RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 PSMD5Q16401 504 aa16.02■□□□□ 0.16
SYNCRIP-203ENST00000444272 PRSS36Q5K4E3 855 aa16.02■□□□□ 0.16
SYNCRIP-203ENST00000444272 MIS18BP1Q6P0N0 1132 aa16.02■□□□□ 0.16
SYNCRIP-203ENST00000444272 MRPL10Q7Z7H8 261 aaKnown RBP16.02■□□□□ 0.16
SYNCRIP-203ENST00000444272 RALGPS2Q86X27 583 aaPredicted RBP16.02■□□□□ 0.16
SYNCRIP-203ENST00000444272 MFSD6LQ8IWD5 586 aa16.02■□□□□ 0.16
SYNCRIP-203ENST00000444272 ZSWIM3Q96MP5 696 aa16.02■□□□□ 0.16
SYNCRIP-203ENST00000444272 LY9Q9HBG7 655 aa16.02■□□□□ 0.16
SYNCRIP-203ENST00000444272 AGO4Q9HCK5 861 aaKnown RBP16.02■□□□□ 0.16
SYNCRIP-203ENST00000444272 AVENQ9NQS1 362 aaPredicted RBP16.02■□□□□ 0.16
SYNCRIP-203ENST00000444272 MBD1Q9UIS9 605 aaPredicted RBP16.02■□□□□ 0.16
SYNCRIP-203ENST00000444272 KIF26AQ9ULI4 1882 aaPredicted RBP16.01■□□□□ 0.15
SYNCRIP-203ENST00000444272 COL6A6A6NMZ7 2263 aa16.01■□□□□ 0.15
SYNCRIP-203ENST00000444272 A0A087WZ62 844 aa16.01■□□□□ 0.15
SYNCRIP-203ENST00000444272 ITPKBP27987 946 aa16.01■□□□□ 0.15
SYNCRIP-203ENST00000444272 DHPSP49366 369 aaPredicted RBP16.01■□□□□ 0.15
SYNCRIP-203ENST00000444272 UBE2SQ16763 222 aa16.01■□□□□ 0.15
SYNCRIP-203ENST00000444272 PDXDC1Q6P996 788 aa16.01■□□□□ 0.15
SYNCRIP-203ENST00000444272 CATSPER4Q7RTX7 472 aa16.01■□□□□ 0.15
SYNCRIP-203ENST00000444272 YAF2Q8IY57 180 aa16.01■□□□□ 0.15
SYNCRIP-203ENST00000444272 SPATA18Q8TC71 538 aa16.01■□□□□ 0.15
SYNCRIP-203ENST00000444272 RABGGTAQ92696 567 aa16.01■□□□□ 0.15
SYNCRIP-203ENST00000444272 FCRL3Q96P31 734 aaPredicted RBP16.01■□□□□ 0.15
SYNCRIP-203ENST00000444272 FDXACB1Q9BRP7 624 aaPredicted RBP16.01■□□□□ 0.15
SYNCRIP-203ENST00000444272 ZSWIM5Q9P217 1185 aa16.01■□□□□ 0.15
SYNCRIP-203ENST00000444272 MAFBQ9Y5Q3 323 aaPredicted RBP16.01■□□□□ 0.15
SYNCRIP-203ENST00000444272 NBPF19A0A087WUL8 3843 aa16■□□□□ 0.15
SYNCRIP-203ENST00000444272 SPDYE3A6NKU9 549 aa16■□□□□ 0.15
SYNCRIP-203ENST00000444272 HEPACAM2A8MVW5 462 aa16■□□□□ 0.15
SYNCRIP-203ENST00000444272 ATG13O75143 517 aa16■□□□□ 0.15
SYNCRIP-203ENST00000444272 PTPN2P17706 415 aa16■□□□□ 0.15
SYNCRIP-203ENST00000444272 SCNN1GP51170 649 aa16■□□□□ 0.15
SYNCRIP-203ENST00000444272 DRP2Q13474 957 aa16■□□□□ 0.15
SYNCRIP-203ENST00000444272 TRIP6Q15654 476 aaKnown RBP16■□□□□ 0.15
SYNCRIP-203ENST00000444272 CEP57Q86XR8 500 aa16■□□□□ 0.15
SYNCRIP-203ENST00000444272 LNX1Q8TBB1 728 aaPredicted RBP16■□□□□ 0.15
SYNCRIP-203ENST00000444272 PANK1Q8TE04 598 aa16■□□□□ 0.15
SYNCRIP-203ENST00000444272 ZMYM2Q9UBW7 1377 aa16■□□□□ 0.15
SYNCRIP-203ENST00000444272 MLH1P40692 756 aa15.99■□□□□ 0.15
SYNCRIP-203ENST00000444272 ATXN3P54252 364 aaPredicted RBP15.99■□□□□ 0.15
SYNCRIP-203ENST00000444272 HNRNPDQ14103 355 aaKnown RBP15.99■□□□□ 0.15
SYNCRIP-203ENST00000444272 GRM4Q14833 912 aa15.99■□□□□ 0.15
SYNCRIP-203ENST00000444272 PCSK4Q6UW60 755 aa15.99■□□□□ 0.15
SYNCRIP-203ENST00000444272 CAMK1GQ96NX5 476 aa15.99■□□□□ 0.15
SYNCRIP-203ENST00000444272 GAD1Q99259 594 aa15.99■□□□□ 0.15
SYNCRIP-203ENST00000444272 CORO1BQ9BR76 489 aa15.99■□□□□ 0.15
SYNCRIP-203ENST00000444272 UBAC1Q9BSL1 405 aa15.99■□□□□ 0.15
SYNCRIP-203ENST00000444272 HELLSQ9NRZ9 838 aa15.99■□□□□ 0.15
SYNCRIP-203ENST00000444272 MIOSQ9NXC5 875 aa15.99■□□□□ 0.15
SYNCRIP-203ENST00000444272 GTSE1Q9NYZ3 720 aa15.99■□□□□ 0.15
SYNCRIP-203ENST00000444272 PCDHA6Q9UN73 950 aa15.99■□□□□ 0.15
SYNCRIP-203ENST00000444272 PCDHA8Q9Y5H6 950 aa15.99■□□□□ 0.15
SYNCRIP-203ENST00000444272 MUC22E2RYF6 1773 aaPredicted RBP15.99■□□□□ 0.15
SYNCRIP-203ENST00000444272 COL5A1P20908 1838 aaPredicted RBP15.98■□□□□ 0.15
SYNCRIP-203ENST00000444272 TSC2P49815 1807 aa15.98■□□□□ 0.15
SYNCRIP-203ENST00000444272 ARL5CA6NH57 179 aa15.98■□□□□ 0.15
SYNCRIP-203ENST00000444272 CHADO15335 359 aa15.98■□□□□ 0.15
SYNCRIP-203ENST00000444272 TADA2AO75478 443 aa15.98■□□□□ 0.15
SYNCRIP-203ENST00000444272 CCR2P41597 374 aa15.98■□□□□ 0.15
SYNCRIP-203ENST00000444272 NT5C2P49902 561 aa15.98■□□□□ 0.15
SYNCRIP-203ENST00000444272 DOPEY1Q5JWR5 2465 aa15.98■□□□□ 0.15
SYNCRIP-203ENST00000444272 ZSCAN18Q8TBC5 510 aaPredicted RBP15.98■□□□□ 0.15
SYNCRIP-203ENST00000444272 PI4K2BQ8TCG2 481 aa15.98■□□□□ 0.15
SYNCRIP-203ENST00000444272 TTPALQ9BTX7 342 aa15.98■□□□□ 0.15
SYNCRIP-203ENST00000444272 GTPBP2Q9BX10 602 aaKnown RBP15.98■□□□□ 0.15
SYNCRIP-203ENST00000444272 INO80BQ9C086 356 aaPredicted RBP15.98■□□□□ 0.15
SYNCRIP-203ENST00000444272 FSCN3Q9NQT6 498 aa15.98■□□□□ 0.15
SYNCRIP-203ENST00000444272 AGPAT5Q9NUQ2 364 aa15.98■□□□□ 0.15
SYNCRIP-203ENST00000444272 PI4KAP42356 2102 aa15.98■□□□□ 0.15
SYNCRIP-203ENST00000444272 PTPRQQ9UMZ3 2332 aa15.97■□□□□ 0.15
SYNCRIP-203ENST00000444272 SF3B1O75533 1304 aaKnown RBP eCLIP15.97■□□□□ 0.155e-6■■■■■ 38.8
SYNCRIP-203ENST00000444272 TNRC6BQ9UPQ9 1833 aaKnown RBP15.97■□□□□ 0.15
SYNCRIP-203ENST00000444272 ZNF213O14771 459 aa15.97■□□□□ 0.15
SYNCRIP-203ENST00000444272 ITGA4P13612 1032 aa15.97■□□□□ 0.15
SYNCRIP-203ENST00000444272 BCKDHBP21953 392 aa15.97■□□□□ 0.15
SYNCRIP-203ENST00000444272 COLEC12Q5KU26 742 aa15.97■□□□□ 0.15
SYNCRIP-203ENST00000444272 HASPINQ8TF76 798 aa15.97■□□□□ 0.15
SYNCRIP-203ENST00000444272 RSPRY1Q96DX4 576 aa15.97■□□□□ 0.15
SYNCRIP-203ENST00000444272 FAM227BQ96M60 508 aa15.97■□□□□ 0.15
SYNCRIP-203ENST00000444272 ZFP42Q96MM3 310 aa15.97■□□□□ 0.15
SYNCRIP-203ENST00000444272 PSTPIP2Q9H939 334 aa15.97■□□□□ 0.15
SYNCRIP-203ENST00000444272 PCDHB9Q9Y5E1 797 aa15.97■□□□□ 0.15
SYNCRIP-203ENST00000444272 UBR5O95071 2799 aaPredicted RBP15.97■□□□□ 0.15
SYNCRIP-203ENST00000444272 A0A0D9SFI3 127 aa15.96■□□□□ 0.15
SYNCRIP-203ENST00000444272 TRABD2BA6NFA1 517 aa15.96■□□□□ 0.15
SYNCRIP-203ENST00000444272 ZNF197O14709 1029 aa15.96■□□□□ 0.15
SYNCRIP-203ENST00000444272 OPHN1O60890 802 aa15.96■□□□□ 0.15
SYNCRIP-203ENST00000444272 LRG1P02750 347 aa15.96■□□□□ 0.15
SYNCRIP-203ENST00000444272 OR1D2P34982 312 aa15.96■□□□□ 0.15
SYNCRIP-203ENST00000444272 DGKEP52429 567 aa15.96■□□□□ 0.15
SYNCRIP-203ENST00000444272 RAB33AQ14088 237 aa15.96■□□□□ 0.15
SYNCRIP-203ENST00000444272 MAPK6Q16659 721 aa15.96■□□□□ 0.15
SYNCRIP-203ENST00000444272 UBXN11Q5T124 520 aa15.96■□□□□ 0.15
SYNCRIP-203ENST00000444272 FAM171A1Q5VUB5 890 aa15.96■□□□□ 0.15
SYNCRIP-203ENST00000444272 PDZD4Q76G19 769 aaPredicted RBP15.96■□□□□ 0.15
SYNCRIP-203ENST00000444272 RTL10Q7L3V2 364 aa15.96■□□□□ 0.15
SYNCRIP-203ENST00000444272 ZNF589Q86UQ0 364 aaPredicted RBP15.96■□□□□ 0.15
SYNCRIP-203ENST00000444272 C11orf74Q86VG3 221 aa15.96■□□□□ 0.15
SYNCRIP-203ENST00000444272 MARCH9Q86YJ5 346 aa15.96■□□□□ 0.15
SYNCRIP-203ENST00000444272 ARID3AQ99856 593 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms