RNA–Protein interactions for RNA: ENST00000441024.6

CNOT1-202, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNOT1, Length 4,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-202ENST00000441024 HEMGNQ9BXL5 484 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 SLC8A2Q9UPR5 921 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.78□□□□□ -1.32
CNOT1-202ENST00000441024 ICAM1P05362 532 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 ELF1P32519 619 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 GTF2H1P32780 548 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 MAGEA9P43362 315 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 GRB10Q13322 594 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 BYSLQ13895 437 aaKnown RBP6.78□□□□□ -1.32
CNOT1-202ENST00000441024 KIAA1755Q5JYT7 1200 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 AGBL2Q5U5Z8 902 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 IZUMO3Q5VZ72 239 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 RAD9BQ6WBX8 426 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 CCNI2Q6ZMN8 369 aaPredicted RBP6.78□□□□□ -1.32
CNOT1-202ENST00000441024 USP49Q70CQ1 688 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 GDAP1Q8TB36 358 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 SLC35G2Q8TBE7 412 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 ANKRD7Q92527 254 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 MYBP10242 640 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 MAGOHP61326 146 aaKnown RBP6.78□□□□□ -1.32
CNOT1-202ENST00000441024 ZNF394Q53GI3 561 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 PPP6R3Q5H9R7 873 aaPredicted RBP6.78□□□□□ -1.32
CNOT1-202ENST00000441024 HEATR6Q6AI08 1181 aaKnown RBP6.78□□□□□ -1.32
CNOT1-202ENST00000441024 ZNF710Q8N1W2 664 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 SENP7Q9BQF6 1050 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 KATNAL1Q9BW62 490 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 TRAIPQ9BWF2 469 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 RTFDC1Q9BY42 306 aaPredicted RBP6.78□□□□□ -1.32
CNOT1-202ENST00000441024 TRIM15Q9C019 465 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 SMYD2Q9NRG4 433 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 KBTBD4Q9NVX7 518 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 RNF181Q9P0P0 153 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 TNS2Q63HR2 1409 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 SPECC1L-ADORA2AF8WAN1 911 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 APOL1O14791 398 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 TXNP10599 105 aaKnown RBP6.78□□□□□ -1.32
CNOT1-202ENST00000441024 PRLRP16471 622 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 CYP11B2P19099 503 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 CYP2C19P33261 490 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 SREBF1P36956 1147 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 NPEPPSP55786 919 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 FKBP1AP62942 108 aaKnown RBP6.78□□□□□ -1.32
CNOT1-202ENST00000441024 CENPCQ03188 943 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 PDCLQ13371 301 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 ZNF211Q13398 564 aaPredicted RBP6.78□□□□□ -1.32
CNOT1-202ENST00000441024 RCN2Q14257 317 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 NTRK3Q16288 839 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 Q3C1V9 767 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 HNRNPLLQ8WVV9 542 aaKnown RBP6.78□□□□□ -1.32
CNOT1-202ENST00000441024 ATP6V1E2Q96A05 226 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 C18orf8Q96DM3 657 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 OTUD5Q96G74 571 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 PPP1R2P1Q96PQ5 205 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 ELAC2Q9BQ52 826 aaKnown RBP6.78□□□□□ -1.32
CNOT1-202ENST00000441024 VPS33BQ9H267 617 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 RIOX1Q9H6W3 641 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 PACSIN2Q9UNF0 486 aaPredicted RBP6.78□□□□□ -1.32
CNOT1-202ENST00000441024 PCDHB2Q9Y5E7 798 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 BCL9O00512 1426 aa6.78□□□□□ -1.32
CNOT1-202ENST00000441024 A0A0G2JLW4 131 aa6.77□□□□□ -1.33
CNOT1-202ENST00000441024 HNRNPCL1O60812 293 aaKnown RBP6.77□□□□□ -1.33
CNOT1-202ENST00000441024 HSPA4LO95757 839 aa6.77□□□□□ -1.33
CNOT1-202ENST00000441024 GPS1Q13098 491 aa6.77□□□□□ -1.33
CNOT1-202ENST00000441024 FAM133BQ5BKY9 247 aaKnown RBP6.77□□□□□ -1.33
CNOT1-202ENST00000441024 NLRP14Q86W24 1093 aa6.77□□□□□ -1.33
CNOT1-202ENST00000441024 CATSPER3Q86XQ3 398 aa6.77□□□□□ -1.33
CNOT1-202ENST00000441024 RNF149Q8NC42 400 aa6.77□□□□□ -1.33
CNOT1-202ENST00000441024 KIF12Q96FN5 646 aa6.77□□□□□ -1.33
CNOT1-202ENST00000441024 PPP1R16BQ96T49 567 aa6.77□□□□□ -1.33
CNOT1-202ENST00000441024 FUCA2Q9BTY2 467 aa6.77□□□□□ -1.33
CNOT1-202ENST00000441024 FRMD8P1Q9BZ68 369 aaPredicted RBP6.77□□□□□ -1.33
CNOT1-202ENST00000441024 DRC3Q9H069 523 aa6.77□□□□□ -1.33
CNOT1-202ENST00000441024 FBXL5Q9UKA1 691 aa6.77□□□□□ -1.33
CNOT1-202ENST00000441024 PPME1Q9Y570 386 aa6.77□□□□□ -1.33
CNOT1-202ENST00000441024 FAM205AQ6ZU69 1335 aa6.77□□□□□ -1.33
CNOT1-202ENST00000441024 CFAP73A6NFT4 308 aa6.77□□□□□ -1.33
CNOT1-202ENST00000441024 A8MXQ7 604 aa6.77□□□□□ -1.33
CNOT1-202ENST00000441024 PPP1R12AO14974 1030 aaPredicted RBP6.77□□□□□ -1.33
CNOT1-202ENST00000441024 OPHN1O60890 802 aa6.77□□□□□ -1.33
CNOT1-202ENST00000441024 SKIP12755 728 aa6.77□□□□□ -1.33
CNOT1-202ENST00000441024 KRT17Q04695 432 aa6.77□□□□□ -1.33
CNOT1-202ENST00000441024 SNAPC2Q13487 334 aa6.77□□□□□ -1.33
CNOT1-202ENST00000441024 FAM102AQ5T9C2 384 aaPredicted RBP6.77□□□□□ -1.33
CNOT1-202ENST00000441024 KIRREL3Q8IZU9 778 aa6.77□□□□□ -1.33
CNOT1-202ENST00000441024 MICAL1Q8TDZ2 1067 aa6.77□□□□□ -1.33
CNOT1-202ENST00000441024 LRRC1Q9BTT6 524 aa6.77□□□□□ -1.33
CNOT1-202ENST00000441024 ROPN1BQ9BZX4 212 aaPredicted RBP6.77□□□□□ -1.33
CNOT1-202ENST00000441024 ROPN1Q9HAT0 212 aaPredicted RBP6.77□□□□□ -1.33
CNOT1-202ENST00000441024 MYOZ2Q9NPC6 264 aa6.77□□□□□ -1.33
CNOT1-202ENST00000441024 AGPAT5Q9NUQ2 364 aa6.77□□□□□ -1.33
CNOT1-202ENST00000441024 PRMT7Q9NVM4 692 aaPredicted RBP6.77□□□□□ -1.33
CNOT1-202ENST00000441024 BFARQ9NZS9 450 aa6.77□□□□□ -1.33
CNOT1-202ENST00000441024 SYNPO2Q9UMS6 1093 aa6.77□□□□□ -1.33
CNOT1-202ENST00000441024 SMG5Q9UPR3 1016 aaKnown RBP6.77□□□□□ -1.33
CNOT1-202ENST00000441024 COL5A2P05997 1499 aaPredicted RBP6.77□□□□□ -1.33
CNOT1-202ENST00000441024 MSH4O15457 936 aa6.77□□□□□ -1.33
CNOT1-202ENST00000441024 MAP3K7O43318 606 aa6.77□□□□□ -1.33
CNOT1-202ENST00000441024 HBP1O60381 514 aa6.77□□□□□ -1.33
CNOT1-202ENST00000441024 ZC3H11AO75152 810 aaKnown RBP eCLIP6.77□□□□□ -1.33
CNOT1-202ENST00000441024 CD4P01730 458 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms