RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 VN1R2Q8NFZ6 395 aa16.22■□□□□ 0.19
HDAC4-204ENST00000446876 HASPINQ8TF76 798 aa16.22■□□□□ 0.19
HDAC4-204ENST00000446876 PPP2R3CQ969Q6 453 aa16.22■□□□□ 0.19
HDAC4-204ENST00000446876 SNX27Q96L92 541 aa16.22■□□□□ 0.19
HDAC4-204ENST00000446876 ACAP3Q96P50 834 aa16.22■□□□□ 0.19
HDAC4-204ENST00000446876 PPP1R10Q96QC0 940 aaKnown RBP16.22■□□□□ 0.19
HDAC4-204ENST00000446876 BLZF1Q9H2G9 400 aa16.22■□□□□ 0.19
HDAC4-204ENST00000446876 ST6GALNAC4Q9H4F1 302 aa16.22■□□□□ 0.19
HDAC4-204ENST00000446876 GOLGA2P5Q9HBQ8 144 aa16.22■□□□□ 0.19
HDAC4-204ENST00000446876 NGRNQ9NPE2 291 aaKnown RBP16.22■□□□□ 0.19
HDAC4-204ENST00000446876 SEL1LQ9UBV2 794 aa16.22■□□□□ 0.19
HDAC4-204ENST00000446876 SERTAD1Q9UHV2 236 aa16.22■□□□□ 0.19
HDAC4-204ENST00000446876 ANK1P16157 1881 aa16.22■□□□□ 0.19
HDAC4-204ENST00000446876 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.21■□□□□ 0.19
HDAC4-204ENST00000446876 CARNS1A5YM72 827 aa16.21■□□□□ 0.19
HDAC4-204ENST00000446876 GCNT3O95395 438 aa16.21■□□□□ 0.19
HDAC4-204ENST00000446876 CXCL14O95715 111 aa16.21■□□□□ 0.19
HDAC4-204ENST00000446876 CXCL8P10145 99 aa16.21■□□□□ 0.19
HDAC4-204ENST00000446876 IGFBP6P24592 240 aaPredicted RBP16.21■□□□□ 0.19
HDAC4-204ENST00000446876 AFMP43652 599 aa16.21■□□□□ 0.19
HDAC4-204ENST00000446876 NUCB2P80303 420 aa16.21■□□□□ 0.19
HDAC4-204ENST00000446876 SOX4Q06945 474 aaPredicted RBP16.21■□□□□ 0.19
HDAC4-204ENST00000446876 ADAM15Q13444 863 aa16.21■□□□□ 0.19
HDAC4-204ENST00000446876 CTC1Q2NKJ3 1217 aa16.21■□□□□ 0.19
HDAC4-204ENST00000446876 TJAP1Q5JTD0 557 aa16.21■□□□□ 0.19
HDAC4-204ENST00000446876 ADALQ6DHV7 355 aa16.21■□□□□ 0.19
HDAC4-204ENST00000446876 PDE12Q6L8Q7 609 aaKnown RBP16.21■□□□□ 0.19
HDAC4-204ENST00000446876 LLGL2Q6P1M3 1020 aa16.21■□□□□ 0.19
HDAC4-204ENST00000446876 CCDC65Q8IXS2 484 aa16.21■□□□□ 0.19
HDAC4-204ENST00000446876 TMEM130Q8N3G9 435 aa16.21■□□□□ 0.19
HDAC4-204ENST00000446876 EFHBQ8N7U6 833 aa16.21■□□□□ 0.19
HDAC4-204ENST00000446876 B3GALT6Q96L58 329 aa16.21■□□□□ 0.19
HDAC4-204ENST00000446876 ZMAT2Q96NC0 199 aaKnown RBP16.21■□□□□ 0.19
HDAC4-204ENST00000446876 STRA6Q9BX79 667 aa16.21■□□□□ 0.19
HDAC4-204ENST00000446876 TOPORSQ9NS56 1045 aaPredicted RBP16.21■□□□□ 0.19
HDAC4-204ENST00000446876 BARX2Q9UMQ3 279 aaPredicted RBP16.21■□□□□ 0.19
HDAC4-204ENST00000446876 VWA8A3KMH1 1905 aa16.2■□□□□ 0.18
HDAC4-204ENST00000446876 SMIM28A0A1B0GU29 152 aa16.2■□□□□ 0.18
HDAC4-204ENST00000446876 ACTN4O43707 911 aaKnown RBP16.2■□□□□ 0.18
HDAC4-204ENST00000446876 FAM189A1O60320 539 aa16.2■□□□□ 0.18
HDAC4-204ENST00000446876 NR1I2O75469 434 aa16.2■□□□□ 0.18
HDAC4-204ENST00000446876 KIF4AO95239 1232 aa16.2■□□□□ 0.18
HDAC4-204ENST00000446876 CTSAP10619 480 aa16.2■□□□□ 0.18
HDAC4-204ENST00000446876 CMA1P23946 247 aa16.2■□□□□ 0.18
HDAC4-204ENST00000446876 NDUFV1P49821 464 aa16.2■□□□□ 0.18
HDAC4-204ENST00000446876 SPAG1Q07617 926 aa16.2■□□□□ 0.18
HDAC4-204ENST00000446876 HSP90AA2PQ14568 343 aaPredicted RBP16.2■□□□□ 0.18
HDAC4-204ENST00000446876 PTPN14Q15678 1187 aa16.2■□□□□ 0.18
HDAC4-204ENST00000446876 SLC10A6Q3KNW5 377 aa16.2■□□□□ 0.18
HDAC4-204ENST00000446876 XKR4Q5GH76 650 aa16.2■□□□□ 0.18
HDAC4-204ENST00000446876 ALKAL1Q6UXT8 129 aa16.2■□□□□ 0.18
HDAC4-204ENST00000446876 MRPL43Q8N983 215 aaKnown RBP16.2■□□□□ 0.18
HDAC4-204ENST00000446876 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.2■□□□□ 0.18
HDAC4-204ENST00000446876 C7orf25Q9BPX7 421 aa16.2■□□□□ 0.18
HDAC4-204ENST00000446876 MSTO1Q9BUK6 570 aa16.2■□□□□ 0.18
HDAC4-204ENST00000446876 HERC2P3Q9BVR0 1158 aa16.2■□□□□ 0.18
HDAC4-204ENST00000446876 COLEC11Q9BWP8 271 aa16.2■□□□□ 0.18
HDAC4-204ENST00000446876 GPR62Q9BZJ7 368 aa16.2■□□□□ 0.18
HDAC4-204ENST00000446876 SCAND2PQ9GZW5 306 aaPredicted RBP16.2■□□□□ 0.18
HDAC4-204ENST00000446876 GOLPH3LQ9H4A5 285 aa16.2■□□□□ 0.18
HDAC4-204ENST00000446876 MAGEF1Q9HAY2 307 aa16.2■□□□□ 0.18
HDAC4-204ENST00000446876 OLFML3Q9NRN5 406 aa16.2■□□□□ 0.18
HDAC4-204ENST00000446876 HPSEQ9Y251 543 aa16.2■□□□□ 0.18
HDAC4-204ENST00000446876 PLXNA3P51805 1871 aa16.2■□□□□ 0.18
HDAC4-204ENST00000446876 A0A0B4J269 797 aa16.19■□□□□ 0.18
HDAC4-204ENST00000446876 C2CD2LO14523 706 aa16.19■□□□□ 0.18
HDAC4-204ENST00000446876 PRPF6O94906 941 aaKnown RBP16.19■□□□□ 0.18
HDAC4-204ENST00000446876 EFEMP2O95967 443 aa16.19■□□□□ 0.18
HDAC4-204ENST00000446876 SOD2P04179 222 aa16.19■□□□□ 0.18
HDAC4-204ENST00000446876 BMP1P13497 986 aa16.19■□□□□ 0.18
HDAC4-204ENST00000446876 SCP2P22307 547 aa16.19■□□□□ 0.18
HDAC4-204ENST00000446876 NDUFA8P51970 172 aa16.19■□□□□ 0.18
HDAC4-204ENST00000446876 AMPD3Q01432 767 aa16.19■□□□□ 0.18
HDAC4-204ENST00000446876 CUL4BQ13620 913 aa16.19■□□□□ 0.18
HDAC4-204ENST00000446876 AAK1Q2M2I8 961 aa16.19■□□□□ 0.18
HDAC4-204ENST00000446876 LEXMQ3ZCV2 418 aa16.19■□□□□ 0.18
HDAC4-204ENST00000446876 L1TD1Q5T7N2 865 aaKnown RBP16.19■□□□□ 0.18
HDAC4-204ENST00000446876 FUT10Q6P4F1 479 aa16.19■□□□□ 0.18
HDAC4-204ENST00000446876 RNF168Q8IYW5 571 aaPredicted RBP16.19■□□□□ 0.18
HDAC4-204ENST00000446876 CEP57L1Q8IYX8 460 aa16.19■□□□□ 0.18
HDAC4-204ENST00000446876 FSIP1Q8NA03 581 aa16.19■□□□□ 0.18
HDAC4-204ENST00000446876 C18orf25Q96B23 403 aaPredicted RBP16.19■□□□□ 0.18
HDAC4-204ENST00000446876 HVCN1Q96D96 273 aa16.19■□□□□ 0.18
HDAC4-204ENST00000446876 NECAB3Q96P71 396 aaPredicted RBP16.19■□□□□ 0.18
HDAC4-204ENST00000446876 COL25A1Q9BXS0 654 aaPredicted RBP16.19■□□□□ 0.18
HDAC4-204ENST00000446876 LRRC27Q9C0I9 530 aa16.19■□□□□ 0.18
HDAC4-204ENST00000446876 CLEC1BQ9P126 229 aa16.19■□□□□ 0.18
HDAC4-204ENST00000446876 CNTN3Q9P232 1028 aa16.19■□□□□ 0.18
HDAC4-204ENST00000446876 ADAM28Q9UKQ2 775 aa16.19■□□□□ 0.18
HDAC4-204ENST00000446876 OGTO15294 1046 aa16.18■□□□□ 0.18
HDAC4-204ENST00000446876 NCK2O43639 380 aa16.18■□□□□ 0.18
HDAC4-204ENST00000446876 CLASP2O75122 1294 aaKnown RBP16.18■□□□□ 0.18
HDAC4-204ENST00000446876 CLTAP09496 248 aa16.18■□□□□ 0.18
HDAC4-204ENST00000446876 ABCD1P33897 745 aa16.18■□□□□ 0.18
HDAC4-204ENST00000446876 CLCNKBP51801 687 aa16.18■□□□□ 0.18
HDAC4-204ENST00000446876 ENOX2Q16206 610 aaKnown RBP16.18■□□□□ 0.18
HDAC4-204ENST00000446876 ACCSQ96QU6 501 aa16.18■□□□□ 0.18
HDAC4-204ENST00000446876 CDCA3Q99618 268 aaPredicted RBP16.18■□□□□ 0.18
HDAC4-204ENST00000446876 TUBGCP4Q9UGJ1 667 aa16.18■□□□□ 0.18
HDAC4-204ENST00000446876 TADA2AO75478 443 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms