RNA–Protein interactions for RNA: ENST00000443247.1

AC003001.1-201, humanhuman

TSL 5 BASIC

Gene AC003001.1, Length 1,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003001.1-201ENST00000443247 MGAT1P26572 445 aa5.84□□□□□ -1.47
AC003001.1-201ENST00000443247 CLRN1P58418 232 aa5.84□□□□□ -1.47
AC003001.1-201ENST00000443247 NHLH2Q02577 135 aa5.84□□□□□ -1.47
AC003001.1-201ENST00000443247 ATXN7L2Q5T6C5 722 aaPredicted RBP5.84□□□□□ -1.47
AC003001.1-201ENST00000443247 CCHCR1Q8TD31 782 aa5.84□□□□□ -1.47
AC003001.1-201ENST00000443247 C7orf25Q9BPX7 421 aa5.84□□□□□ -1.47
AC003001.1-201ENST00000443247 MRI1Q9BV20 369 aa5.84□□□□□ -1.47
AC003001.1-201ENST00000443247 ZNF768Q9H5H4 540 aaKnown RBP5.84□□□□□ -1.47
AC003001.1-201ENST00000443247 NRDE2Q9H7Z3 1164 aa5.84□□□□□ -1.47
AC003001.1-201ENST00000443247 MOCS1Q9NZB8 636 aa5.84□□□□□ -1.47
AC003001.1-201ENST00000443247 TRPM5Q9NZQ8 1165 aa5.84□□□□□ -1.47
AC003001.1-201ENST00000443247 SAP30BPQ9UHR5 308 aaKnown RBP5.84□□□□□ -1.47
AC003001.1-201ENST00000443247 NOP58Q9Y2X3 529 aaKnown RBP5.84□□□□□ -1.47
AC003001.1-201ENST00000443247 AHRRA9YTQ3 701 aa5.83□□□□□ -1.48
AC003001.1-201ENST00000443247 SLPIP03973 132 aa5.83□□□□□ -1.48
AC003001.1-201ENST00000443247 PCSK1P29120 753 aa5.83□□□□□ -1.48
AC003001.1-201ENST00000443247 MCM7P33993 719 aa5.83□□□□□ -1.48
AC003001.1-201ENST00000443247 SLC16A1P53985 500 aa5.83□□□□□ -1.48
AC003001.1-201ENST00000443247 RNASE9P60153 205 aaKnown RBP5.83□□□□□ -1.48
AC003001.1-201ENST00000443247 KRT85P78386 507 aa5.83□□□□□ -1.48
AC003001.1-201ENST00000443247 KLF10Q13118 480 aa5.83□□□□□ -1.48
AC003001.1-201ENST00000443247 BRDTQ58F21 947 aaPredicted RBP5.83□□□□□ -1.48
AC003001.1-201ENST00000443247 RRP12Q5JTH9 1297 aaKnown RBP5.83□□□□□ -1.48
AC003001.1-201ENST00000443247 MIGA2Q7L4E1 593 aa5.83□□□□□ -1.48
AC003001.1-201ENST00000443247 GDF7Q7Z4P5 450 aa5.83□□□□□ -1.48
AC003001.1-201ENST00000443247 RHOT1Q8IXI2 618 aa5.83□□□□□ -1.48
AC003001.1-201ENST00000443247 CASKIN2Q8WXE0 1202 aa5.83□□□□□ -1.48
AC003001.1-201ENST00000443247 CLIP3Q96DZ5 547 aa5.83□□□□□ -1.48
AC003001.1-201ENST00000443247 PCED1AQ9H1Q7 454 aa5.83□□□□□ -1.48
AC003001.1-201ENST00000443247 MANSC1Q9H8J5 431 aa5.83□□□□□ -1.48
AC003001.1-201ENST00000443247 GPRC5BQ9NZH0 403 aa5.83□□□□□ -1.48
AC003001.1-201ENST00000443247 RUVBL1Q9Y265 456 aaKnown RBP5.83□□□□□ -1.48
AC003001.1-201ENST00000443247 ACTL7AQ9Y615 435 aa5.83□□□□□ -1.48
AC003001.1-201ENST00000443247 hCG_2014768A0A024R1R8 64 aa5.82□□□□□ -1.48
AC003001.1-201ENST00000443247 AMY1AP04745 511 aa5.82□□□□□ -1.48
AC003001.1-201ENST00000443247 ADH4P08319 380 aa5.82□□□□□ -1.48
AC003001.1-201ENST00000443247 ATP5JP18859 108 aa5.82□□□□□ -1.48
AC003001.1-201ENST00000443247 MAKP20794 623 aa5.82□□□□□ -1.48
AC003001.1-201ENST00000443247 NR4A1P22736 598 aa5.82□□□□□ -1.48
AC003001.1-201ENST00000443247 PTGS2P35354 604 aa5.82□□□□□ -1.48
AC003001.1-201ENST00000443247 WASP42768 502 aa5.82□□□□□ -1.48
AC003001.1-201ENST00000443247 CHN2P52757 468 aa5.82□□□□□ -1.48
AC003001.1-201ENST00000443247 HMGA2P52926 109 aa5.82□□□□□ -1.48
AC003001.1-201ENST00000443247 KIF23Q02241 960 aaPredicted RBP5.82□□□□□ -1.48
AC003001.1-201ENST00000443247 RPUSD2Q8IZ73 545 aaKnown RBP5.82□□□□□ -1.48
AC003001.1-201ENST00000443247 ZGPATQ8N5A5 531 aaKnown RBP5.82□□□□□ -1.48
AC003001.1-201ENST00000443247 RAB24Q969Q5 203 aa5.82□□□□□ -1.48
AC003001.1-201ENST00000443247 CYFIP2Q96F07 1278 aa5.82□□□□□ -1.48
AC003001.1-201ENST00000443247 PHACTR3Q96KR7 559 aa5.82□□□□□ -1.48
AC003001.1-201ENST00000443247 DCLRE1CQ96SD1 692 aaKnown RBP5.82□□□□□ -1.48
AC003001.1-201ENST00000443247 MRIQ9BWK5 157 aa5.82□□□□□ -1.48
AC003001.1-201ENST00000443247 ING1Q9UK53 422 aaPredicted RBP5.82□□□□□ -1.48
AC003001.1-201ENST00000443247 CHST2Q9Y4C5 530 aa5.82□□□□□ -1.48
AC003001.1-201ENST00000443247 PNPLA7Q6ZV29 1317 aa5.81□□□□□ -1.48
AC003001.1-201ENST00000443247 MYBBP1AQ9BQG0 1328 aaKnown RBP5.81□□□□□ -1.48
AC003001.1-201ENST00000443247 TEX33O43247 280 aa5.81□□□□□ -1.48
AC003001.1-201ENST00000443247 ZSCAN20P17040 1043 aaPredicted RBP5.81□□□□□ -1.48
AC003001.1-201ENST00000443247 CCND1P24385 295 aa5.81□□□□□ -1.48
AC003001.1-201ENST00000443247 FAM189BP81408 668 aa5.81□□□□□ -1.48
AC003001.1-201ENST00000443247 MTM1Q13496 603 aa5.81□□□□□ -1.48
AC003001.1-201ENST00000443247 ODF1Q14990 250 aa5.81□□□□□ -1.48
AC003001.1-201ENST00000443247 EFCAB2Q5VUJ9 269 aa5.81□□□□□ -1.48
AC003001.1-201ENST00000443247 ZNF529Q6P280 563 aa5.81□□□□□ -1.48
AC003001.1-201ENST00000443247 DRC7Q8IY82 874 aa5.81□□□□□ -1.48
AC003001.1-201ENST00000443247 SYNE4Q8N205 404 aa5.81□□□□□ -1.48
AC003001.1-201ENST00000443247 NEU4Q8WWR8 484 aaPredicted RBP5.81□□□□□ -1.48
AC003001.1-201ENST00000443247 HAS1Q92839 578 aa5.81□□□□□ -1.48
AC003001.1-201ENST00000443247 HDAC10Q969S8 669 aa5.81□□□□□ -1.48
AC003001.1-201ENST00000443247 MYOCQ99972 504 aa5.81□□□□□ -1.48
AC003001.1-201ENST00000443247 SLC46A2Q9BY10 475 aa5.81□□□□□ -1.48
AC003001.1-201ENST00000443247 TEX101Q9BY14 249 aa5.81□□□□□ -1.48
AC003001.1-201ENST00000443247 SLC13A1Q9BZW2 595 aa5.81□□□□□ -1.48
AC003001.1-201ENST00000443247 LOC105371045A0A1W2PR82 267 aa5.8□□□□□ -1.48
AC003001.1-201ENST00000443247 DRGXA6NNA5 263 aa5.8□□□□□ -1.48
AC003001.1-201ENST00000443247 DIRC3C9JPN6 131 aa5.8□□□□□ -1.48
AC003001.1-201ENST00000443247 ZNF185O15231 689 aa5.8□□□□□ -1.48
AC003001.1-201ENST00000443247 NCR1O76036 304 aa5.8□□□□□ -1.48
AC003001.1-201ENST00000443247 DDCP20711 480 aa5.8□□□□□ -1.48
AC003001.1-201ENST00000443247 ZFP36P26651 326 aaKnown RBP5.8□□□□□ -1.48
AC003001.1-201ENST00000443247 UAP1L1Q3KQV9 507 aa5.8□□□□□ -1.48
AC003001.1-201ENST00000443247 C3orf36Q3SXR2 165 aa5.8□□□□□ -1.48
AC003001.1-201ENST00000443247 PDCD4Q53EL6 469 aaKnown RBP5.8□□□□□ -1.48
AC003001.1-201ENST00000443247 OTUD7BQ6GQQ9 843 aa5.8□□□□□ -1.48
AC003001.1-201ENST00000443247 NEU1Q99519 415 aa5.8□□□□□ -1.48
AC003001.1-201ENST00000443247 TDP1Q9NUW8 608 aa5.8□□□□□ -1.48
AC003001.1-201ENST00000443247 SLC23A1Q9UHI7 598 aa5.8□□□□□ -1.48
AC003001.1-201ENST00000443247 SERPINB13Q9UIV8 391 aa5.8□□□□□ -1.48
AC003001.1-201ENST00000443247 LIMCH1Q9UPQ0 1083 aa5.8□□□□□ -1.48
AC003001.1-201ENST00000443247 USP15Q9Y4E8 981 aaPredicted RBP5.8□□□□□ -1.48
AC003001.1-201ENST00000443247 IPPQ9Y573 584 aa5.8□□□□□ -1.48
AC003001.1-201ENST00000443247 PCDHA13Q9Y5I0 950 aa5.8□□□□□ -1.48
AC003001.1-201ENST00000443247 CCDC154A6NI56 674 aa5.79□□□□□ -1.48
AC003001.1-201ENST00000443247 HTRA2O43464 458 aaPredicted RBP5.79□□□□□ -1.48
AC003001.1-201ENST00000443247 POMCP01189 267 aa5.79□□□□□ -1.48
AC003001.1-201ENST00000443247 ITGB1P05556 798 aa5.79□□□□□ -1.48
AC003001.1-201ENST00000443247 ANAPC15P60006 121 aa5.79□□□□□ -1.48
AC003001.1-201ENST00000443247 ATP8B2P98198 1209 aa5.79□□□□□ -1.48
AC003001.1-201ENST00000443247 TARDBPQ13148 414 aaKnown RBP eCLIP5.79□□□□□ -1.48
AC003001.1-201ENST00000443247 FHL2Q14192 279 aa5.79□□□□□ -1.48
AC003001.1-201ENST00000443247 FAM102AQ5T9C2 384 aaPredicted RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms