RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 A0A0G2JLL6 359 aaPredicted RBP18.06■□□□□ 0.48
LAPTM4B-201ENST00000445593 AGPSO00116 658 aa18.06■□□□□ 0.48
LAPTM4B-201ENST00000445593 CD58P19256 250 aa18.06■□□□□ 0.48
LAPTM4B-201ENST00000445593 EPHB4P54760 987 aa18.06■□□□□ 0.48
LAPTM4B-201ENST00000445593 ITIH3Q06033 890 aa18.06■□□□□ 0.48
LAPTM4B-201ENST00000445593 PRRT2Q7Z6L0 340 aaPredicted RBP18.06■□□□□ 0.48
LAPTM4B-201ENST00000445593 GOLGA6L1Q8N7Z2 621 aa18.06■□□□□ 0.48
LAPTM4B-201ENST00000445593 SEPT1Q8WYJ6 367 aa18.06■□□□□ 0.48
LAPTM4B-201ENST00000445593 HES6Q96HZ4 224 aa18.06■□□□□ 0.48
LAPTM4B-201ENST00000445593 MMP19Q99542 508 aa18.06■□□□□ 0.48
LAPTM4B-201ENST00000445593 C17orf75Q9HAS0 396 aa18.06■□□□□ 0.48
LAPTM4B-201ENST00000445593 ERVK-5Q9HDB9 667 aa18.06■□□□□ 0.48
LAPTM4B-201ENST00000445593 RNF14Q9UBS8 474 aa18.06■□□□□ 0.48
LAPTM4B-201ENST00000445593 EXTL3O43909 919 aa18.05■□□□□ 0.48
LAPTM4B-201ENST00000445593 STAM2O75886 525 aa18.05■□□□□ 0.48
LAPTM4B-201ENST00000445593 KRT14P02533 472 aa18.05■□□□□ 0.48
LAPTM4B-201ENST00000445593 EPHX2P34913 555 aa18.05■□□□□ 0.48
LAPTM4B-201ENST00000445593 PPATQ06203 517 aa18.05■□□□□ 0.48
LAPTM4B-201ENST00000445593 TMEM270Q6UE05 265 aa18.05■□□□□ 0.48
LAPTM4B-201ENST00000445593 THNSL1Q8IYQ7 743 aa18.05■□□□□ 0.48
LAPTM4B-201ENST00000445593 NRBP2Q9NSY0 501 aa18.05■□□□□ 0.48
LAPTM4B-201ENST00000445593 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.05■□□□□ 0.48
LAPTM4B-201ENST00000445593 A0A0A6YYK5 440 aaPredicted RBP18.05■□□□□ 0.48
LAPTM4B-201ENST00000445593 RFX1P22670 979 aa18.05■□□□□ 0.48
LAPTM4B-201ENST00000445593 CLCN3P51790 818 aa18.05■□□□□ 0.48
LAPTM4B-201ENST00000445593 WDR44Q5JSH3 913 aa18.05■□□□□ 0.48
LAPTM4B-201ENST00000445593 SCARA5Q6ZMJ2 495 aa18.05■□□□□ 0.48
LAPTM4B-201ENST00000445593 SLFN11Q7Z7L1 901 aa18.05■□□□□ 0.48
LAPTM4B-201ENST00000445593 USP37Q86T82 979 aa18.05■□□□□ 0.48
LAPTM4B-201ENST00000445593 INTUQ9ULD6 942 aa18.05■□□□□ 0.48
LAPTM4B-201ENST00000445593 NCANO14594 1321 aa18.05■□□□□ 0.48
LAPTM4B-201ENST00000445593 MYPNQ86TC9 1320 aa18.05■□□□□ 0.48
LAPTM4B-201ENST00000445593 DDX3YO15523 660 aaKnown RBP18.05■□□□□ 0.48
LAPTM4B-201ENST00000445593 DAPK3O43293 454 aa18.05■□□□□ 0.48
LAPTM4B-201ENST00000445593 GJB6O95452 261 aa18.05■□□□□ 0.48
LAPTM4B-201ENST00000445593 ANXA13P27216 316 aa18.05■□□□□ 0.48
LAPTM4B-201ENST00000445593 GPC3P51654 580 aa18.05■□□□□ 0.48
LAPTM4B-201ENST00000445593 NEDD9Q14511 834 aa18.05■□□□□ 0.48
LAPTM4B-201ENST00000445593 CRELD2Q6UXH1 353 aaPredicted RBP18.05■□□□□ 0.48
LAPTM4B-201ENST00000445593 ZNF564Q8TBZ8 553 aaPredicted RBP18.05■□□□□ 0.48
LAPTM4B-201ENST00000445593 FBXL18Q96ME1 805 aa18.05■□□□□ 0.48
LAPTM4B-201ENST00000445593 INO80B-WBP1J3KQ70 363 aa18.04■□□□□ 0.48
LAPTM4B-201ENST00000445593 GARTP22102 1010 aa18.04■□□□□ 0.48
LAPTM4B-201ENST00000445593 CEP120Q8N960 986 aa18.04■□□□□ 0.48
LAPTM4B-201ENST00000445593 FAM71BQ8TC56 605 aa18.04■□□□□ 0.48
LAPTM4B-201ENST00000445593 PSPC1Q8WXF1 523 aaKnown RBP18.04■□□□□ 0.48
LAPTM4B-201ENST00000445593 HVCN1Q96D96 273 aa18.04■□□□□ 0.48
LAPTM4B-201ENST00000445593 INO80BQ9C086 356 aaPredicted RBP18.04■□□□□ 0.48
LAPTM4B-201ENST00000445593 ZC3H4Q9UPT8 1303 aaKnown RBP18.04■□□□□ 0.48
LAPTM4B-201ENST00000445593 LCTP09848 1927 aa18.04■□□□□ 0.48
LAPTM4B-201ENST00000445593 CLDN3O15551 220 aa18.04■□□□□ 0.48
LAPTM4B-201ENST00000445593 RTN2O75298 545 aa18.04■□□□□ 0.48
LAPTM4B-201ENST00000445593 TXNP10599 105 aaKnown RBP18.04■□□□□ 0.48
LAPTM4B-201ENST00000445593 ICAM3P32942 547 aa18.04■□□□□ 0.48
LAPTM4B-201ENST00000445593 NAMPTP43490 491 aa18.04■□□□□ 0.48
LAPTM4B-201ENST00000445593 MAP1SQ66K74 1059 aaPredicted RBP18.04■□□□□ 0.48
LAPTM4B-201ENST00000445593 METTL7BQ6UX53 244 aa18.04■□□□□ 0.48
LAPTM4B-201ENST00000445593 SH2D3CQ8N5H7 860 aa18.04■□□□□ 0.48
LAPTM4B-201ENST00000445593 NEUROG2Q9H2A3 272 aa18.04■□□□□ 0.48
LAPTM4B-201ENST00000445593 CNOT8Q9UFF9 292 aaKnown RBP18.04■□□□□ 0.48
LAPTM4B-201ENST00000445593 PCDHB4Q9Y5E5 795 aa18.04■□□□□ 0.48
LAPTM4B-201ENST00000445593 BRCA2P51587 3418 aa18.04■□□□□ 0.48
LAPTM4B-201ENST00000445593 B4GALT5O43286 388 aa18.03■□□□□ 0.48
LAPTM4B-201ENST00000445593 GTF2A1P52655 376 aaPredicted RBP18.03■□□□□ 0.48
LAPTM4B-201ENST00000445593 PAK2Q13177 524 aa18.03■□□□□ 0.48
LAPTM4B-201ENST00000445593 FAM160B1Q5W0V3 765 aa18.03■□□□□ 0.48
LAPTM4B-201ENST00000445593 DPY19L2Q6NUT2 758 aa18.03■□□□□ 0.48
LAPTM4B-201ENST00000445593 OR2W6PQ8NHA6 318 aa18.03■□□□□ 0.48
LAPTM4B-201ENST00000445593 TMC2Q8TDI7 906 aa18.03■□□□□ 0.48
LAPTM4B-201ENST00000445593 APOBEC3GQ9HC16 384 aaKnown RBP18.03■□□□□ 0.48
LAPTM4B-201ENST00000445593 AGTPBP1Q9UPW5 1226 aa18.03■□□□□ 0.48
LAPTM4B-201ENST00000445593 GJA5P36382 358 aa18.03■□□□□ 0.48
LAPTM4B-201ENST00000445593 ARL2P36404 184 aa18.03■□□□□ 0.48
LAPTM4B-201ENST00000445593 SSR1P43307 286 aaKnown RBP18.03■□□□□ 0.48
LAPTM4B-201ENST00000445593 ACTRT1Q8TDG2 376 aa18.03■□□□□ 0.48
LAPTM4B-201ENST00000445593 ARL8AQ96BM9 186 aa18.03■□□□□ 0.48
LAPTM4B-201ENST00000445593 TCRBV7S2A1N4TA0A589 114 aa18.03■□□□□ 0.48
LAPTM4B-201ENST00000445593 SPDYE5A6NIY4 337 aa18.03■□□□□ 0.48
LAPTM4B-201ENST00000445593 ATG7O95352 703 aa18.03■□□□□ 0.48
LAPTM4B-201ENST00000445593 VNN1O95497 513 aa18.03■□□□□ 0.48
LAPTM4B-201ENST00000445593 CYP2C19P33261 490 aa18.03■□□□□ 0.48
LAPTM4B-201ENST00000445593 FLT3P36888 993 aa18.03■□□□□ 0.48
LAPTM4B-201ENST00000445593 CDR2Q01850 454 aa18.03■□□□□ 0.48
LAPTM4B-201ENST00000445593 SCFD2Q8WU76 684 aa18.03■□□□□ 0.48
LAPTM4B-201ENST00000445593 FGD4Q96M96 766 aa18.03■□□□□ 0.48
LAPTM4B-201ENST00000445593 ZIM3Q96PE6 472 aa18.03■□□□□ 0.48
LAPTM4B-201ENST00000445593 MTMR12Q9C0I1 747 aa18.03■□□□□ 0.48
LAPTM4B-201ENST00000445593 ISCUQ9H1K1 167 aa18.03■□□□□ 0.48
LAPTM4B-201ENST00000445593 PTPN22Q9Y2R2 807 aa18.03■□□□□ 0.48
LAPTM4B-201ENST00000445593 ZBTB48P10074 688 aaPredicted RBP18.02■□□□□ 0.48
LAPTM4B-201ENST00000445593 SNRPFP62306 86 aaKnown RBP18.02■□□□□ 0.48
LAPTM4B-201ENST00000445593 MAATS1Q7Z4T9 603 aa18.02■□□□□ 0.48
LAPTM4B-201ENST00000445593 RHOT2Q8IXI1 618 aa18.02■□□□□ 0.48
LAPTM4B-201ENST00000445593 C10orf67Q8IYJ2 551 aa18.02■□□□□ 0.48
LAPTM4B-201ENST00000445593 CYFIP2Q96F07 1278 aa18.02■□□□□ 0.48
LAPTM4B-201ENST00000445593 C11orf70Q9BRQ4 267 aa18.02■□□□□ 0.48
LAPTM4B-201ENST00000445593 GDF3Q9NR23 364 aa18.02■□□□□ 0.48
LAPTM4B-201ENST00000445593 GINS2Q9Y248 185 aa18.02■□□□□ 0.48
LAPTM4B-201ENST00000445593 MAPK13O15264 365 aa18.02■□□□□ 0.48
LAPTM4B-201ENST00000445593 HSF2BPO75031 334 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms