
SDCBP-204ENST00000447182 CHST7Q9NS84 486 aa20.38■□□□□ 0.85
SDCBP-204ENST00000447182 LGALS13Q9UHV8 139 aa20.38■□□□□ 0.85
SDCBP-204ENST00000447182 EXOC7Q9UPT5 735 aa20.38■□□□□ 0.85
SDCBP-204ENST00000447182 GAS8O95995 478 aa20.38■□□□□ 0.85
SDCBP-204ENST00000447182 CREB1P16220 341 aa20.38■□□□□ 0.85
SDCBP-204ENST00000447182 ADSSP30520 456 aa20.38■□□□□ 0.85
SDCBP-204ENST00000447182 BNIP1Q12981 228 aa20.38■□□□□ 0.85
SDCBP-204ENST00000447182 OTUD6AQ7L8S5 288 aa20.38■□□□□ 0.85
SDCBP-204ENST00000447182 FBXL13Q8NEE6 735 aa20.38■□□□□ 0.85
SDCBP-204ENST00000447182 TMC2Q8TDI7 906 aa20.38■□□□□ 0.85
SDCBP-204ENST00000447182 N4BP2L2Q92802 583 aaPredicted RBP20.38■□□□□ 0.85
SDCBP-204ENST00000447182 EBF2Q9HAK2 575 aa20.38■□□□□ 0.85
SDCBP-204ENST00000447182 VEZTQ9HBM0 779 aa20.38■□□□□ 0.85
SDCBP-204ENST00000447182 PRKAG3Q9UGI9 489 aa20.38■□□□□ 0.85
SDCBP-204ENST00000447182 GOLGA8IPA6NC78 632 aa20.37■□□□□ 0.85
SDCBP-204ENST00000447182 GOLGA8JA6NMD2 632 aa20.37■□□□□ 0.85
SDCBP-204ENST00000447182 SLC16A4O15374 487 aa20.37■□□□□ 0.85
SDCBP-204ENST00000447182 CLTAP09496 248 aa20.37■□□□□ 0.85
SDCBP-204ENST00000447182 MAPK4P31152 587 aa20.37■□□□□ 0.85
SDCBP-204ENST00000447182 GTF2H1P32780 548 aa20.37■□□□□ 0.85
SDCBP-204ENST00000447182 SLC1A1P43005 524 aa20.37■□□□□ 0.85
SDCBP-204ENST00000447182 ITGA8P53708 1063 aa20.37■□□□□ 0.85
SDCBP-204ENST00000447182 NUGGCQ68CJ6 796 aa20.37■□□□□ 0.85
SDCBP-204ENST00000447182 PRMT6Q96LA8 375 aaPredicted RBP20.37■□□□□ 0.85
SDCBP-204ENST00000447182 DCLK3Q9C098 648 aa20.37■□□□□ 0.85
SDCBP-204ENST00000447182 ANAPC7Q9UJX3 599 aa20.37■□□□□ 0.85
SDCBP-204ENST00000447182 ARL2BPQ9Y2Y0 163 aa20.37■□□□□ 0.85
SDCBP-204ENST00000447182 YWHABP31946 246 aaKnown RBP20.36■□□□□ 0.85
SDCBP-204ENST00000447182 PEX3P56589 373 aa20.36■□□□□ 0.85
SDCBP-204ENST00000447182 SNX1Q13596 522 aa20.36■□□□□ 0.85
SDCBP-204ENST00000447182 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.36■□□□□ 0.85
SDCBP-204ENST00000447182 SPATA21Q7Z572 469 aa20.36■□□□□ 0.85
SDCBP-204ENST00000447182 PNMA8AQ86V59 439 aaPredicted RBP20.36■□□□□ 0.85
SDCBP-204ENST00000447182 RELL1Q8IUW5 271 aa20.36■□□□□ 0.85
SDCBP-204ENST00000447182 ATL2Q8NHH9 583 aa20.36■□□□□ 0.85
SDCBP-204ENST00000447182 MGARPQ8TDB4 240 aa20.36■□□□□ 0.85
SDCBP-204ENST00000447182 ECT2Q9H8V3 914 aa20.36■□□□□ 0.85
SDCBP-204ENST00000447182 AGO4Q9HCK5 861 aaKnown RBP20.36■□□□□ 0.85
SDCBP-204ENST00000447182 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.36■□□□□ 0.852e-6■■■■■ 96.1
SDCBP-204ENST00000447182 RAB20Q9NX57 234 aa20.36■□□□□ 0.85
SDCBP-204ENST00000447182 FEM1BQ9UK73 627 aa20.36■□□□□ 0.85
SDCBP-204ENST00000447182 ZBTB21Q9ULJ3 1066 aa20.36■□□□□ 0.85
SDCBP-204ENST00000447182 ADGRA3Q8IWK6 1321 aa20.36■□□□□ 0.85
SDCBP-204ENST00000447182 A0A1B0GUA9 196 aa20.36■□□□□ 0.85
SDCBP-204ENST00000447182 COPS2P61201 443 aa20.36■□□□□ 0.85
SDCBP-204ENST00000447182 CENPCQ03188 943 aa20.36■□□□□ 0.85
SDCBP-204ENST00000447182 PTP4A2Q12974 167 aa20.36■□□□□ 0.85
SDCBP-204ENST00000447182 KYNUQ16719 465 aa20.36■□□□□ 0.85
SDCBP-204ENST00000447182 MFSD14AQ96MC6 490 aa20.36■□□□□ 0.85
SDCBP-204ENST00000447182 NINJ2Q9NZG7 142 aa20.36■□□□□ 0.85
SDCBP-204ENST00000447182 NEU2Q9Y3R4 380 aa20.36■□□□□ 0.85
SDCBP-204ENST00000447182 ACTL7BQ9Y614 415 aa20.36■□□□□ 0.85
SDCBP-204ENST00000447182 THAP12O43422 761 aa20.35■□□□□ 0.85
SDCBP-204ENST00000447182 UNGP13051 313 aaPredicted RBP20.35■□□□□ 0.85
SDCBP-204ENST00000447182 ATF2P15336 505 aa20.35■□□□□ 0.85
SDCBP-204ENST00000447182 MPP2Q14168 576 aa20.35■□□□□ 0.85
SDCBP-204ENST00000447182 ENOSF1Q7L5Y1 443 aa20.35■□□□□ 0.85
SDCBP-204ENST00000447182 MAP4K3Q8IVH8 894 aa20.35■□□□□ 0.85
SDCBP-204ENST00000447182 C4orf19Q8IY42 314 aa20.35■□□□□ 0.85
SDCBP-204ENST00000447182 MCOLN2Q8IZK6 566 aa20.35■□□□□ 0.85
SDCBP-204ENST00000447182 TAS1R2Q8TE23 839 aa20.35■□□□□ 0.85
SDCBP-204ENST00000447182 FBXL18Q96ME1 805 aa20.35■□□□□ 0.85
SDCBP-204ENST00000447182 RXFP1Q9HBX9 757 aa20.35■□□□□ 0.85
SDCBP-204ENST00000447182 PKD2L1Q9P0L9 805 aa20.35■□□□□ 0.85
SDCBP-204ENST00000447182 CTNNAL1Q9UBT7 734 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms