RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 DDX19AQ9NUU7 478 aaKnown RBP17.01■□□□□ 0.31
SEC13-213ENST00000445064 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.01■□□□□ 0.31
SEC13-213ENST00000445064 WNT16Q9UBV4 365 aa17.01■□□□□ 0.31
SEC13-213ENST00000445064 NOL7Q9UMY1 257 aaKnown RBP17.01■□□□□ 0.31
SEC13-213ENST00000445064 PROB1E7EW31 1015 aa17■□□□□ 0.31
SEC13-213ENST00000445064 TRAPPC10P48553 1259 aa17■□□□□ 0.31
SEC13-213ENST00000445064 TOB1P50616 345 aaPredicted RBP17■□□□□ 0.31
SEC13-213ENST00000445064 EFNA5P52803 228 aa17■□□□□ 0.31
SEC13-213ENST00000445064 NTHL1P78549 312 aa17■□□□□ 0.31
SEC13-213ENST00000445064 PTGDRQ13258 359 aa17■□□□□ 0.31
SEC13-213ENST00000445064 PDIA5Q14554 519 aa17■□□□□ 0.31
SEC13-213ENST00000445064 GLRA4Q5JXX5 417 aa17■□□□□ 0.31
SEC13-213ENST00000445064 ATF7IP2Q5U623 682 aa17■□□□□ 0.31
SEC13-213ENST00000445064 ASCL5Q7RTU5 278 aa17■□□□□ 0.31
SEC13-213ENST00000445064 KIFAP3Q92845 792 aa17■□□□□ 0.31
SEC13-213ENST00000445064 NXPE3Q969Y0 559 aa17■□□□□ 0.31
SEC13-213ENST00000445064 RTP3Q9BQQ7 232 aa17■□□□□ 0.31
SEC13-213ENST00000445064 FBXW11Q9UKB1 542 aa17■□□□□ 0.31
SEC13-213ENST00000445064 CA14Q9ULX7 337 aa17■□□□□ 0.31
SEC13-213ENST00000445064 PCDHB6Q9Y5E3 794 aa17■□□□□ 0.31
SEC13-213ENST00000445064 E9PMD0 336 aa16.99■□□□□ 0.31
SEC13-213ENST00000445064 SRFP11831 508 aa16.99■□□□□ 0.31
SEC13-213ENST00000445064 FSHRP23945 695 aa16.99■□□□□ 0.31
SEC13-213ENST00000445064 NBL1P41271 181 aa16.99■□□□□ 0.31
SEC13-213ENST00000445064 CLCNKBP51801 687 aa16.99■□□□□ 0.31
SEC13-213ENST00000445064 DCAF4L1Q3SXM0 396 aa16.99■□□□□ 0.31
SEC13-213ENST00000445064 PPM1LQ5SGD2 360 aa16.99■□□□□ 0.31
SEC13-213ENST00000445064 SNX29Q8TEQ0 813 aa16.99■□□□□ 0.31
SEC13-213ENST00000445064 KIF2CQ99661 725 aa16.99■□□□□ 0.31
SEC13-213ENST00000445064 POLIQ9UNA4 740 aa16.99■□□□□ 0.31
SEC13-213ENST00000445064 CCDC169A6NNP5 214 aa16.98■□□□□ 0.31
SEC13-213ENST00000445064 PP2D1A8MPX8 630 aa16.98■□□□□ 0.31
SEC13-213ENST00000445064 CCL16O15467 120 aa16.98■□□□□ 0.31
SEC13-213ENST00000445064 B3GAT3O94766 335 aa16.98■□□□□ 0.31
SEC13-213ENST00000445064 C8AP07357 584 aa16.98■□□□□ 0.31
SEC13-213ENST00000445064 U2AF2P26368 475 aaKnown RBP eCLIP16.98■□□□□ 0.315e-11■■□□□ 11.9
SEC13-213ENST00000445064 CDC25AP30304 524 aa16.98■□□□□ 0.31
SEC13-213ENST00000445064 OR1D2P34982 312 aa16.98■□□□□ 0.31
SEC13-213ENST00000445064 PEX3P56589 373 aa16.98■□□□□ 0.31
SEC13-213ENST00000445064 ELAVL2Q12926 359 aaKnown RBP16.98■□□□□ 0.31
SEC13-213ENST00000445064 LIN9Q5TKA1 542 aa16.98■□□□□ 0.31
SEC13-213ENST00000445064 DCLRE1AQ6PJP8 1040 aa16.98■□□□□ 0.31
SEC13-213ENST00000445064 FRMD5Q7Z6J6 570 aa16.98■□□□□ 0.31
SEC13-213ENST00000445064 CCDC105Q8IYK2 499 aa16.98■□□□□ 0.31
SEC13-213ENST00000445064 CEP120Q8N960 986 aa16.98■□□□□ 0.31
SEC13-213ENST00000445064 IGSF22Q8N9C0 903 aa16.98■□□□□ 0.31
SEC13-213ENST00000445064 DTWD2Q8NBA8 298 aa16.98■□□□□ 0.31
SEC13-213ENST00000445064 GPR152Q8TDT2 470 aa16.98■□□□□ 0.31
SEC13-213ENST00000445064 PPP1R10Q96QC0 940 aaKnown RBP16.98■□□□□ 0.31
SEC13-213ENST00000445064 RPP25Q9BUL9 199 aaKnown RBP16.98■□□□□ 0.31
SEC13-213ENST00000445064 GOLGA2P5Q9HBQ8 144 aa16.98■□□□□ 0.31
SEC13-213ENST00000445064 SH2B1Q9NRF2 756 aaPredicted RBP16.98■□□□□ 0.31
SEC13-213ENST00000445064 TNFSF13BQ9Y275 285 aa16.98■□□□□ 0.31
SEC13-213ENST00000445064 NUMBLQ9Y6R0 609 aa16.98■□□□□ 0.31
SEC13-213ENST00000445064 ANHXE9PGG2 379 aa16.97■□□□□ 0.31
SEC13-213ENST00000445064 HNRNPA1P09651 372 aaKnown RBP eCLIP16.97■□□□□ 0.31
SEC13-213ENST00000445064 FGFR3P22607 806 aa16.97■□□□□ 0.31
SEC13-213ENST00000445064 NPTX2P47972 431 aa16.97■□□□□ 0.31
SEC13-213ENST00000445064 OSTNP61366 133 aa16.97■□□□□ 0.31
SEC13-213ENST00000445064 HTR4Q13639 388 aa16.97■□□□□ 0.31
SEC13-213ENST00000445064 RAB33AQ14088 237 aa16.97■□□□□ 0.31
SEC13-213ENST00000445064 ANGPT1Q15389 498 aa16.97■□□□□ 0.31
SEC13-213ENST00000445064 IL17AQ16552 155 aa16.97■□□□□ 0.31
SEC13-213ENST00000445064 PDXDC1Q6P996 788 aa16.97■□□□□ 0.31
SEC13-213ENST00000445064 CD300LGQ6UXG3 332 aa16.97■□□□□ 0.31
SEC13-213ENST00000445064 RSPO2Q6UXX9 243 aaPredicted RBP16.97■□□□□ 0.31
SEC13-213ENST00000445064 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.97■□□□□ 0.31
SEC13-213ENST00000445064 DAW1Q8N136 415 aa16.97■□□□□ 0.31
SEC13-213ENST00000445064 ACO2Q99798 780 aaKnown RBP16.97■□□□□ 0.31
SEC13-213ENST00000445064 DNM3Q9UQ16 869 aa16.97■□□□□ 0.31
SEC13-213ENST00000445064 STK24Q9Y6E0 443 aa16.97■□□□□ 0.31
SEC13-213ENST00000445064 SMIM28A0A1B0GU29 152 aa16.96■□□□□ 0.31
SEC13-213ENST00000445064 PRR23AA6NEV1 266 aa16.96■□□□□ 0.31
SEC13-213ENST00000445064 SFI1A8K8P3 1242 aa16.96■□□□□ 0.31
SEC13-213ENST00000445064 TMEM189-UBE2V1I3L0A0 370 aa16.96■□□□□ 0.31
SEC13-213ENST00000445064 I3L4J1 428 aa16.96■□□□□ 0.31
SEC13-213ENST00000445064 HIP1RO75146 1068 aa16.96■□□□□ 0.31
SEC13-213ENST00000445064 RFX1P22670 979 aa16.96■□□□□ 0.31
SEC13-213ENST00000445064 BRCC3P46736 316 aa16.96■□□□□ 0.31
SEC13-213ENST00000445064 UPP1Q16831 310 aa16.96■□□□□ 0.31
SEC13-213ENST00000445064 AXDND1Q5T1B0 1012 aaPredicted RBP16.96■□□□□ 0.31
SEC13-213ENST00000445064 PARM1Q6UWI2 310 aa16.96■□□□□ 0.31
SEC13-213ENST00000445064 C3orf58Q8NDZ4 430 aa16.96■□□□□ 0.31
SEC13-213ENST00000445064 SLC7A14Q8TBB6 771 aa16.96■□□□□ 0.31
SEC13-213ENST00000445064 FGF14Q92915 247 aa16.96■□□□□ 0.31
SEC13-213ENST00000445064 TARS2Q9BW92 718 aaKnown RBP16.96■□□□□ 0.31
SEC13-213ENST00000445064 RAB34Q9BZG1 259 aa16.96■□□□□ 0.31
SEC13-213ENST00000445064 TBC1D17Q9HA65 648 aa16.96■□□□□ 0.31
SEC13-213ENST00000445064 MTRRQ9UBK8 725 aa16.96■□□□□ 0.31
SEC13-213ENST00000445064 DOCK8Q8NF50 2099 aa16.95■□□□□ 0.3
SEC13-213ENST00000445064 TKTP29401 623 aaKnown RBP16.95■□□□□ 0.3
SEC13-213ENST00000445064 HOXA9P31269 272 aa16.95■□□□□ 0.3
SEC13-213ENST00000445064 GRM5P41594 1212 aa16.95■□□□□ 0.3
SEC13-213ENST00000445064 YARSP54577 528 aaKnown RBP16.95■□□□□ 0.3
SEC13-213ENST00000445064 SOX4Q06945 474 aaPredicted RBP16.95■□□□□ 0.3
SEC13-213ENST00000445064 KRT79Q5XKE5 535 aa16.95■□□□□ 0.3
SEC13-213ENST00000445064 RINT1Q6NUQ1 792 aa16.95■□□□□ 0.3
SEC13-213ENST00000445064 ALKAL1Q6UXT8 129 aa16.95■□□□□ 0.3
SEC13-213ENST00000445064 TAS1R3Q7RTX0 852 aa16.95■□□□□ 0.3
SEC13-213ENST00000445064 KCNK18Q7Z418 384 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms