RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 KCNMB3Q9NPA1 279 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 CYP26B1Q9NR63 512 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 BLOC1S4Q9NUP1 217 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 KLK14Q9P0G3 267 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 VAV3Q9UKW4 847 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 SIK3Q9Y2K2 1263 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 JRKLQ9Y4A0 524 aa5.17□□□□□ -1.58
EDEM3-203ENST00000439962 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.16□□□□□ -1.58
EDEM3-203ENST00000439962 PITPNM1O00562 1244 aa5.16□□□□□ -1.58
EDEM3-203ENST00000439962 C22orf31O95567 290 aa5.16□□□□□ -1.58
EDEM3-203ENST00000439962 P4HBP07237 508 aaKnown RBP5.16□□□□□ -1.58
EDEM3-203ENST00000439962 TCP1P17987 556 aaKnown RBP5.16□□□□□ -1.58
EDEM3-203ENST00000439962 MTIF2P46199 727 aaKnown RBP5.16□□□□□ -1.58
EDEM3-203ENST00000439962 AFF1P51825 1210 aaKnown RBP5.16□□□□□ -1.58
EDEM3-203ENST00000439962 JAK3P52333 1124 aa5.16□□□□□ -1.58
EDEM3-203ENST00000439962 FKBP3Q00688 224 aaKnown RBP5.16□□□□□ -1.58
EDEM3-203ENST00000439962 BTG3Q14201 252 aaPredicted RBP5.16□□□□□ -1.58
EDEM3-203ENST00000439962 SPA17Q15506 151 aa5.16□□□□□ -1.58
EDEM3-203ENST00000439962 BMT2Q1RMZ1 405 aa5.16□□□□□ -1.58
EDEM3-203ENST00000439962 FBXO47Q5MNV8 452 aa5.16□□□□□ -1.58
EDEM3-203ENST00000439962 DYMQ7RTS9 669 aa5.16□□□□□ -1.58
EDEM3-203ENST00000439962 HERC6Q8IVU3 1022 aa5.16□□□□□ -1.58
EDEM3-203ENST00000439962 TMEM130Q8N3G9 435 aa5.16□□□□□ -1.58
EDEM3-203ENST00000439962 USP38Q8NB14 1042 aa5.16□□□□□ -1.58
EDEM3-203ENST00000439962 BBXQ8WY36 941 aaPredicted RBP5.16□□□□□ -1.58
EDEM3-203ENST00000439962 SEPT8Q92599 483 aa5.16□□□□□ -1.58
EDEM3-203ENST00000439962 EXOC4Q96A65 974 aa5.16□□□□□ -1.58
EDEM3-203ENST00000439962 GUCD1Q96NT3 240 aa5.16□□□□□ -1.58
EDEM3-203ENST00000439962 PNMA5Q96PV4 448 aa5.16□□□□□ -1.58
EDEM3-203ENST00000439962 RIT2Q99578 217 aa5.16□□□□□ -1.58
EDEM3-203ENST00000439962 FUT8Q9BYC5 575 aa5.16□□□□□ -1.58
EDEM3-203ENST00000439962 PARD6BQ9BYG5 372 aa5.16□□□□□ -1.58
EDEM3-203ENST00000439962 CELF4Q9BZC1 486 aaKnown RBP5.16□□□□□ -1.58
EDEM3-203ENST00000439962 ZMYND15Q9H091 742 aa5.16□□□□□ -1.58
EDEM3-203ENST00000439962 PRO3102Q9H379 93 aa5.16□□□□□ -1.58
EDEM3-203ENST00000439962 KCND2Q9NZV8 630 aa5.16□□□□□ -1.58
EDEM3-203ENST00000439962 CEP72Q9P209 647 aa5.16□□□□□ -1.58
EDEM3-203ENST00000439962 MAFBQ9Y5Q3 323 aaPredicted RBP5.16□□□□□ -1.58
EDEM3-203ENST00000439962 BZW2Q9Y6E2 419 aaKnown RBP5.16□□□□□ -1.58
EDEM3-203ENST00000439962 NFASCO94856 1347 aa5.16□□□□□ -1.58
EDEM3-203ENST00000439962 GTPBP10A4D1E9 387 aaKnown RBP5.16□□□□□ -1.58
EDEM3-203ENST00000439962 TBKBP1A7MCY6 615 aa5.16□□□□□ -1.58
EDEM3-203ENST00000439962 C2CD2LO14523 706 aa5.16□□□□□ -1.58
EDEM3-203ENST00000439962 PER2O15055 1255 aa5.16□□□□□ -1.58
EDEM3-203ENST00000439962 SLC16A3O15427 465 aaKnown RBP5.16□□□□□ -1.58
EDEM3-203ENST00000439962 B4GALT5O43286 388 aa5.16□□□□□ -1.58
EDEM3-203ENST00000439962 KRT18P05783 430 aaKnown RBP5.16□□□□□ -1.58
EDEM3-203ENST00000439962 TRIM21P19474 475 aaKnown RBP5.16□□□□□ -1.58
EDEM3-203ENST00000439962 AKAP5P24588 427 aa5.16□□□□□ -1.58
EDEM3-203ENST00000439962 MATR3P43243 847 aaKnown RBP eCLIP5.16□□□□□ -1.58
EDEM3-203ENST00000439962 PLA2G4AP47712 749 aa5.16□□□□□ -1.58
EDEM3-203ENST00000439962 AARSP49588 968 aaKnown RBP eCLIP5.16□□□□□ -1.58
EDEM3-203ENST00000439962 KIF5AQ12840 1032 aa5.16□□□□□ -1.58
EDEM3-203ENST00000439962 XKR3Q5GH77 459 aa5.16□□□□□ -1.58
EDEM3-203ENST00000439962 ANKRD40Q6AI12 368 aa5.16□□□□□ -1.58
EDEM3-203ENST00000439962 TAF2Q6P1X5 1199 aa5.16□□□□□ -1.58
EDEM3-203ENST00000439962 WDR59Q6PJI9 974 aa5.16□□□□□ -1.58
EDEM3-203ENST00000439962 PLPPR4Q7Z2D5 763 aa5.16□□□□□ -1.58
EDEM3-203ENST00000439962 KCNK18Q7Z418 384 aa5.16□□□□□ -1.58
EDEM3-203ENST00000439962 SMYD4Q8IYR2 804 aaPredicted RBP5.16□□□□□ -1.58
EDEM3-203ENST00000439962 SLC35F6Q8N357 371 aa5.16□□□□□ -1.58
EDEM3-203ENST00000439962 MMGT1Q8N4V1 131 aa5.16□□□□□ -1.58
EDEM3-203ENST00000439962 KIAA0895Q8NCT3 520 aa5.16□□□□□ -1.58
EDEM3-203ENST00000439962 HASPINQ8TF76 798 aa5.16□□□□□ -1.58
EDEM3-203ENST00000439962 JAKMIP2Q96AA8 810 aa5.16□□□□□ -1.58
EDEM3-203ENST00000439962 ALS2CR12Q96Q35 445 aa5.16□□□□□ -1.58
EDEM3-203ENST00000439962 NDST4Q9H3R1 872 aa5.16□□□□□ -1.58
EDEM3-203ENST00000439962 ZSWIM4Q9H7M6 989 aa5.16□□□□□ -1.58
EDEM3-203ENST00000439962 MTMR10Q9NXD2 777 aa5.16□□□□□ -1.58
EDEM3-203ENST00000439962 SAR1BQ9Y6B6 198 aa5.16□□□□□ -1.58
EDEM3-203ENST00000439962 EMSYQ7Z589 1322 aa5.16□□□□□ -1.58
EDEM3-203ENST00000439962 PTPRZ1P23471 2315 aaPredicted RBP5.15□□□□□ -1.58
EDEM3-203ENST00000439962 TCF20Q9UGU0 1960 aaKnown RBP5.15□□□□□ -1.58
EDEM3-203ENST00000439962 GRID2IPA4D2P6 1211 aa5.15□□□□□ -1.58
EDEM3-203ENST00000439962 ARHGEF35A5YM69 484 aa5.15□□□□□ -1.58
EDEM3-203ENST00000439962 RRN3P2A6NIE6 340 aa5.15□□□□□ -1.58
EDEM3-203ENST00000439962 TTLL13PA6NNM8 815 aa5.15□□□□□ -1.58
EDEM3-203ENST00000439962 ZC3H11AO75152 810 aaKnown RBP eCLIP5.15□□□□□ -1.585e-7■■■□□ 16.2
EDEM3-203ENST00000439962 TACC1O75410 805 aa5.15□□□□□ -1.58
EDEM3-203ENST00000439962 POMCP01189 267 aa5.15□□□□□ -1.58
EDEM3-203ENST00000439962 GAP43P17677 238 aa5.15□□□□□ -1.58
EDEM3-203ENST00000439962 CASP1P29466 404 aa5.15□□□□□ -1.58
EDEM3-203ENST00000439962 SFNP31947 248 aa5.15□□□□□ -1.58
EDEM3-203ENST00000439962 CTNNB1P35222 781 aa5.15□□□□□ -1.58
EDEM3-203ENST00000439962 BCAR1P56945 870 aa5.15□□□□□ -1.58
EDEM3-203ENST00000439962 NNTQ13423 1086 aa5.15□□□□□ -1.58
EDEM3-203ENST00000439962 ADGRE1Q14246 886 aa5.15□□□□□ -1.58
EDEM3-203ENST00000439962 MYBPC2Q14324 1141 aa5.15□□□□□ -1.58
EDEM3-203ENST00000439962 EMC2Q15006 297 aa5.15□□□□□ -1.58
EDEM3-203ENST00000439962 LONRF2Q1L5Z9 754 aa5.15□□□□□ -1.58
EDEM3-203ENST00000439962 TRIM71Q2Q1W2 868 aaKnown RBP5.15□□□□□ -1.58
EDEM3-203ENST00000439962 BEND6Q5SZJ8 279 aaPredicted RBP5.15□□□□□ -1.58
EDEM3-203ENST00000439962 TRAF7Q6Q0C0 670 aa5.15□□□□□ -1.58
EDEM3-203ENST00000439962 LRRC55Q6ZSA7 311 aa5.15□□□□□ -1.58
EDEM3-203ENST00000439962 FRMD5Q7Z6J6 570 aa5.15□□□□□ -1.58
EDEM3-203ENST00000439962 ZBTB33Q86T24 672 aa5.15□□□□□ -1.58
EDEM3-203ENST00000439962 RTN4RL1Q86UN2 441 aaPredicted RBP5.15□□□□□ -1.58
EDEM3-203ENST00000439962 FAM228AQ86W67 206 aa5.15□□□□□ -1.58
EDEM3-203ENST00000439962 ABI1Q8IZP0 508 aa5.15□□□□□ -1.58
EDEM3-203ENST00000439962 FAM71BQ8TC56 605 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms